The DOI matches its Crossref record; 97 of the 98 references it cites were found in a registry or an index.
Complex archaea that bridge the gap between prokaryotes and eukaryotes
Open accessAbstract
The origin of the eukaryotic cell remains one of the most contentious puzzles in modern biology. Recent studies have provided support for the emergence of the eukaryotic host cell from within the archaeal domain of life, but the identity and nature of the putative archaeal ancestor remain a subject of debate. Here we describe the discovery of 'Lokiarchaeota', a novel candidate archaeal phylum, which forms a monophyletic group with eukaryotes in phylogenomic analyses, and whose genomes encode an expanded repertoire of eukaryotic signature proteins that are suggestive of sophisticated membrane remodelling capabilities. Our results provide strong support for hypotheses in which the eukaryotic host evolved from a bona fide archaeon, and demonstrate that many components that underpin eukaryote-specific features were already present in that ancestor. This provided the host with a rich genomic 'starter-kit' to support the increase in the cellular and genomic complexity that is characteristic of eukaryotes.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“a scenario that has gained recent support from the discovery of the Asgard archaea, which form a monophyletic group with Eukaryotes in phylogenetic analyses and encode various eukaryotic signature proteins (Spang et al. 2015;Zaremba-Niedzwiedzka et al. 2017;Eme et al. 2018).”
From The Emergence of Life (2019) · cites this paper as Spang et al. 2015
Experimental — accuracy not yet measuredThe source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“Furthermore, ATP synthase evolution supports scenarios on eukaryotic origins from an asgardarchaeal host3,4,13,14 and alphaproteobacterial symbiont107,108”
From ATP synthase evolution on a cross-braced dated tree of life (2023) · cites this paper as [3]
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, S. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.17.3389 · Cited by 73,302
Trimmomatic: a flexible trimmer for Illumina sequence data
Bolger, A. M., Lohse, M., & Usadel, B. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu170 · Cited by 65,548
Fast and accurate short read alignment with Burrows-Wheeler transform
Li, H., & Durbin, R. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp324 · Cited by 58,607
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Katoh, K., & Standley, D. M. (2013) · Molecular Biology and Evolution · doi:10.1093/molbev/mst010 · Cited by 46,209
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., Peplies, J., & Glöckner, F. O. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks1219 · Cited by 33,055
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Stamatakis, A. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu033 · Cited by 32,291
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Bankevich, A., Nurk, S., Antipov, D., Gurevich, A. A., Dvorkin, M. V., Kulikov, A. S., Lesin, V. M., Nikolenko, S., Pham, S., Prjibelski, A. D., et al. (2012) · Journal of Computational Biology · doi:10.1089/cmb.2012.0021 · Cited by 26,312
Modern Applied Statistics with S
Venables, W. N., & Ripley, B. D. (2002) · Statisctics and computing/Statistics and computing · doi:10.1007/978-0-387-21706-2 · Cited by 25,941
Schloss, P. D., Westcott, S. L., Ryabin, T., Hall, J. R., Hartmann, M., Hollister, E. B., Lesniewski, R. A., Oakley, B. B., Parks, D. H., Robinson, C. J., et al. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.01541-09 · Cited by 21,481
Search and clustering orders of magnitude faster than BLAST
Edgar, R. C. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btq461 · Cited by 21,098
Flagged first, then by citations
1 of the 98 references couldn’t be matched to a known paper.
Research works printed but not linked: 6
- Jorgensen, S. L. et al. Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge. Proc. Natl Acad. Sci.. USA 109, E2846–E2855 (2012) · DOI
- Jorgensen, S. L., Thorseth, I. H., Pedersen, R. B., Baumberger, T. & Schleper, C. Quantitative and phylogenetic study of the deep sea archaeal group in sediments of the Arctic Mid-Ocean spreading ridge. Front. Microbiol. 4, 299 (2013) · DOI
- Guy, L., Saw, J. H. & Ettema, T. J. The Archaeal Legacy of Eukaryotes: A Phylogenomic Perspective. Cold Spring Harb. Perspect. Biol.. 6, a016022 (2014) · DOI · Paper page
- Kawai, M. et al. High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes. Front. Microbiol. 5, 80 (2014) · DOI
- Ettema, T. J., Lindas, A. C. & Bernander, R. An actin-based cytoskeleton in archaea. Mol. Microbiol.. 80, 1052–1061 (2011) · DOI
- Yutin, N., Wolf, M. Y., Wolf, Y. I. & Koonin, E. V. The origins of phagocytosis and eukaryogenesis. Biol. Direct 4, 9 (2009) · DOI · Paper page
Cited by
Sorted by citations
Items 501–600 of 1,001
The Last Universal Common Ancestor of Ribosome-Encoding Organisms: Portrait of LUCA
Forterre, P. (2024) · Journal of Molecular Evolution · doi:10.1007/s00239-024-10186-9 · Cited by 27
Hou, D., Yan, H., Lin, H., Zhang, H., Zhang, D., & Wang, K. (2024) · Ecological Processes · doi:10.1186/s13717-024-00550-4 · Cited by 24
Adaptivity of Archaeal and Bacterial Extremophiles
Saralov, A. I. (2019) · Microbiology · doi:10.1134/s0026261719040106 · Cited by 27
Unprecedented Diversity of Unique CRISPR-Cas-Related Systems and Cas1 Homologs in Asgard Archaea
Makarova, K. S., Wolf, Y. I., Shmakov, S., Liu, Y., Li, M., & Koonin, E. V. (2020) · The CRISPR Journal · doi:10.1089/crispr.2020.0012 · Cited by 22
Prosdocimi, F., José, M. V., & de Farías, S. T. (2020) · Acta Biotheoretica · doi:10.1007/s10441-020-09388-7 · Cited by 24
Bremer, N., Tria, F. D. K., Skejo, J., Garg, S. G., & Martin, W. F. (2022) · Genome Biology and Evolution · doi:10.1093/gbe/evac079 · Cited by 24
Functional characterization of prokaryotic dark matter: the road so far and what lies ahead
Escudeiro, P., Henry, C. S., & Dias, R. P. M. (2022) · Current Research in Microbial Sciences · doi:10.1016/j.crmicr.2022.100159 · Cited by 24
Archaeal histones: dynamic and versatile genome architects
Dame, R. T., & Henneman, B. (2015) · AIMS Microbiology · doi:10.3934/microbiol.2015.1.72 · Cited by 24
From climate models to planetary habitability: temperature constraints for complex life
Silva, L., Vladilo, G., Schulte, P. M., Murante, G., & Provenzale, A. (2016) · International Journal of Astrobiology · doi:10.1017/s1473550416000215 · Cited by 27
Pallen, M. J. (2016) · Microbial Biotechnology · doi:10.1111/1751-7915.12389 · Cited by 25
Ramírez, G. A., Graham, D., & D'Hondt, S. L. (2018) · Limnology and Oceanography Methods · doi:10.1002/lom3.10264 · Cited by 24
Haeckel's 1866 tree of life and the origin of eukaryotes
Kutschera, U. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.114 · Cited by 24
Tamarit, D., Köstlbacher, S., Appler, K. E., Panagiotou, K., Anda, V. D., Rinke, C., Baker, B. J., & Ettema, T. J. G. (2024) · Systematic and Applied Microbiology · doi:10.1016/j.syapm.2024.126525 · Cited by 21
Self-citationDated gene duplications elucidate the evolutionary assembly of eukaryotes
Kay, C., Spang, A., Szöllősi, G. J., Pisani, D., Williams, T. A., & Donoghue, P. C. J. (2025) · Nature · doi:10.1038/s41586-025-09808-z · Cited by 32
Self-citationHigh-resolution metagenome assembly for modern long reads with myloasm
Shaw, J., Marin, M. G., & Li, H. (2026) · Nature Biotechnology · doi:10.1038/s41587-026-03053-z · Cited by 34
Archaeal Communities: The Microbial Phylogenomic Frontier
Medina-Chávez, N. O., & Travisano, M. (2022) · Frontiers in Genetics · doi:10.3389/fgene.2021.693193 · Cited by 24
The expanding Asgard archaea and their elusive relationships with Eukarya
Cunha, V. D., Gaïa, M., & Forterre, P. (2022) · mLife · doi:10.1002/mlf2.12012 · Cited by 21
Microbial biosignatures in ancient deep‐sea hydrothermal sulfides
Runge, E., Mansor, M., Kappler, A. A., & Duda, J. (2022) · Geobiology · doi:10.1111/gbi.12539 · Cited by 30
Origin of life: Drawing the big picture
Prosdocimi, F., & de Farías, S. T. (2023) · Progress in Biophysics and Molecular Biology · doi:10.1016/j.pbiomolbio.2023.04.005 · Cited by 28
Conserved structures of ESCRT-III superfamily members across domains of life
Schlösser, L., Sachse, C., Low, H. H., & Schneider, D. (2023) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2023.08.009 · Cited by 22
The Hidden Hydrogeosphere: The Contribution of Deep Groundwater to the Planetary Water Cycle
Lollar, B. S., Warr, O., & Higgins, P. M. (2024) · Annual Review of Earth and Planetary Sciences · doi:10.1146/annurev-earth-040722-102252 · Cited by 23
The Structure, Function and Roles of the Archaeal ESCRT Apparatus
Samson, R. Y., Dobro, M. J., Jensen, G. J., & Bell, S. D. (2017) · Sub-cellular biochemistry/Subcellular biochemistry · doi:10.1007/978-3-319-53047-5_12 · Cited by 26
Giulio, M. D. (2018) · Journal of Theoretical Biology · doi:10.1016/j.jtbi.2018.01.025 · Cited by 21
Prosdocimi, F., Zamudio, G. S., Palacios-Pérez, M., de Farías, S. T., & José, M. V. (2020) · Life · doi:10.3390/life10080134 · Cited by 25
Recovery of high-qualitied Genomes from a deep-inland Salt Lake Using BASALTPreprint
Yu, K., Qiu, Z. G., Mu, R., Qiao, X., Zhang, L., Lian, C., Deng, C., Wu, Y., Xu, Z., Li, B. J., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.03.05.434042 · Cited by 22
DNA-binding mechanism and evolution of replication protein A
(2023) · doi:10.1038/s41467-023-38048-w · Cited by 22
ESCRTs – a multi-purpose membrane remodeling device encoded in all life forms
Nachmias, D., Frohn, B. P., Sachse, C., Mizrahi, I., & Elia, N. (2025) · Trends in Microbiology · doi:10.1016/j.tim.2025.01.009 · Cited by 23
Deciphering the archaeal communities in tree rhizosphere of the Qinghai-Tibetan plateau
Zhang, M., Chai, L., Huang, M., Jia, W., Guo, J., & Huang, Y. (2020) · BMC Microbiology · doi:10.1186/s12866-020-01913-5 · Cited by 22
Microbe-Mediated Mn Oxidation—A Proposed Model of Mineral Formation
Sjöberg, S., Yu, C., Stairs, C. W., Allard, B., Hallberg, R. O., Henriksson, S., Åström, M., & Dupraz, C. (2021) · Minerals · doi:10.3390/min11101146 · Cited by 23
Imachi, H., Nobu, M. K., Miyazaki, M., Tasumi, E., Saito, Y., Sakai, S., Ogawara, M., Ohashi, A., & Takai, K. (2022) · Nature Protocols · doi:10.1038/s41596-022-00735-1 · Cited by 23
Quest for Ancestors of Eukaryal Cells Based on Phylogenetic Analyses of Aminoacyl-tRNA Synthetases
Furukawa, R., Nakagawa, M., Kuroyanagi, T., Yokobori, S., & Yamagishi, A. (2016) · Journal of Molecular Evolution · doi:10.1007/s00239-016-9768-2 · Cited by 22
Dunn, C. D. (2017) · Journal of Molecular Evolution · doi:10.1007/s00239-017-9809-5 · Cited by 24
Jüttner, M., Weiß, M., Ostheimer, N., Reglin, C., Kern, M. A. G., Knüppel, R., & Ferreira-Cerca, S. (2019) · Nucleic Acids Research · doi:10.1093/nar/gkz1156 · Cited by 22
Whole-proteome tree of life suggests a deep burst of organism diversity
Choi, J., & Kim, S. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1915766117 · Cited by 22
Is it possible that cells have had more than one origin?
de Farías, S. T., José, M. V., & Prosdocimi, F. (2021) · Biosystems · doi:10.1016/j.biosystems.2021.104371 · Cited by 23
Tran, L. T., Akıl, C., Senju, Y., & Robinson, R. C. (2024) · Communications Biology · doi:10.1038/s42003-024-05888-1 · Cited by 21
The Asgard archaeal origins of Arf family GTPases involved in eukaryotic organelle dynamics
Vargová, R., Chevreau, R., Alves, M., Courbin, C., Terry, K., Legrand, P., Eliáš, M., Ménétrey, J., Dacks, J. B., & Jackson, C. L. (2025) · Nature Microbiology · doi:10.1038/s41564-024-01904-6 · Cited by 26
Baum, B., & Baum, D. (2020) · BMC Biology · doi:10.1186/s12915-020-00806-3 · Cited by 21
The catalytic and structural basis of archaeal glycerophospholipid biosynthesis
de Kok, N. A. W., & Driessen, A. J. M. (2022) · Extremophiles · doi:10.1007/s00792-022-01277-w · Cited by 21
Asgard ESCRT-III and VPS4 reveal conserved chromatin binding properties of the ESCRT machinery
Nachmias, D., Melnikov, N., Zorea, A., Sharon, M., Yemini, R., De-picchoto, Y., Tsirkas, I., Aharoni, A., Frohn, B. P., Schwille, P., et al. (2022) · The ISME Journal · doi:10.1038/s41396-022-01328-2 · Cited by 19
Archaeal actin from a hyperthermophile forms a single-stranded filament
Braun, T., Orlova, A., Valegard, K., Lindås, A., Schroeder, G. F., & Egelman, E. H. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1509069112 · Cited by 23
Bacterial Origin and Reductive Evolution of the CPR Group
Bokhari, R. H., Amirjan, N., Jeong, H., Kim, K. M., Caetano‐Anollés, G., & Nasir, A. (2020) · Genome Biology and Evolution · doi:10.1093/gbe/evaa024 · Cited by 21
Long‐term evolution of viruses: A Janus‐faced balance
Nasir, A., Kim, K. M., & Caetano‐Anollés, G. (2017) · BioEssays · doi:10.1002/bies.201700026 · Cited by 21
Life and Death of Ribosomes in Archaea
Ferreira-Cerca, S. (2017) · Nucleic acids and molecular biology · doi:10.1007/978-3-319-65795-0_6 · Cited by 22
The Asgard archaeal ESCRT-III system forms helical filaments and remodels eukaryotic-like membranes
Melnikov, N., Junglas, B., Halbi, G., Nachmias, D., Zerbib, E., Gueta, N., Upcher, A., Zalk, R., Sachse, C., Bernheim‐Groswasser, A., et al. (2025) · The EMBO Journal · doi:10.1038/s44318-024-00346-4 · Cited by 23
Chistoserdova, L. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.01425 · Cited by 21
Marter, P., Huang, S., Brinkmann, H., Pradella, S., Jarek, M., Rohde, M., Bunk, B., & Petersen, J. (2021) · Genes · doi:10.3390/genes12030389 · Cited by 20
A Comparative Perspective on Ribosome Biogenesis: Unity and Diversity Across the Tree of Life
Jüttner, M., & Ferreira-Cerca, S. (2022) · Methods in molecular biology · doi:10.1007/978-1-0716-2501-9_1 · Cited by 19
Why and how to use the SeqCode
Whitman, W. B., Chuvochina, M. S., Hedlund, B. P., Konstantinidis, K. T., Palmer, M., Rodriguez‐R, L. M., Sutcliffe, I. C., & Wang, F. (2024) · mLife · doi:10.1002/mlf2.12092 · Cited by 21
Archaeal actins and the origin of a multi-functional cytoskeleton
Charles‐Orszag, A., Petek-Seoane, N. A., & Mullins, R. D. (2024) · Journal of Bacteriology · doi:10.1128/jb.00348-23 · Cited by 19
Lauer, A., Sørensen, K. B., & Teske, A. (2016) · Microorganisms · doi:10.3390/microorganisms4030032 · Cited by 20
Salcher, M. M., Andrei, A., Bulzu, P., Keresztes, Z. G., Banciu, H. L., & Ghai, R. (2020) · mSphere · doi:10.1128/msphere.00686-20 · Cited by 20
Mitonuclear Interactions in the Maintenance of Mitochondrial Integrity
Karakaidos, P., & Rampias, T. (2020) · Life · doi:10.3390/life10090173 · Cited by 17
Archaea: A Gold Mine for Topoisomerase Diversity
Garnier, F., Couturier, M., Debat, H., & Nadal, M. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.661411 · Cited by 21
The darkest microbiome—a post‐human biosphere
Timmis, K. N., & Hallsworth, J. E. (2021) · Microbial Biotechnology · doi:10.1111/1751-7915.13976 · Cited by 20
Jüttner, M., & Ferreira-Cerca, S. (2022) · Molecular Biology and Evolution · doi:10.1093/molbev/msac054 · Cited by 21
Zhang, R., Zou, B., Yan, Y., Jeon, C. O., Li, M., Cai, M., & Quan, Z. (2020) · BMC Microbiology · doi:10.1186/s12866-020-1707-0 · Cited by 20
Evolving Perspective on the Origin and Diversification of Cellular Life and the Virosphere
Spang, A., Mahendrarajah, T., Offre, P., & Stairs, C. W. (2022) · Genome Biology and Evolution · doi:10.1093/gbe/evac034 · Cited by 19
Self-citationEukaryogenesis: The Rise of an Emergent Superorganism
Bell, P. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2022.858064 · Cited by 18
The archaeal Cdv cell division system
Blanch-Jover, A., & Dekker, C. (2023) · Trends in Microbiology · doi:10.1016/j.tim.2022.12.006 · Cited by 17
Mangroves: A hotspot for novel bacterial and archaeal diversity
Baskaran, V., Mahalakshmi, A., & Prabavathy, V. R. (2023) · Rhizosphere · doi:10.1016/j.rhisph.2023.100748 · Cited by 19
Archaea‐First and the Co‐Evolutionary Diversification of Domains of Life
Staley, J. T., & Caetano‐Anollés, G. (2018) · BioEssays · doi:10.1002/bies.201800036 · Cited by 19
Inferring the Evolutionary History of Your Favorite Protein: A Guide for Molecular Biologists
van Hooff, J. J. E., Tromer, E. C., van Dam, T. J. P., Kops, G. J. P. L., & Snel, . (2019) · BioEssays · doi:10.1002/bies.201900006 · Cited by 15
Descent of Bacteria and Eukarya From an Archaeal Root of Life
Long, X., Xue, H., & Wong, J. T.-F. (2020) · Evolutionary Bioinformatics · doi:10.1177/1176934320908267 · Cited by 19
Nikolayev, S., Cohen-Rosenzweig, C., & Eichler, J. (2020) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2020.106951 · Cited by 19
Evolutionary relationships between Archaea and eukaryotes
Gribaldo, S., & Brochier‐Armanet, C. (2019) · Nature Ecology & Evolution · doi:10.1038/s41559-019-1073-1 · Cited by 19
Simpson, A. G. B., & Eglit, Y. (2016) · Elsevier eBooks · doi:10.1016/b978-0-12-800049-6.00247-x · Cited by 19
An Asgard archaeon from a modern analog of ancient microbial mats
Nobs, S.-J., Johnson, M. D., Williams, T. J., Meltzer, J., Vázquez-Campos, X., MacLeod, F. I., Rowell, K., Pitt, M. E., Paul, B., Shepherd, D. C., et al. (2026) · Current Biology · doi:10.1016/j.cub.2026.03.041 · Cited by 18
An Introduction to Phagocytosis
Hallett, M. B. (2020) · Advances in experimental medicine and biology · doi:10.1007/978-3-030-40406-2_1 · Cited by 19
Yen, C.-Y., Lin, M.-G., Chen, B., Ng, I. W., Read, N., Kabli, A. F., Wu, C., Shen, Y.-Y., Chen, C.-H., Barillà, D., et al. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab1155 · Cited by 17
Origin and Early Evolution of the Eukaryotes: Perspectives from the Fossil Record
Agić, H. (2021) · Advances in astrobiology and biogeophysics · doi:10.1007/978-3-030-81039-9_11 · Cited by 18
Could the tumor-associated microbiota be the new multi-faceted player in the tumor microenvironment?
Goubet, A. (2023) · Frontiers in Oncology · doi:10.3389/fonc.2023.1185163 · Cited by 18
van Hooff, J. J. E., Raas, M. W. D., Tromer, E. C., & Eme, L. (2025) · Cell Reports · doi:10.1016/j.celrep.2025.115855 · Cited by 18
Marine genomics: News and views
Ribeiro, Â. M., Foote, A. D., Kupczok, A., Frazão, B., Limborg, M. T., Piñeiro, R., Abalde, S., Rocha, S., & da Fonseca, R. R. (2016) · Marine Genomics · doi:10.1016/j.margen.2016.09.002 · Cited by 18
Asgard archaea in the haima cold seep: Spatial distribution and genomic insights
Lu, R., Gao, Z., Li, W., Wei, Z., Wei, T., Huang, J., Li, M., Tao, J., Wang, H., & Wang, Y. (2021) · Deep Sea Research Part I Oceanographic Research Papers · doi:10.1016/j.dsr.2021.103489 · Cited by 17
Diversity-Function Relationships in Natural, Applied, and Engineered Microbial Ecosystems
Free, A., McDonald, M. A., & Pagaling, E. (2018) · Advances in applied microbiology · doi:10.1016/bs.aambs.2018.07.002 · Cited by 19
Microbial diversity: The tree of life comes of age
Spang, A., & Ettema, T. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.56 · Cited by 21
Self-citationWatkins, S. C., Sible, E., & Putonti, C. (2018) · Viruses · doi:10.3390/v10060331 · Cited by 17
The Effect of Nonreversibility on Inferring Rooted Phylogenies
Cherlin, S., Heaps, S., Nye, T., Boys, R., Williams, T., & Embley, T. (2015) · Molecular biology and evolution · doi:10.1093/molbev/msx294 · Cited by 12
Firrincieli, A., Negroni, A., Zanaroli, G., & Cappelletti, M. (2021) · Microorganisms · doi:10.3390/microorganisms9040859 · Cited by 17
Verma, A., Åberg-Zingmark, E., Sparrman, T., Mushtaq, A. U., Rogne, P., Grundström, C., Berntsson, R. P. ‐., Sauer, U. H., Backman, L., Nam, K., et al. (2022) · Science Advances · doi:10.1126/sciadv.abm4089 · Cited by 17
Archaea/eukaryote-specific ribosomal proteins - guardians of a complex structure
Kisly, I., & Tamm, T. (2023) · Computational and Structural Biotechnology Journal · doi:10.1016/j.csbj.2023.01.037 · Cited by 19
García‐Maldonado, J. Q., Latisnere‐Barragán, H., Escobar‐Zepeda, A., Cadena, S., Ramírez‐Arenas, P. J., Vázquez‐Juárez, R., Rojas-Contreras, M., & López‐Cortés, A. (2023) · Microorganisms · doi:10.3390/microorganisms11030812 · Cited by 16
Nucleosomes at the Dawn of Eukaryotes
Hocher, A., & Warnecke, T. (2024) · Genome Biology and Evolution · doi:10.1093/gbe/evae029 · Cited by 17
Invited review: MnmE, a GTPase that drives a complex tRNA modification reaction
Fislage, M., Wauters, L., & Versées, W. (2016) · Biopolymers · doi:10.1002/bip.22813 · Cited by 17
Miranda‐Astudillo, H., Colina-Tenorio, L., Jiménez-Suárez, A., Vázquez‐Acevedo, M., Salin, B., Giraud, M., Remacle, C., Cardol, P., & González‐Halphen, D. (2018) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/j.bbabio.2018.03.004 · Cited by 17
Origin and evolution of fungal HECT ubiquitin ligases
Marı́n, I. (2018) · Scientific Reports · doi:10.1038/s41598-018-24914-x · Cited by 17
Naturally Occurring Isoleucyl-tRNA Synthetase without tRNA-dependent Pre-transfer Editing
Cvetešić, N., Dulić, M., Biluš, M., Šoštarić, N., Lenhard, B., & Gruic‐Sovulj, I. (2016) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.698225 · Cited by 18
Lyu, Z., & Whitman, W. B. (2016) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-016-2286-y · Cited by 17
The indefinable term ‘prokaryote’ and the polyphyletic origin of genes
Giulio, M. D. (2017) · Journal of Genetics · doi:10.1007/s12041-017-0775-x · Cited by 17
ProteoVision: web server for advanced visualization of ribosomal proteins
Penev, P. I., McCann, H., Meade, C. D., Álvarez-Carreño, C., Maddala, A., Bernier, C. R., Chivukula, V. L., Ahmad, M., Gulen, B., Sharma, A., et al. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab351 · Cited by 17
Asgard archaea are diverse, ubiquitous, and transcriptionally active microbesPreprint
Cai, M., Liu, Y., Zhou, Z., Yang, Y., Pan, J., Gu, J., & Li, M. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/374165 · Cited by 16
Cunha, V. D., Gaïa, M., Ogata, H., Jaillon, O., Delmont, T. O., & Forterre, P. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.06.16.150565 · Cited by 15
Uncharted biosynthetic potential of the ocean microbiomePreprint
Paoli, L., Ruscheweyh, H., Forneris, C. C., Kautsar, S. A., Clayssen, Q., Salazar, G., Milanese, A., Gehrig, D., Larralde, M. F., Carroll, L. M., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.03.24.436479 · Cited by 17
Unveiling the life of archaea in sediments: Diversity, metabolic potentials, and ecological roles
Zou, D., Qi, Y.-L., Zhou, J., Liu, Y., & Li, M. (2025) · iMetaOmics. · doi:10.1002/imo2.56 · Cited by 16
Guaymas Basin, a Hydrothermal Hydrocarbon Seep Ecosystem
Teske, A. (2020) · Springer oceanography · doi:10.1007/978-3-030-34827-4_3 · Cited by 16
Akıl, C., Tran, L. T., Orhant‐Prioux, M., Baskaran, Y., Senju, Y., Takeda, S., Chotchuang, P., Muengsaen, D., Schulte, A., Manser, E. J., et al. (2022) · Communications Biology · doi:10.1038/s42003-022-03783-1 · Cited by 15
Metadata
- Authors
- Spang, A., Saw, J. H., Jørgensen, S. L., Zaremba-Niedzwiedzka, K., Martijn, J., Lind, A. E., van Eijk, R., Schleper, C., Guy, L., & Ettema, T. J. G.
- Affiliations
- Uppsala University (SE)
- University of Bergen (NO)
- University of Vienna (AT)
- Corresponding author
- Guy, Lionel
- Ettema, Thijs J. G.
- ORCID
- Venue
- Nature
- Published
- 2015-05
- Volume
- 521
- Issue
- 7551
- Pages
- 173-179
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC4444528
- OpenAlex
- W1939911045
- Cited by
- 1,324
- References
- 98
- Citations by year
- 2026: 85 · 2025: 88 · 2024: 118 · 2023: 127 · 2022: 116 · 2021: 125 · 2020: 136 · 2019: 117 · 2018: 118 · 2017: 118 · 2016: 118 · 2015: 54
- FWCI
- 58.70
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Socio-Environmental Systems Modeling (acceptedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Protist diversity and phylogeny
- Physical Sciences › Physics and Astronomy › Astronomy and Astrophysics › Origins and Evolution of Life
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Keywords
- Lokiarchaeota, eukaryotic origin, archaea, membrane remodeling, phylogenomics, cellular complexity
- MeSH terms
- Actins, Archaea, Arctic Regions, Eukaryotic Cells, Actin Cytoskeleton, Molecular Sequence Data, Phylogeny, Prokaryotic Cells, Evolution, Molecular, Proteome, Monomeric GTP-Binding Proteins, Metagenome, Endosomal Sorting Complexes Required for Transport, Eukaryota, Hydrothermal Vents
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review