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The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4
Open accessAbstract
We report the complete genome sequence of Zymomonas mobilis ZM4 (ATCC31821), an ethanologenic microorganism of interest for the production of fuel ethanol. The genome consists of 2,056,416 base pairs forming a circular chromosome with 1,998 open reading frames (ORFs) and three ribosomal RNA transcription units. The genome lacks recognizable genes for 6-phosphofructokinase, an essential enzyme in the Embden-Meyerhof-Parnas pathway, and for two enzymes in the tricarboxylic acid cycle, the 2-oxoglutarate dehydrogenase complex and malate dehydrogenase, so glucose can be metabolized only by the Entner-Doudoroff pathway. Whole genome microarrays were used for genomic comparisons with the Z. mobilis type strain ZM1 (ATCC10988) revealing that 54 ORFs predicted to encode for transport and secretory proteins, transcriptional regulators and oxidoreductase in the ZM4 strain were absent from ZM1. Most of these ORFs were also found to be actively transcribed in association with ethanol production by ZM4.
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Swings, J., & De Ley, J. (1977) · Bacteriological Reviews · doi:10.1128/br.41.1.1-46.1977 · Cited by 655
Cited by
Zymomonas mobilis: a novel platform for future biorefineries
He, M., Wu, B., Qin, H., Ruan, Z., Tan, F., Wang, J., Shui, Z., Dai, L., Zhu, Q., Pan, K., et al. (2014) · Biotechnology for Biofuels · doi:10.1186/1754-6834-7-101 · Cited by 203
Advances and prospects in metabolic engineering of Zymomonas mobilis
Wang, X., He, Q., Yang, Y., Wang, J., Haning, K., Hu, Y., Wu, B., He, M., Zhang, Y., Bao, J., et al. (2018) · Metabolic Engineering · doi:10.1016/j.ymben.2018.04.001 · Cited by 154
Yang, Y., Hu, M., Tang, Y., Geng, B., Qiu, M., He, Q., Chen, S., Wang, X., & Yang, S. (2018) · Bioresources and Bioprocessing · doi:10.1186/s40643-018-0193-9 · Cited by 60
Regulatory mechanisms related to biofuel tolerance in producing microbes
Fu, Y., Chen, L., & Zhang, W. (2016) · Journal of Applied Microbiology · doi:10.1111/jam.13162 · Cited by 13
Metadata
- Authors
- Seo, J.-S., Chong, H., Park, H. S., Yoon, K.-O., Jung, C., Kim, J. J., Hong, J. H., Kim, H., Kim, J.-H., Kil, J.-I., Park, C. J., Oh, H.-M., Lee, J.-S., Jin, S.-J., Um, H.-W., Lee, H.-J., Oh, S.-J., Kim, J. Y., Kang, H. L., Lee, S. Y., Lee, K. J., & Kang, H. S.
- Venue
- Nature Biotechnology
- Published
- 2005-01
- Volume
- 23
- Issue
- 1
- Pages
- 63-68
- ISSN
- 0733-222X (ISSN-L)
- 1087-0156
- 1546-1696
- OpenAlex
- W2009580263
- Cited by
- 282
- References
- 1
- FWCI
- 3.17
- Type
- journal article
- Language
- en
- Open access
- hybrid
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- Seo, J.-S., Chong, H., Park, H. S., Yoon, K.-O., Jung, C., Kim, J. J., Hong, J. H., Kim, H., Kim, J.-H., Kil, J.-I., Park, C. J., Oh, H.-M., Lee, J.-S., Jin, S.-J., Um, H.-W., Lee, H.-J., Oh, S.-J., Kim, J. Y., Kang, H. L., . . . Kang, H. S. (2005). The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4. Nature Biotechnology. https://doi.org/10.1038/nbt1045
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