Structural insight into filament formation by mammalian septins
Abstract
Septins are GTP-binding proteins that assemble into homo- and hetero-oligomers and filaments. Although they have key roles in various cellular processes, little is known concerning the structure of septin subunits or the organization and polarity of septin complexes. Here we present the structures of the human SEPT2 G domain and the heterotrimeric human SEPT2-SEPT6-SEPT7 complex. The structures reveal a universal bipolar polymer building block, composed of an extended G domain, which forms oligomers and filaments by conserved interactions between adjacent nucleotide-binding sites and/or the amino- and carboxy-terminal extensions. Unexpectedly, X-ray crystallography and electron microscopy showed that the predicted coiled coils are not involved in or required for complex and/or filament formation. The asymmetrical heterotrimers associate head-to-head to form a hexameric unit that is nonpolarized along the filament axis but is rotationally asymmetrical. The architecture of septin filaments differs fundamentally from that of other cytoskeletal structures.
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The mitotic Septin complex consisting of Septin 2, 6 and 7 has a calculated dipole moment of 2711 Debyes (D).
“The mitotic Septin complex consisting of Septin 2, 6 and 7, possesses a high calculated dipole moment of 2711 Debyes (D)”
From Tumor Treating Fields Perturb the Localization of Septins and Cause Aberrant Mitotic Exit (2015) · cites this paper as [50]
The dipole vectors of the constituent heterotrimeric subunits are predicted to be in roughly the same plane and direction in each bound subunit in the hexamer.
“Interestingly, the orientation of the dipole vectors of the constituent heterotrimeric subunits is predicted to be in roughly the same plane and direction in each bound subunit in the hexamer.”
From Tumor Treating Fields Perturb the Localization of Septins and Cause Aberrant Mitotic Exit (2015) · cites this paper as [50]
The Septin heterotrimer oligomerizes to form larger hexamers.
“Further, these heterotrimers further oligomerize to form larger hexamers [50].”
From Tumor Treating Fields Perturb the Localization of Septins and Cause Aberrant Mitotic Exit (2015) · cites this paper as [50]
The orientation of the dipole vectors of the two constituent heterotrimers is predicted to be roughly parallel to each other in the same orientation within the resulting hexamer.
“Significantly, the orientation of the dipole vectors of the two constituent heterotrimers is predicted to be roughly parallel to each other in the same orientation within the resulting hexamer [50].”
From Tumor Treating Fields Perturb the Localization of Septins and Cause Aberrant Mitotic Exit (2015) · cites this paper as [50]
Septins form short filaments that self-assemble into parallel arrays which are non-polar in nature.
“Septins form short filaments that self-assemble into parallel arrays which are non-polar in nature [50, 57, 58].”
From Tumor Treating Fields Perturb the Localization of Septins and Cause Aberrant Mitotic Exit (2015) · cites this paper as [50]
Cites
<i>Coot</i> : model-building tools for molecular graphics
Emsley, P., & Cowtan, K. (2004) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444904019158 · Cited by 30,571 · see citing works
The PyMOL Molecular Graphics System
DeLano, W. L. (2002) · Medical Entomology and Zoology · Cited by 18,147 · see citing works
The CCP4 suite: programs for protein crystallography
Number Collaborative Computational Project (1994) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444994003112 · Cited by 17,299 · see citing works
Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination
Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse‐Kunstleve, R. W., Jiang, J., Kuszewski, J. J., Nilges, M., Pannu, N., et al. (1998) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444998003254 · Cited by 15,720 · see citing works
Refinement of Macromolecular Structures by the Maximum-Likelihood Method
Murshudov, G. N., Vagin, A. A., & Dodson, E. J. (1997) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444996012255 · Cited by 14,671 · see citing works
Kabsch, W. (1993) · Journal of Applied Crystallography · doi:10.1107/s0021889893005588 · Cited by 3,562 · see citing works
Substructure solution withSHELXD
Schneider, T. R., & Sheldrick, G. M. (2002) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444902011678 · Cited by 1,591 · see citing works
A New Generation of the IMAGIC Image Processing System
van Heel, M., Harauz, G., Orlova, E. V., Schmidt, R., & Schatz, M. X. (1996) · Journal of Structural Biology · doi:10.1006/jsbi.1996.0004 · Cited by 1,229 · see citing works
Classification and evolution of P-loop GTPases and related ATPases
Leipe, D. D., Wolf, Y. I., Koonin, E. V., & Aravind, L. (2002) · Journal of Molecular Biology · doi:10.1006/jmbi.2001.5378 · Cited by 1,148 · see citing works
Use of multivariate statistics in analysing the images of biological macromolecules
van Heel, M., & Frank, J. (1981) · Ultramicroscopy · doi:10.1016/0304-3991(81)90059-0 · Cited by 577 · see citing works
Self- and actin-templated assembly of Mammalian septins
Kinoshita, M., Field, C. M., Coughlin, M. L., Straight, A. F., & Mitchison, T. J. (2002) · Developmental Cell · doi:10.1016/s1534-5807(02)00366-0 · Cited by 526 · see citing works
SOLVE and RESOLVE: Automated Structure Solution and Density Modification
Terwilliger, T. C. (2003) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(03)74002-6 · Cited by 466 · see citing works
A highly ordered ring of membrane-associated filaments in budding yeast.
Byers, B., & Goetsch, L. (1976) · The Journal of Cell Biology · doi:10.1083/jcb.69.3.717 · Cited by 420 · see citing works
Hsu, S.-C., Hazuka, C. D., Roth, R. A., Foletti, D. L., Heuser, J., & Scheller, R. H. (1998) · Neuron · doi:10.1016/s0896-6273(00)80493-6 · Cited by 358 · see citing works
A purified Drosophila septin complex forms filaments and exhibits GTPase activity.
Field, C. M., Al-Awar, O. S., Rosenblatt, J., Wong, M., Alberts, B., & Mitchison, T. J. (1996) · The Journal of Cell Biology · doi:10.1083/jcb.133.3.605 · Cited by 326 · see citing works
DeMarini, D. J., Adams, A. E. M., Fares, H., VIRGILIO, C. D., Valle, G., Chuang, J. S., & Pringle, J. R. (1997) · The Journal of Cell Biology · doi:10.1083/jcb.139.1.75 · Cited by 325 · see citing works
The pathobiology of the septin gene family
Hall, P. A., & Russell, S. H. (2004) · The Journal of Pathology · doi:10.1002/path.1654 · Cited by 323 · see citing works
Kinoshita, M. (2003) · The Journal of Biochemistry · doi:10.1093/jb/mvg182 · Cited by 283 · see citing works
Frazier, J. A., Wong, M. L., Longtine, M. S., Pringle, J. R., Mann, M., Mitchison, T. J., & Field, C. M. (1998) · The Journal of Cell Biology · doi:10.1083/jcb.143.3.737 · Cited by 281 · see citing works
Haarer, B. K., & Pringle, J. R. (1987) · Molecular and Cellular Biology · doi:10.1128/mcb.7.10.3678 · Cited by 279 · see citing works
Mutations in SEPT9 cause hereditary neuralgic amyotrophy
Kuhlenbäumer, G., Hannibal, M., Nelis, E., et al. (2005) · Nature Genetics · doi:10.1038/ng1649 · Cited by 268 · see citing works
The Mammalian Septin MSF Localizes with Microtubules and Is Required for Completion of Cytokinesis
Surka, M. C., Tsang, C. W., & Trimble, W. S. (2002) · Molecular Biology of the Cell · doi:10.1091/mbc.e02-01-0042 · Cited by 266 · see citing works
The portal protein of bacteriophage SPP1: a DNA pump with 13‐fold symmetry.
Dube, P., Tavares, P., Lurz, R., et al. (1993) · The EMBO Journal · doi:10.1002/j.1460-2075.1993.tb05775.x · Cited by 260 · see citing works
Structural insights into yeast septin organization from polarized fluorescence microscopy
Vrabioiu, A. M., & Mitchison, T. J. (2006) · Nature · doi:10.1038/nature05109 · Cited by 230 · see citing works
Some assembly required: yeast septins provide the instruction manual
Versele, M., & Thorner, J. W. (2005) · Trends in Cell Biology · doi:10.1016/j.tcb.2005.06.007 · Cited by 227 · see citing works
Borg proteins control septin organization and are negatively regulated by Cdc42
Joberty, G., Perlungher, R. R., Sheffield, P., Kinoshita, M., Noda, M., Haystead, T., & Macara, I. G. (2001) · Nature Cell Biology · doi:10.1038/ncb1001-861 · Cited by 216 · see citing works
Self-citationNovel roles for mammalian septins: from vesicle trafficking to oncogenesis
Kartmann, B., & Roth, D. (2001) · Journal of Cell Science · doi:10.1242/jcs.114.5.839 · Cited by 206 · see citing works
Expression profiling the human septin gene family
Hall, P. A., Jung, K., Hillan, K. J., & Russell, S. H. (2005) · The Journal of Pathology · doi:10.1002/path.1789 · Cited by 195 · see citing works
Borg/Septin Interactions and the Assembly of Mammalian Septin Heterodimers, Trimers, and Filaments
Sheffield, P., Oliver, C. J., Kremer, B. E., Sheng, S., Shao, Z., & Macara, I. G. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m209701200 · Cited by 183 · see citing works
Self-citationStructural Insights into HypB, a GTP-binding Protein That Regulates Metal Binding
Gasper, R., Scrima, A., & Wittinghofer, A. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m600809200 · Cited by 150 · see citing works
Self-citationNguyen, T. Q., Sawa, H., Okano, H., et al. (2000) · Journal of Cell Science · doi:10.1242/jcs.113.21.3825 · Cited by 137 · see citing works
Mammalian Septins Nomenclature
Macara, I. G., Baldarelli, R. M., Field, C. M., Glotzer, M., Hayashi, Y., Hsu, S.-C., Kennedy, M. B., Kinoshita, M., Longtine, M. S., Low, C., et al. (2002) · Molecular Biology of the Cell · doi:10.1091/mbc.e02-07-0438 · Cited by 129 · see citing works
Self-citationKinoshita, M. (2003) · Genome biology · doi:10.1186/gb-2003-4-11-236 · Cited by 128 · see citing works
GTP Binding Induces Filament Assembly of a Recombinant Septin
Mendoza, M., Hyman, A. A., & Glotzer, M. (2002) · Current Biology · doi:10.1016/s0960-9822(02)01258-7 · Cited by 116 · see citing works
Dimerisation‐dependent GTPase reaction of MnmE: how potassium acts as GTPase‐activating element
Scrima, A., & Wittinghofer, A. (2006) · The EMBO Journal · doi:10.1038/sj.emboj.7601171 · Cited by 111 · see citing works
Self-citationNucleotide binding and filament assembly of recombinant yeast septin complexes
Farkašovský, M., Herter, P., Voß, B., & Wittinghofer, A. (2005) · Biological Chemistry · doi:10.1515/bc.2005.075 · Cited by 101 · see citing works
Self-citationThe Majority of the Saccharomyces cerevisiae Septin Complexes Do Not Exchange Guanine Nucleotides
Vrabioiu, A. M., Gerber, S. A., Gygi, S. P., Field, C. M., & Mitchison, T. J. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m310941200 · Cited by 89 · see citing works
GTP binding and hydrolysis kinetics of human septin 2
Huang, Y., Surka, M. C., Reynaud, D., Pace-Asciak, C. R., & Trimble, W. S. (2006) · FEBS Journal · doi:10.1111/j.1742-4658.2006.05333.x · Cited by 83 · see citing works
Septin Scaffolds and Cleavage Planes in Saccharomyces
Chant, J. (1996) · Cell · doi:10.1016/s0092-8674(00)80972-1 · Cited by 83 · see citing works
Three-dimensional structure of a pre-catalytic human spliceosomal complex B
Boehringer, D., Makarov, E. M., Sander, B. O., Makarova, O. V., Kastner, B., Lührmann, R., & Stark, H. (2004) · Nature Structural & Molecular Biology · doi:10.1038/nsmb761 · Cited by 81 · see citing works
Self-citationA Bni4-Glc7 Phosphatase Complex That Recruits Chitin Synthase to the Site of Bud Emergence
Kozubowski, L., Panek, H. R., Rosenthal, A., et al. (2003) · Molecular Biology of the Cell · doi:10.1091/mbc.e02-06-0373 · Cited by 80 · see citing works
Structural Analysis of Septin 2, 6, and 7 Complexes
Low, C., & Macara, I. G. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m605179200 · Cited by 77 · see citing works
Self-citationCorrim-based alignment for improved speed in single-particle image processing
Sander, B., Golas, M. M., & Stark, H. (2003) · Journal of Structural Biology · doi:10.1016/j.jsb.2003.08.001 · Cited by 51 · see citing works
Self-citationCytoskeleton: What Does GTP Do for Septins?
Mitchison, T. J., & Field, C. M. (2002) · Current Biology · doi:10.1016/s0960-9822(02)01295-2 · Cited by 32 · see citing works
[23] Purification and assay of a septin complex from Drosophila embryos
Oegema, K., Desai, A. B., Wong, M. L., Mitchison, T. J., & Field, C. M. (1998) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(98)98025-9 · Cited by 21 · see citing works
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Estey, M. P., Di Ciano-Oliveira, C., Froese, C. D., Bejide, M. T., & Trimble, W. S. (2010) · Journal of Cell Biology · doi:10.1083/jcb.201006031 · Cited by 231 · see citing works
Tumor Treating Fields Perturb the Localization of Septins and Cause Aberrant Mitotic Exit
Gera, N., Yang, A., Holtzman, T. S., Lee, S. X., Wong, E. T., & Swanson, K. D. (2015) · PLOS ONE · doi:10.1371/journal.pone.0125269 · Cited by 217 · see citing works
Tooley, A. J., Gilden, J., Jacobelli, J., Beemiller, P., Trimble, W. S., Kinoshita, M., & Krummel, M. F. (2009) · Nature Cell Biology · doi:10.1038/ncb1808 · Cited by 189 · see citing works
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Calvo, F., Ranftl, R., Hooper, S., Farrugia, A. J., Moeendarbary, E., Bruckbauer, A., Batista, F., Charras, G., & Sahai, E. (2015) · Cell Reports · doi:10.1016/j.celrep.2015.11.052 · Cited by 142 · see citing works
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Bertin, A., McMurray, M. A., Pierson, J., Thai, L., McDonald, K. L., Zehr, E. A., García, G., Peters, P., Thorner, J., & Nogales, E. (2012) · Molecular Biology of the Cell · doi:10.1091/mbc.e11-10-0850 · Cited by 106 · see citing works
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- Authors
- Sirajuddin, M., Farkasovsky, M., Hauer, F., Kühlmann, D., Macara, I. G., Weyand, M., Stark, H., & Wittinghofer, A.
- Affiliations
- Max Planck Institute of Molecular Physiology (DE)
- Max Planck Society (DE)
- University of Virginia (US)
- Corresponding author
- Wittinghofer, Alfred
- Venue
- Nature
- Published
- 2007-07-18
- Volume
- 449
- Issue
- 7160
- Pages
- 311-315
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W2078116784
- Cited by
- 481
- References
- 45
- Citations by year
- 2026: 19 · 2025: 15 · 2024: 15 · 2023: 20 · 2022: 25 · 2021: 32 · 2020: 18 · 2019: 25 · 2018: 30 · 2017: 29 · 2016: 47 · 2015: 22 · 2014: 30 · 2013: 21 · 2012: 18
- FWCI
- 10.06
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- DORA PSI (Paul Scherrer Institute) (submittedVersion)
- Max Planck Institute for Plasma Physics (submittedVersion)
- Max Planck Digital Library (submittedVersion)
- MPG.PuRe (Max Planck Society) (submittedVersion)
- Funders
- International Max Planck Research School for Environmental, Cellular and Molecular Microbiology
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular Mechanics and Interactions
- Keywords
- septins, SEPT2, SEPT6, SEPT7, septin filaments, G-domain, heterotrimeric complex, filament assembly, coiled coil, nucleotide binding site, rotational asymmetry, cytoskeleton, G proteins, oligomerization
- MeSH terms
- Binding Sites, Cytoskeletal Proteins, Humans, Models, Molecular, Nucleotides, Phosphoric Monoester Hydrolases, Protein Structure, Tertiary, Crystallography, X-Ray, Cell Cycle Proteins, GTP-Binding Proteins, Dimerization, Protein Structure, Quaternary, Multiprotein Complexes, Septins
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