Cited by 38PI3K/AKT/mTOR signaling in cancerProtein Kinase Regulation and GTPase SignalingAutophagy in Disease and Therapy

Structural insight into the arginine-binding specificity of CASTOR1 in amino acid-dependent mTORC1 signaling

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Xia, Jing, Wang, Rong, Zhang, Tianlong, Ding, Jianping·2016·Cell Discovery

Abstract

The mechanistic Target Of Rapamycin Complex 1 (mTORC1) is central to the cellular response to changes in nutrient signals such as amino acids. CASTOR1 is shown to be an arginine sensor, which plays an important role in the activation of the mTORC1 pathway. In the deficiency of arginine, CASTOR1 interacts with GATOR2, which together with GATOR1 and Rag GTPases controls the relocalization of mTORC1 to lysosomes. The binding of arginine to CASTOR1 disrupts its association with GATOR2 and hence activates the mTORC1 signaling. Here, we report the crystal structure of CASTOR1 in complex with arginine at 2.5 Å resolution. CASTOR1 comprises of four tandem ACT domains with an architecture resembling the C-terminal allosteric domains of aspartate kinases. ACT1 and ACT3 adopt the typical βαββαβ topology and function in dimerization via the conserved residues from helices α1 of ACT1 and α5 of ACT3; whereas ACT 2 and ACT4, both comprising of two non-sequential regions, assume the unusual ββαββα topology and contribute an arginine-binding pocket at the interface. The bound arginine makes a number of hydrogen-bonding interactions and extensive hydrophobic contacts with the surrounding residues of the binding pocket. The functional roles of the key residues are validated by mutagenesis and biochemical assays. Our structural and functional data together reveal the molecular basis for the arginine-binding specificity of CASTOR1 in the arginine-dependent activation of the mTORC1 signaling.

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Crossref · 10.1038/celldisc.2016.35

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  • The crystal structure of the arginine-bound CASTOR1 homodimer revealed that each monomer contains four ACT domains, and arginine binds to each monomer in a deep cleft at the intramolecular ACT2/4 interface.

    “The crystal structure of the arginine-bound CASTOR1 homodimer (Gai et al., 2016b; Saxton et al., 2016a; Xia et al., 2016) revealed that each monomer contains four ACT domains (Fig. 2D), and arginine binds to each monomer in a deep cleft at the intramolecular ACT2/4 interface”

    From Signal integration in the (m)TORC1 growth pathway (2018) · cites this paper as Xia et al., 2016

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Research works printed but not linked: 2

  1. Kim E, Goraksha-Hicks P, Li L, Neufeld TP, Guan K-L. Regulation of TORC1 by Rag GTPases in nutrient response. Nat Cell Biol 2008; 10: 935–945. 18604198 PMC2711503
  2. Murshudov GN, Skubak P, Lebedev AA et al. REFMAC5 for the refinement of macromolecular crystal structures. Acta Crystallogr 2011; D67: 355–367. PMC3069751 21460454

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Authors
Xia, J., Wang, R., Zhang, T., & Ding, J.
Affiliations
  • Shanghai University (CN)
  • Chinese Academy of Sciences (CN)
Corresponding author
  • Zhang, Tianlong
  • Ding, Jianping
Venue
Cell Discovery
Published
2016-09-13
Volume
2
Issue
1
Pages
16035-16035
ISSN
2056-5968 (ISSN-L)
OpenAlex
W2519464319
Cited by
38
References
30
Citations by year
2026: 2 · 2025: 5 · 2024: 2 · 2023: 2 · 2022: 8 · 2021: 3 · 2020: 3 · 2019: 5 · 2018: 3 · 2017: 4 · 2016: 1
FWCI
2.25
Type
journal article
Language
en
Open access
Locations
  • Cell Discovery (publishedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
Funders
  • National Natural Science Foundation of China (31230017, 31370015)
  • Chinese Academy of Sciences (XDB08010302)
  • Youth Innovation Promotion Association
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › PI3K/AKT/mTOR signaling in cancer
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
  • Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
Keywords
mTORC1 signaling, amino acid sensing, GATOR2, ACT domain, crystal structure, allosteric regulation, Rag GTPases, protein dimerization, arginine deficiency

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