Cited by 427HIV Research and Treatmentinterferon and immune responsesImmune Response and Inflammation

A cryptic sensor for HIV-1 activates antiviral innate immunity in dendritic cells

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Manel, Nicolas, Hogstad, Brandon, Wang, Yaming, Levy, David E., Unutmaz, Derya, Littman, Dan R.·2010·Nature

Abstract

Dendritic cells serve a key function in host defence, linking innate detection of microbes to activation of pathogen-specific adaptive immune responses. Whether there is cell-intrinsic recognition of human immunodeficiency virus (HIV) by host innate pattern-recognition receptors and subsequent coupling to antiviral T-cell responses is not yet known. Dendritic cells are largely resistant to infection with HIV-1, but facilitate infection of co-cultured T-helper cells through a process of trans-enhancement. Here we show that, when dendritic cell resistance to infection is circumvented, HIV-1 induces dendritic cell maturation, an antiviral type I interferon response and activation of T cells. This innate response is dependent on the interaction of newly synthesized HIV-1 capsid with cellular cyclophilin A (CYPA) and the subsequent activation of the transcription factor IRF3. Because the peptidylprolyl isomerase CYPA also interacts with HIV-1 capsid to promote infectivity, our results indicate that capsid conformation has evolved under opposing selective pressures for infectivity versus furtiveness. Thus, a cell-intrinsic sensor for HIV-1 exists in dendritic cells and mediates an antiviral immune response, but it is not typically engaged owing to the absence of dendritic cell infection. The virulence of HIV-1 may be related to evasion of this response, the manipulation of which may be necessary to generate an effective HIV-1 vaccine.

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  • CypA binding of capsid has only been seen with lentiviruses.

    “However, CypA binding of capsid has only been seen with lentiviruses”

    From Are human endogenous retroviruses pathogenic? An approach to testing the hypothesis (2013) · cites this paper as [63]

    The paper reports CypA binding to HIV-1 capsid and, in the passage discussing HIV-2 (section labelled Abstract; page unavailable), notes the reported ability of HIV-2 capsid to bind human CypA. It does not say that capsid binding to CypA has been seen only in lentiviruses; that exclusive qualifier is unsupported. (LLM, conf=0.82)

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  1. [1]Steinman RM Hemmi H Dendritic cells: translating innate to adaptive immunity Current topics in microbiology and immunology 2006 311 17 58 17048704
  2. [2]Takeuchi O Akira S Innate immunity to virus infection Immunological reviews 2009 227 1 75 86 19120477 PMC5489343
  3. [3]Stetson DB Ko JS Heidmann T Medzhitov R Trex1 prevents cell-intrinsic initiation of autoimmunity Cell 2008 134 4 587 598 18724932 PMC2626626
  4. [4]Negre D Characterization of novel safe lentiviral vectors derived from simian immunodeficiency virus (SIVmac251) that efficiently transduce mature human dendritic cells Gene therapy 2000 7 19 1613 1623 11083469
  5. [5]Cameron PU Dendritic cells exposed to human immunodeficiency virus type-1 transmit a vigorous cytopathic infection to CD4+ T cells Science (New York, N.Y 1992 257 5068 383 387 1352913
  6. [7]Mangeot PE High levels of transduction of human dendritic cells with optimized SIV vectors Mol Ther 2002 5 3 283 290 11863418
  7. [8]Goujon C With a little help from a friend: increasing HIV transduction of monocyte-derived dendritic cells with virion-like particles of SIV(MAC) Gene therapy 2006 13 12 991 994 16525481
  8. [9]Honda K Selective contribution of IFN-alpha/beta signaling to the maturation of dendritic cells induced by double-stranded RNA or viral infection Proc Natl Acad Sci U S A 2003 100 19 10872 10877 12960379 PMC196895
  9. [10]Malim MH Hauber J Fenrick R Cullen BR Immunodeficiency virus rev trans-activator modulates the expression of the viral regulatory genes Nature 1988 335 6186 181 183 3412474
  10. [12]Yamashita M Perez O Hope TJ Emerman M Evidence for direct involvement of the capsid protein in HIV infection of nondividing cells PLoS pathogens 2007 3 10 1502 1510 17967060 PMC2042020
  11. [13]Yoo S Molecular recognition in the HIV-1 capsid/cyclophilin A complex Journal of molecular biology 1997 269 5 780 795 9223641
  12. [14]Luban J Bossolt KL Franke EK Kalpana GV Goff SP Human immunodeficiency virus type 1 Gag protein binds to cyclophilins A and B Cell 1993 73 6 1067 1078 8513493
  13. [16]Sato M Distinct and essential roles of transcription factors IRF-3 and IRF-7 in response to viruses for IFN-alpha/beta gene induction Immunity 2000 13 4 539 548 11070172
  14. [17]Moris A Dendritic cells and HIV-specific CD4+ T cells: HIV antigen presentation, T-cell activation, and viral transfer Blood 2006 108 5 1643 1651 16675708
  15. [18]Antons AK Wang R Kalams SA Unutmaz D Suppression of HIV-specific and allogeneic T cell activation by human regulatory T cells is dependent on the strength of signals PLoS One 2008 3 8 e2952 18698349 PMC2490715
  16. [19]Gett AV Sallusto F Lanzavecchia A Geginat J T cell fitness determined by signal strength Nature immunology 2003 4 4 355 360 12640450
  17. [20]Langenkamp A T cell priming by dendritic cells: thresholds for proliferation, differentiation and death and intraclonal functional diversification Eur J Immunol 2002 32 7 2046 2054 12115626
  18. [21]Hopkins S SCY-635, a novel nonimmunosuppressive analog of cyclosporine that exhibits potent inhibition of hepatitis C virus RNA replication in vitro Antimicrob Agents Chemother 54 2 660 672 19933795 PMC2812147
  19. [22]Chatterji U The isomerase active site of cyclophilin A is critical for hepatitis C virus replication J Biol Chem 2009 284 25 16998 17005 19380579 PMC2719337
  20. [23]de Silva TI Cotten M Rowland-Jones SL HIV-2: the forgotten AIDS virus Trends Microbiol 2008 16 12 588 595 18964021
  21. [24]Neagu MR Potent inhibition of HIV-1 by TRIM5-cyclophilin fusion proteins engineered from human components The Journal of clinical investigation 2009 119 10 3035 3047 19741300 PMC2752079
  22. [25]Price AJ Active site remodeling switches HIV specificity of antiretroviral TRIMCyp Nat Struct Mol Biol 2009 16 10 1036 1042 19767750 PMC3556581
  23. [26]Janeway CA Jr Approaching the asymptote? Evolution and revolution in immunology Cold Spring Harb Symp Quant Biol 1989 54 Pt 1 1 13 2700931
  24. [27]Kosmrlj A Effects of thymic selection of the T-cell repertoire on HLA class[thinsp]I-associated control of HIV infection Nature advance online publication PMC3098720 20445539
  25. [28]Morner A Primary human immunodeficiency virus type 2 (HIV-2) isolates, like HIV-1 isolates, frequently use CCR5 but show promiscuity in coreceptor usage Journal of virology 1999 73 3 2343 2349 9971817 PMC104479
  26. [29]Fonteneau JF Generation of high quantities of viral and tumor-specific human CD4+ and CD8+ T-cell clones using peptide pulsed mature dendritic cells J Immunol Methods 2001 258 1–2 111 126 11684128
  27. [30]Elkon R Linhart C Sharan R Shamir R Shiloh Y Genome-wide in silico identification of transcriptional regulators controlling the cell cycle in human cells Genome research 2003 13 5 773 780 12727897 PMC430898
  28. [31]Shamir R EXPANDER--an integrative program suite for microarray data analysis BMC bioinformatics 2005 6 232 16176576 PMC1261157
  29. [32]Elkon R SPIKE--a database, visualization and analysis tool of cellular signaling pathways BMC bioinformatics 2008 9 110 18289391 PMC2263022
  30. [33]Manel N Unutmaz D Littman DR The differentiation of human T(H)-17 cells requires transforming growth factor-beta and induction of the nuclear receptor RORgammat Nature immunology 2008 9 6 641 649 18454151 PMC2597394
  31. [35]Moffat J A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen Cell 2006 124 6 1283 1298 16564017
  32. [36]Oswald-Richter K HIV infection of naturally occurring and genetically reprogrammed human regulatory T-cells PLoS Biol 2004 2 7 E198 15252446 PMC449855
  33. [37]Griffin SD Allen JF Lever AM The major human immunodeficiency virus type 2 (HIV-2) packaging signal is present on all HIV-2 RNA species: cotranslational RNA encapsidation and limitation of Gag protein confer specificity Journal of virology 2001 75 24 12058 12069 11711596 PMC116101
  34. [38]Mangeot PE Development of minimal lentivirus vectors derived from simian immunodeficiency virus (SIVmac251) and their use for gene transfer into human dendritic cells Journal of virology 2000 74 18 8307 8315 10954529 PMC116340
  35. [39]Zhang H Novel single-cell-level phenotypic assay for residual drug susceptibility and reduced replication capacity of drug-resistant human immunodeficiency virus type 1 Journal of virology 2004 78 4 1718 1729 14747537 PMC369469

Cited by

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Authors
Manel, N., Hogstad, B., Wang, Y., Levy, D. E., Unutmaz, D., & Littman, D. R.
Affiliations
  • New York University (US)
  • Howard Hughes Medical Institute (US)
Corresponding author
Littman, Dan R.
Venue
Nature
Published
2010-09-09
Volume
467
Issue
7312
Pages
214-217
ISSN
  • 0028-0836 (ISSN-L)
  • 1476-4687
OpenAlex
W2019039109
Cited by
427
References
4
Citations by year
2026: 3 · 2025: 9 · 2024: 11 · 2023: 18 · 2022: 11 · 2021: 22 · 2020: 16 · 2019: 16 · 2018: 28 · 2017: 32 · 2016: 30 · 2015: 37 · 2014: 49 · 2013: 42 · 2012: 55
FWCI
16.34
Type
journal article
Language
en
Update notices
erratum (2011-02-16)
Open access
Locations
  • Nature (publishedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (acceptedVersion)
  • HAL (submittedVersion)
  • RePEc: Research Papers in Economics (submittedVersion)
Funders
  • Howard Hughes Medical Institute
  • Cancer Research Institute
  • Johns Hopkins University
  • York University
  • National Institutes of Health
  • National Institute of Allergy and Infectious Diseases (AI 28900, AI 33856, R01AI033856, U54AI057168, R21AI084633, R01AI065303, U54AI057158, R01AI028900)
Topics
  • Life Sciences › Immunology and Microbiology › Virology › HIV Research and Treatment
  • Life Sciences › Immunology and Microbiology › Immunology › interferon and immune responses
  • Life Sciences › Immunology and Microbiology › Immunology › Immune Response and Inflammation
Keywords
HIV-1, dendritic cells, innate immunity, type I interferon, Vpx, SIVmac, capsid, cyclophilin A, IRF3, dendritic cell maturation, T cell activation, HIV pathogenesis, vaccine design, HIV infectivity, peptidylprolyl isomerase, antiviral immune evasion
MeSH terms
Cell Line, Dendritic Cells, Humans, Immunity, Innate, Lymphocyte Activation, Monocytes, T-Lymphocytes, HIV-1, HIV Infections, Cyclophilin A, Capsid Proteins, Interferon Regulatory Factor-3

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