The DOI matches its Crossref record; 22 of the 22 references it cites were found in a registry or an index.
Systems metabolic engineering of Escherichia coli for L ‐threonine production
Open accessAbstract
Amino-acid producers have traditionally been developed by repeated random mutagenesis owing to the difficulty in rationally engineering the complex and highly regulated metabolic network. Here, we report the development of the genetically defined L-threonine overproducing Escherichia coli strain by systems metabolic engineering. Feedback inhibitions of aspartokinase I and III (encoded by thrA and lysC, respectively) and transcriptional attenuation regulations (located in thrL) were removed. Pathways for Thr degradation were removed by deleting tdh and mutating ilvA. The metA and lysA genes were deleted to make more precursors available for Thr biosynthesis. Further target genes to be engineered were identified by transcriptome profiling combined with in silico flux response analysis, and their expression levels were manipulated accordingly. The final engineered E. coli strain was able to produce Thr with a high yield of 0.393 g per gram of glucose, and 82.4 g/l Thr by fed-batch culture. The systems metabolic engineering strategy reported here may be broadly employed for developing genetically defined organisms for the efficient production of various bioproducts.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method
Livak, K. J., & Schmittgen, T. D. (2001) · Methods · doi:10.1006/meth.2001.1262 · Cited by 180,860
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
Datsenko, K. A., & Wanner, B. L. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.120163297 · Cited by 14,782
Escherichia coli and Salmonella :cellular and molecular biology
Neidhardt, F. C. (1996) · ASM Press eBooks · Cited by 8,197
A new efficient gene disruption cassette for repeated use in budding yeast
Guldener, U. (1996) · Nucleic Acids Research · doi:10.1093/nar/24.13.2519 · Cited by 1,656
An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)
Reed, J. L., Vo, T. D., Schilling, C. H., & Palsson, B. O. (2003) · Genome Biology · doi:10.1186/gb-2003-4-9-r54 · Cited by 999
Biotechnological production of amino acids and derivatives: current status and prospects
Leuchtenberger, W., Huthmacher, K., & Drauz, K. (2005) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-005-0155-y · Cited by 775
Park, J. H., Lee, K. H., Kim, T. Y., & Lee, S. Y. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0702609104 · Cited by 592
Self-citationSite‐specific integration of DNA into wild‐type and mutant lox sites placed in the plant genome
Albert, H., Dale, E. C., Lee, E., & Ow, D. W. (1995) · The Plant Journal · doi:10.1046/j.1365-313x.1995.7040649.x · Cited by 464
der Werf, M. J. V., Guettler, M. V., Jain, M. K., & Zeikus, J. G. (1997) · Archives of Microbiology · doi:10.1007/s002030050452 · Cited by 316
Schweizer, H. P. (1992) · Molecular Microbiology · doi:10.1111/j.1365-2958.1992.tb01558.x · Cited by 295
Cited by
Automated design of synthetic ribosome binding sites to control protein expression
Salis, H. M., Mirsky, E. A., & Voigt, C. A. (2009) · Nature Biotechnology · doi:10.1038/nbt.1568 · Cited by 1,844
Constraining the metabolic genotype–phenotype relationship using a phylogeny of in silico methods
Lewis, N. E., Nagarajan, H., & Palsson, B. O. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2737 · Cited by 779
Can, M., Armstrong, F. A., & Ragsdale, S. W. (2014) · Chemical Reviews · doi:10.1021/cr400461p · Cited by 622
The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli
Feist, A. M., & Palsson, B. Ø. (2008) · Nature Biotechnology · doi:10.1038/nbt1401 · Cited by 545
Biorefineries for the production of top building block chemicals and their derivatives
Choi, S., Song, C. W., Shin, J. H., & Lee, S. Y. (2015) · Metabolic Engineering · doi:10.1016/j.ymben.2014.12.007 · Cited by 516
Self-citation
Metadata
- Authors
- Lee, K. H., Park, J. H., Kim, T. Y., Kim, H. U., & Lee, S. Y.
- Venue
- Molecular Systems Biology
- Published
- 2007-01
- Volume
- 3
- Issue
- 1
- Pages
- 149-149
- ISSN
- 1744-4292 (ISSN-L)
- OpenAlex
- W2154767435
- Cited by
- 485
- References
- 22
- FWCI
- 9.94
- Type
- journal article
- Language
- en
- Open access
- gold
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Systems metabolic engineering of Escherichia coli for L ‐threonine production. https://app.cochat.ai/papers/10.1038/msb4100196
- The paper
- Lee, K. H., Park, J. H., Kim, T. Y., Kim, H. U., & Lee, S. Y. (2007). Systems metabolic engineering of Escherichia coli for L ‐threonine production. Molecular Systems Biology. https://doi.org/10.1038/msb4100196
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.