Autophagy variation within a cell population determines cell fate through selective degradation of Fap-1
Open accessAbstract
Autophagy regulates cell death both positively and negatively, but the molecular basis for this paradox remains inadequately characterized. We demonstrate here that transient cell-to-cell variations in autophagy can promote either cell death or survival depending on the stimulus and cell type. By separating cells with high and low basal autophagy using flow cytometry, we demonstrate that autophagy determines which cells live or die in response to death receptor activation. We have determined that selective autophagic degradation of the phosphatase Fap-1 promotes Fas apoptosis in Type I cells, which do not require mitochondrial permeabilization for efficient apoptosis. Conversely, autophagy inhibits apoptosis in Type II cells (which require mitochondrial involvement) or on treatment with TRAIL in either Type I or II cells. These data illustrate that differences in autophagy in a cell population determine cell fate in a stimulus- and cell-type-specific manner. This example of selective autophagy of an apoptosis regulator may represent a general mechanism for context-specific regulation of cell fate by autophagy.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
FAS-driven extrinsic apoptosis is enhanced by autophagic degradation of PTPN13/FAP1.
“FAS-driven extrinsic apoptosis, which is enhanced by the autophagic degradation of protein tyrosine phosphatase, non-receptor type 13 (PTPN13; best known as FAP1) [822]”
From Molecular mechanisms of cell death: recommendations of the nomenclature committee on cell death 2018. (2018) · cites this paper as [822]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Autophagy fights disease through cellular self-digestion
Mizushima, N., Levine, B., Cuervo, A. M., & Klionsky, D. J. (2008) · Nature · doi:10.1038/nature06639 · Cited by 6,452 · see citing works
Guidelines for the use and interpretation of assays for monitoring autophagy
Klionsky, D. J., Abdalla, F. C., Abeliovich, H., Abraham, R. T., Acevedo-Arozena, A., Adeli, K., Agholme, L., Agnello, M., Agostinis, P., Aguirre-Ghiso, J. A., et al. (2012) · Autophagy · doi:10.4161/auto.19496 · Cited by 3,996 · see citing works
Self-eating and self-killing: crosstalk between autophagy and apoptosis
Maiuri, M. C., Zalckvar, E., Kimchi, A., & Kroemer, G. (2007) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2239 · Cited by 3,560 · see citing works
Autophagy and the Integrated Stress Response
Kroemer, G., Mariño, G., & Levine, B. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.09.023 · Cited by 3,506 · see citing works
Autophagy in Human Health and Disease
Choi, A. M. K., Ryter, S. W., & Levine, B. (2013) · New England Journal of Medicine · doi:10.1056/nejmra1205406 · Cited by 2,583 · see citing works
Kimura, S., Noda, T., & Yoshimori, T. (2007) · Autophagy · doi:10.4161/auto.4451 · Cited by 2,278 · see citing works
Deconvoluting the context-dependent role for autophagy in cancer
White, E. (2012) · Nature reviews. Cancer · doi:10.1038/nrc3262 · Cited by 1,698 · see citing works
Autophagy in cell death: an innocent convict?
Levine, B. (2005) · Journal of Clinical Investigation · doi:10.1172/jci26390 · Cited by 1,671 · see citing works
Stochastic State Transitions Give Rise to Phenotypic Equilibrium in Populations of Cancer Cells
Gupta, P. B., Fillmore, C. M., Jiang, G., Shapira, S. D., Tao, K., Kuperwasser, C., & Lander, E. S. (2011) · Cell · doi:10.1016/j.cell.2011.07.026 · Cited by 1,475 · see citing works
Autophagy-deficient mice develop multiple liver tumors
Takamura, A., Komatsu, M., Hara, T., Sakamoto, A., Kishi, C., Waguri, S., Eishi, Y., Hino, O., Tanaka, K., & Mizushima, N. (2011) · Genes & Development · doi:10.1101/gad.2016211 · Cited by 1,342 · see citing works
Activated Ras requires autophagy to maintain oxidative metabolism and tumorigenesis
Guo, J. Y., Chen, H.-Y., Mathew, R., Fan, J., Strohecker, A. M., Karsli-Uzunbas, G., Kamphorst, J. J., Chen, G., Lemons, J. M. S., Karantza, V., et al. (2011) · Genes & Development · doi:10.1101/gad.2016311 · Cited by 1,323 · see citing works
Calpain-mediated cleavage of Atg5 switches autophagy to apoptosis
Yousefi, S., Perozzo, R., Schmid, I., Ziemiecki, A., Schaffner, T. J., Scapozza, L., Brunner, T., & Simon, H. (2006) · Nature Cell Biology · doi:10.1038/ncb1482 · Cited by 1,300 · see citing works
A Role for Ubiquitin in Selective Autophagy
Kirkin, V., McEwan, D. G., Novak, I., & Đikić, I. (2009) · Molecular Cell · doi:10.1016/j.molcel.2009.04.026 · Cited by 1,227 · see citing works
Life and death partners: apoptosis, autophagy and the cross-talk between them
Eisenberg‐Lerner, A., Bialik, S., Simon, H.-U., & Kimchi, A. (2009) · Cell Death and Differentiation · doi:10.1038/cdd.2009.33 · Cited by 1,183 · see citing works
p62 at the crossroads of autophagy, apoptosis, and cancer
Moscat, J., & Diaz-Meco, M. T. (2009) · Cell · doi:10.1016/j.cell.2009.05.023 · Cited by 1,073 · see citing works
Principles and Current Strategies for Targeting Autophagy for Cancer Treatment
Amaravadi, R. K., Lippincott‐Schwartz, J., Yin, X., Weiss, W. A., Takebe, N., Timmer, W. C., DiPaola, R. S., Lotze, M. T., & White, E. (2011) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-10-2634 · Cited by 899 · see citing works
Variable Clonal Repopulation Dynamics Influence Chemotherapy Response in Colorectal Cancer
Kreso, A., O'Brien, C. A., van Galen, P., Gan, O. I., Notta, F., Brown, A. M. K., Ng, K., Ma, J., Wienholds, E., Dunant, C. F., et al. (2012) · Science · doi:10.1126/science.1227670 · Cited by 738 · see citing works
FAP-1: A Protein Tyrosine Phosphatase That Associates with Fas
Sato, T., Irie, S., Kitada, S., & Reed, J. C. (1995) · Science · doi:10.1126/science.7536343 · Cited by 683 · see citing works
Wirawan, E., Walle, L. V., Kersse, K., Cornelis, S., Claerhout, S., Vanoverberghe, I., Roelandt, R., Rycke, R. M. D., Verspurten, J., Declercq, W., et al. (2010) · Cell Death and Disease · doi:10.1038/cddis.2009.16 · Cited by 680 · see citing works
Autophagic programmed cell death by selective catalase degradation
Yu, L., Wan, F., Dutta, S., Welsh, S., Liu, Z., Freundt, E. C., Baehrecke, E. H., & Lenardo, M. J. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0511288103 · Cited by 668 · see citing works
Selective autophagy: ubiquitin-mediated recognition and beyond
Kraft, C., Peter, M., & Hofmann, K. (2010) · Nature Cell Biology · doi:10.1038/ncb0910-836 · Cited by 639 · see citing works
Jin, Z., Li, Y., Pitti, R. M., Lawrence, D. A., Pham, V. C., Lill, J. R., & Ashkenazi, A. (2009) · Cell · doi:10.1016/j.cell.2009.03.015 · Cited by 588 · see citing works
Autophagy and apoptosis: what is the connection?
Gump, J. M., & Thorburn, A. M. (2011) · Trends in Cell Biology · doi:10.1016/j.tcb.2011.03.007 · Cited by 492 · see citing works
Self-citationBarnhart, B. C., Alappat, E. C., & Peter, M. E. (2003) · Seminars in Immunology · doi:10.1016/s1044-5323(03)00031-9 · Cited by 419 · see citing works
Maycotte, P., & Thorburn, A. M. (2011) · Cancer Biology & Therapy · doi:10.4161/cbt.11.2.14627 · Cited by 394 · see citing works
Self-citationMolecular Ordering of the Initial Signaling Events of CD95
Algeciras-Schimnich, A., Shen, L., Barnhart, B. C., Murmann, A. E., Burkhardt, J. K., & Peter, M. E. (2002) · Molecular and Cellular Biology · doi:10.1128/mcb.22.1.207-220.2002 · Cited by 393 · see citing works
Young, M. M., Takahashi, Y., Khan, O. A., Park, S., Hori, T., Yun, J. K., Sharma, A. K., Amin, S., Hu, C., Zhang, J., et al. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.309104 · Cited by 372 · see citing works
Autophagic degradation of active caspase-8
Hou, W., Han, J., Lu, C., Goldstein, L. A., & Rabinowich, H. (2010) · Autophagy · doi:10.4161/auto.6.7.13038 · Cited by 356 · see citing works
The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy
Füllgrabe, J., Lynch-Day, M. A., Heldring, N., Li, W., Struijk, R. B., Ma, Q., Hermanson, O., Rosenfeld, M. G., Klionsky, D. J., & Joseph, B. (2013) · Nature · doi:10.1038/nature12313 · Cited by 325 · see citing works
Rubinstein, A. D., Eisenstein, M., Ber, Y., Bialik, S., & Kimchi, A. (2011) · Molecular Cell · doi:10.1016/j.molcel.2011.10.014 · Cited by 303 · see citing works
ATG12 Conjugation to ATG3 Regulates Mitochondrial Homeostasis and Cell Death
Radoshevich, L., Murrow, L., Chen, N., Fernandez, E., Roy, S., Fung, C., & Debnath, J. (2010) · Cell · doi:10.1016/j.cell.2010.07.018 · Cited by 290 · see citing works
Selective degradation of p62 by autophagy
Ichimura, Y., & Komatsu, M. (2010) · Seminars in Immunopathology · doi:10.1007/s00281-010-0220-1 · Cited by 242 · see citing works
Selective Autophagy in Cancer Development and Therapy
Đikić, I., Johansen, T., & Kirkin, V. (2010) · Cancer Research · doi:10.1158/0008-5472.can-09-4027 · Cited by 212 · see citing works
The in vitro cleavage of the hAtg proteins by cell death proteases
Norman, J., Cohen, G., & Bampton, E. (2010) · Autophagy · doi:10.4161/auto.6.8.13337 · Cited by 209 · see citing works
Selective Autophagy of the Adaptor Protein Bcl10 Modulates T Cell Receptor Activation of NF-κB
Paul, S., Kashyap, A. K., Jia, W., He, Y.-W., & Schaefer, B. C. (2012) · Immunity · doi:10.1016/j.immuni.2012.04.008 · Cited by 207 · see citing works
Bim Inhibits Autophagy by Recruiting Beclin 1 to Microtubules
Luo, S., Garcı́a-Arencibia, M., Zhao, R., Puri, C., Toh, P. P. C., Sadiq, O., & Rubinsztein, D. C. (2012) · Molecular Cell · doi:10.1016/j.molcel.2012.05.040 · Cited by 203 · see citing works
Yonekawa, T., & Thorburn, A. M. (2013) · Essays in Biochemistry · doi:10.1042/bse0550105 · Cited by 203 · see citing works
Self-citationmir-200c Regulates Induction of Apoptosis through CD95 by Targeting FAP-1
Schickel, R., Park, S.-M., Murmann, A. E., & Peter, M. E. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.05.018 · Cited by 167 · see citing works
Kaminskyy, V. O., Piskunova, T. S., Zborovskaya, I. B., Tchevkina, E. M., & Zhivotovsky, B. (2012) · Autophagy · doi:10.4161/auto.20123 · Cited by 165 · see citing works
A novel quantitative flow cytometry-based assay for autophagy
Eng, K. E., Panas, M. D., Hedestam, G. B. K., & McInerney, G. M. (2010) · Autophagy · doi:10.4161/auto.6.5.12112 · Cited by 151 · see citing works
Activation of autophagy during cell death requires the engulfment receptor Draper
Kary, C. S., Logan, M. A., Freeman, M. R., & Baehrecke, E. H. (2010) · Nature · doi:10.1038/nature09127 · Cited by 138 · see citing works
Hundeshagen, P., Hamacher‐Brady, A., Eils, R., & Brady, N. R. (2011) · BMC Biology · doi:10.1186/1741-7007-9-38 · Cited by 126 · see citing works
FAP-1 Association with Fas (Apo-1) Inhibits Fas Expression on the Cell Surface
Ivanov, V. N., Lopez‐Bergami, P., Maulit, G., Sato, T., Sassoon, D. A., & Ronai, Z. A. (2003) · Molecular and Cellular Biology · doi:10.1128/mcb.23.10.3623-3635.2003 · Cited by 111 · see citing works
Makni, H., Franco, E. L., Kaiano, J. H. L., Villa, L. L., Labrecque, S., Dudley, R., Storey, A., & Matlashewski, G. (2000) · International Journal of Cancer · doi:10.1002/1097-0215(20000815)87:4 · Cited by 99 · see citing works
Ying, J., Li, H., Cui, Y., Wong, A., Langford, C., & Tao, Q. (2006) · Leukemia · doi:10.1038/sj.leu.2404193 · Cited by 87 · see citing works
Gaudet, S., Spencer, S. L., Chen, W. W., & Sorger, P. K. (2012) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002482 · Cited by 86 · see citing works
Schmitz, I., Walczak, H., Krammer, P. H., & Peter, M. E. (1999) · Cell Death and Differentiation · doi:10.1038/sj.cdd.4400569 · Cited by 84 · see citing works
Protein tyrosine phosphatase PTPN13 negatively regulates Her2/ErbB2 malignant signaling
Zhu, J.-H., Chen, R., Yi, W., Cantin, G. T., Fearns, C., Yang, Y. C., Yates, J. R., & Lee, J. ‐. (2007) · Oncogene · doi:10.1038/sj.onc.1210922 · Cited by 76 · see citing works
Autophagy regulation in cancer development and therapy.
White, E. J., Martı́n, V., Liu, J.-L., Klein, S. R., Piya, S., Gomez‐Manzano, C., Fueyo-Margareto, J., & Jiang, H. (2011) · Europe PMC (PubMed Central) · Cited by 75 · see citing works
Ivanov, V. N., Ronai, Z. A., & Hei, T. K. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m509866200 · Cited by 75 · see citing works
Expression and Potential Role of Fas-Associated Phosphatase-1 in Ovarian Cancer
Meinhold-Heerlein, I. M., Stenner, F., Liewen, H., Kitada, S., Krajewska, M., Krajewski, S., Zapata, J. M., Monks, A. P., Scudiero, D. A., Bauknecht, T., et al. (2001) · American Journal Of Pathology · doi:10.1016/s0002-9440(10)64084-9 · Cited by 69 · see citing works
Yeh, S., Wu, D.-C., Tsai, C.-Y., Kuo, T.-J., Yu, W.-C., Chang, Y.-S., Chen, C., Chang, C.-F., Chen, D., & Chen, P. (2006) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-05-1383 · Cited by 60 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Galluzzi, L., Vitale, I., Aaronson, S. A., Abrams, J. M., Adam, D., Agostinis, P., Alnemri, E. S., Altucci, L., Amelio, I., Andrews, D. W., et al. (2018) · Cell Death & Differentiation · doi:10.1038/s41418-017-0012-4 · Cited by 6,680 · see citing works
The molecular machinery of regulated cell death
Tang, D., Kang, R., Berghe, T. V., Vandenabeele, P., & Kroemer, G. (2019) · Cell Research · doi:10.1038/s41422-019-0164-5 · Cited by 2,595 · see citing works
Levy, J. M. M., Towers, C. G., & Thorburn, A. (2017) · Nature Reviews Cancer · doi:10.1038/nrc.2017.53 · Cited by 2,526 · see citing works
Self-citationAutophagy promotes immune evasion of pancreatic cancer by degrading MHC-I
Yamamoto, K., Venida, A., Yano, J., Biancur, D. E., Kakiuchi, M., Gupta, S., Sohn, A. S. W., Mukhopadhyay, S., Lin, E. Y., Parker, S. J., et al. (2020) · Nature · doi:10.1038/s41586-020-2229-5 · Cited by 1,240 · see citing works
Autophagy: Regulator of cell death
Liu, S., Yao, S., Yang, H., Liu, S., & Wang, Y. (2023) · Cell Death and Disease · doi:10.1038/s41419-023-06154-8 · Cited by 1,199 · see citing works
Ferroptosis is a type of autophagy-dependent cell death
Zhou, B., Liu, J., Kang, R., Klionsky, D. J., Kroemer, G., & Tang, D. (2019) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2019.03.002 · Cited by 1,072 · see citing works
To Be or Not to Be? How Selective Autophagy and Cell Death Govern Cell Fate
Green, D. R., & Levine, B. (2014) · Cell · doi:10.1016/j.cell.2014.02.049 · Cited by 687 · see citing works
Metabolic control of cell death
Green, D. R., Galluzzi, L., & Kroemer, G. (2014) · Science · doi:10.1126/science.1250256 · Cited by 661 · see citing works
Doherty, J., & Baehrecke, E. H. (2018) · Nature Cell Biology · doi:10.1038/s41556-018-0201-5 · Cited by 626 · see citing works
An Autophagic Flux Probe that Releases an Internal Control
Kaizuka, T., Morishita, H., Hama, Y., Tsukamoto, S., Matsui, T., Toyota, Y., Kodama, A., Ishihara, T., Mizushima, T., & Mizushima, N. (2016) · Molecular Cell · doi:10.1016/j.molcel.2016.09.037 · Cited by 580 · see citing works
Autophagy is essential for effector CD8+ T cell survival and memory formation
Xu, X., Araki, K., Li, S., Han, J., Ye, L., Tan, W. G., Konieczny, B. T., Bruinsma, M. W., Martinez, J., Pearce, E. L., et al. (2014) · Nature Immunology · doi:10.1038/ni.3025 · Cited by 431 · see citing works
Copper is an essential regulator of the autophagic kinases ULK1/2 to drive lung adenocarcinoma
Tsang, T., Posimo, J. M., Gudiel, A. A., Cicchini, M., Feldser, D. M., & Brady, D. C. (2020) · Nature Cell Biology · doi:10.1038/s41556-020-0481-4 · Cited by 373 · see citing works
The Autophagy Machinery Controls Cell Death Switching between Apoptosis and Necroptosis
Goodall, M. L., Fitzwalter, B. E., Zahedi, S., Wu, M., Rodriguez, D., Mulcahy-Levy, J. M., Green, D. R., Morgan, M., Cramer, S. D., & Thorburn, A. (2016) · Developmental Cell · doi:10.1016/j.devcel.2016.04.018 · Cited by 314 · see citing works
Self-citationAutophagy-dependent cell death—where.; how and why a cell eats itself to death
Bialik, S., Dasari, S. K., & Kimchi, A. (2018) · Journal of Cell Science · doi:10.1242/jcs.215152 · Cited by 295 · see citing works
Thorburn, A. M., Thamm, D. H., & Gustafson, D. L. (2014) · Molecular Pharmacology · doi:10.1124/mol.114.091850 · Cited by 281 · see citing works
Self-citationThe STING1 network regulates autophagy and cell death
Zhang, R., Kang, R., & Tang, D. (2021) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-021-00613-4 · Cited by 256 · see citing works
Chloroquine and hydroxychloroquine for cancer therapy
Manic, G., Obrist, F., Kroemer, G., Vitale, I., & Galluzzi, L. (2014) · Molecular & Cellular Oncology · doi:10.4161/mco.29911 · Cited by 223 · see citing works
Zinc oxide nanoparticles harness autophagy to induce cell death in lung epithelial cells
Zhang, J., Qin, X., Wang, B., Xu, G., Qin, Z., Wang, J., Wu, L., Ju, X., Bose, D. D., Qiu, F., et al. (2017) · Cell Death and Disease · doi:10.1038/cddis.2017.337 · Cited by 209 · see citing works
Autophagy Inhibition Mediates Apoptosis Sensitization in Cancer Therapy by Relieving FOXO3a Turnover
Fitzwalter, B. E., Towers, C. G., Sullivan, K. D., Andrysík, Z., Hoh, M., Ludwig, M. P., O’Prey, J., Ryan, K. M., Espinosa, J. M., Morgan, M. J., et al. (2018) · Developmental Cell · doi:10.1016/j.devcel.2018.02.014 · Cited by 208 · see citing works
Self-citationRecent insights into cell death and autophagy
Fitzwalter, B. E., & Thorburn, A. M. (2015) · FEBS Journal · doi:10.1111/febs.13515 · Cited by 171 · see citing works
Self-citationXu, R., Ji, Z., Chen, X., & Zhu, J. (2018) · Medicine · doi:10.1097/md.0000000000012912 · Cited by 172 · see citing works
Autophagy as initiator or executioner of cell death
Minina, E. A., Bozhkov, P. V., & Hofius, D. (2014) · Trends in Plant Science · doi:10.1016/j.tplants.2014.07.007 · Cited by 163 · see citing works
Zhang, Y., Zhang, Y. W., Jin, X., Zhou, X.-H., Dong, X.-H., Yu, W., & Gao, W. (2019) · Molecules · doi:10.3390/molecules24091838 · Cited by 153 · see citing works
Li, R., Ji, Z., Qin, H., Kang, X., Sun, B., Wang, M., Chang, C. H., Wang, X., Zhang, H., Zou, H., et al. (2014) · ACS Nano · doi:10.1021/nn505002w · Cited by 150 · see citing works
Non-oncogene Addiction to SIRT3 Plays a Critical Role in Lymphomagenesis
Li, M., Chiang, Y., Lyssiotis, C. A., Teater, M. R., Hong, J. Y., Shen, H., Wang, L., Hu, J., Jing, H., Chen, Z., et al. (2019) · Cancer Cell · doi:10.1016/j.ccell.2019.05.002 · Cited by 141 · see citing works
Autophagy and cancer: Modulation of cell death pathways and cancer cell adaptations
Towers, C. G., Wodetzki, D., & Thorburn, A. M. (2019) · The Journal of Cell Biology · doi:10.1083/jcb.201909033 · Cited by 139 · see citing works
Self-citationInsights on the crosstalk among different cell death mechanisms
Eskander, G., AbdelHamid, S. G., Wahdan, S. A., & Radwan, S. M. (2025) · Cell Death Discovery · doi:10.1038/s41420-025-02328-9 · Cited by 143 · see citing works
Selective autophagy: Xenophagy
Bauckman, K., Owusu‐Boaitey, N., & Mysorekar, I. U. (2014) · Methods · doi:10.1016/j.ymeth.2014.12.005 · Cited by 127 · see citing works
Redox signaling: Potential arbitrator of autophagy and apoptosis in therapeutic response
Zhang, L., Wang, K., Lei, Y., Li, Q., Nice, E. C., & Huang, C. (2015) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2015.08.030 · Cited by 126 · see citing works
The role of interaction between autophagy and apoptosis in tumorigenesis (Review)
Xi, H., Wang, S., Wang, B., Hong, X., Liu, X., Li, M., Shen, R., & Dong, Q. (2022) · Oncology Reports · doi:10.3892/or.2022.8423 · Cited by 124 · see citing works
Intersections between Regulated Cell Death and Autophagy
Napoletano, F., Baron, O., Vandenabeele, P., Mollereau, B., & Fanto, M. (2019) · Trends in Cell Biology · doi:10.1016/j.tcb.2018.12.007 · Cited by 118 · see citing works
Autophagy Controls the Kinetics and Extent of Mitochondrial Apoptosis by Regulating PUMA Levels
Thorburn, J., Andrysík, Z., Staskiewicz, L., Gump, J. M., Maycotte, P., Oberst, A., Green, D. R., Espinosa, J. M., & Thorburn, A. M. (2014) · Cell Reports · doi:10.1016/j.celrep.2014.02.036 · Cited by 118 · see citing works
Self-citationLin, Y., Wang, H., Hsu, Y., Cho, C.-L., Yang, M., & Chien, C. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18071343 · Cited by 111 · see citing works
Autophagy in Cancer Cell Death
Linder, B., & Kögel, D. (2019) · Biology · doi:10.3390/biology8040082 · Cited by 107 · see citing works
The lipid basis of cell death and autophagy
Lin, Z., Long, F., Kang, R., Klionsky, D. J., Yang, M., & Tang, D. (2023) · Autophagy · doi:10.1080/15548627.2023.2259732 · Cited by 106 · see citing works
Zhang, P., Lai, Z., Chen, H., Zhang, M., Wang, A., Jia, T., Sun, W., Zhu, X., Chen, X., Zhao, Z., et al. (2017) · Journal of Experimental & Clinical Cancer Research · doi:10.1186/s13046-017-0661-7 · Cited by 104 · see citing works
RetractedRegulation of autophagy and chloroquine sensitivity by oncogenic RAS in vitro is context-dependent
Morgan, M. J., Gamez, G., Menke, C., Hernandez, A. L., Thorburn, J., Gidan, F., Staskiewicz, L., Morgan, S. C., Cummings, C. T., Maycotte, P., et al. (2014) · Autophagy · doi:10.4161/auto.32135 · Cited by 102 · see citing works
Self-citationSorting cells for basal and induced autophagic flux by quantitative ratiometric flow cytometry
Gump, J. M., & Thorburn, A. M. (2014) · Autophagy · doi:10.4161/auto.29394 · Cited by 102 · see citing works
Self-citationMechanisms and biological functions of autophagy in diseased and ageing kidneys
Fougeray, S., & Pallet, N. (2014) · Nature Reviews Nephrology · doi:10.1038/nrneph.2014.201 · Cited by 101 · see citing works
Autophagy and Its Effects: Making Sense of Double-Edged Swords
Thorburn, A. M. (2014) · PLoS Biology · doi:10.1371/journal.pbio.1001967 · Cited by 100 · see citing works
Self-citationInitiation of follicular atresia: gene networks during early atresia in pig ovaries.
Zhang, J.-B., Liu, Y., Yao, W., Li, Q.-F., Liu, H.-L., & Pan, Z. (2018) · Reproduction · doi:10.1530/rep-18-0058 · Cited by 81 · see citing works
Gui, D., Cui, Z., Zhang, L., Chang, Y., Yao, D., Xu, M., Chen, M., Wu, P., Li, G., Wang, L., et al. (2017) · BMC Pulmonary Medicine · doi:10.1186/s12890-017-0477-4 · Cited by 98 · see citing works
Sperm freezing damage: the role of regulated cell death
Hai, E., Li, B., Zhang, J., & Zhang, J. (2024) · Cell Death Discovery · doi:10.1038/s41420-024-02013-3 · Cited by 106 · see citing works
Signalome-wide RNAi screen identifies GBA1 as a positive mediator of autophagic cell death
Dasari, S. K., Bialik, S., Levin-Zaidman, S., Levin-Salomon, V., Merrill, A. H., Futerman, A. H., & Kimchi, A. (2017) · Cell Death & Differentiation · doi:10.1038/cdd.2017.80 · Cited by 95 · see citing works
Programmed Cell Death in Sepsis Associated Acute Kidney Injury
Wu, Z., Deng, J., Zhou, H., Tan, W., Lin, L., & Yang, J. (2022) · Frontiers in Medicine · doi:10.3389/fmed.2022.883028 · Cited by 97 · see citing works
Crosstalk between apoptosis and autophagy signaling pathways
(2020) · International Review of Cell and Molecular Biology · doi:10.1016/bs.ircmb.2020.01.003 · Cited by 92 · see citing works
Autoimmune lymphoproliferative syndrome-like disease in patients with LRBA mutation
Revel‐Vilk, S., Fischer, U., Keller, B., Nabhani, S., Gámez-Díaz, L. Y., Rensing‐Ehl, A., Gombert, M., Hönscheid, A., Saleh, H., Shaag, A., et al. (2015) · Clinical Immunology · doi:10.1016/j.clim.2015.04.007 · Cited by 93 · see citing works
The Interconnections between Autophagy and Integrin-Mediated Cell Adhesion
Vlahakis, A., & Debnath, J. (2016) · Journal of Molecular Biology · doi:10.1016/j.jmb.2016.11.027 · Cited by 85 · see citing works
Cell death in drug-induced liver injury
Iorga, A., & Dara, L. (2019) · Advances in pharmacology · doi:10.1016/bs.apha.2019.01.006 · Cited by 87 · see citing works
Regulated Necrosis in Pulmonary Disease. A Focus on Necroptosis and Ferroptosis
Minagawa, S., Yoshida, M., Araya, J., Hara, H., Imai, H., & Kuwano, K. (2020) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/rcmb.2019-0337tr · Cited by 86 · see citing works
Tang, Z.-H., Chen, X., Wang, Z., Chai, K., Wang, Y., Xu, X.-H., Wang, X., Lu, J., Wang, Y., Chen, X., et al. (2016) · Scientific Reports · doi:10.1038/srep26241 · Cited by 84 · see citing works
Feng, T., Tang, Z., Karges, J., Shen, J., Jin, C., Chen, Y., Pan, Y., He, Y., Ji, L., & Chao, H. (2023) · Biomaterials · doi:10.1016/j.biomaterials.2023.122212 · Cited by 84 · see citing works
Thorburn, A. M. (2017) · Journal of Biological Chemistry · doi:10.1074/jbc.r117.810739 · Cited by 80 · see citing works
Self-citationSMAC Mimetics Induce Autophagy-Dependent Apoptosis of HIV-1-Infected Resting Memory CD4+ T Cells
Campbell, G. R., Bruckman, R. S., Chu, Y.-L., Trout, R. N., & Spector, S. A. (2018) · Cell Host & Microbe · doi:10.1016/j.chom.2018.09.007 · Cited by 79 · see citing works
Luo, P., Yan, H., Du, J., Chen, X., Shao, J., Zhang, Y., Xu, Z., Jin, Y. H., Lin, N., Yang, B., et al. (2020) · Autophagy · doi:10.1080/15548627.2020.1851492 · Cited by 78 · see citing works
Sun, J., Feng, Y., Wang, Y., Ji, Q., Cai, G., Shi, L., Wang, Y., Huang, Y., Zhang, J., & Li, Q. (2019) · International Journal of Oncology · doi:10.3892/ijo.2019.4757 · Cited by 78 · see citing works
Huang, Q., Ou, Y., Tao, Y., Yin, H., & Tu, P. (2016) · APOPTOSIS · doi:10.1007/s10495-016-1243-4 · Cited by 74 · see citing works
Autophagy, Oxidative Stress and Cancer Development
Taucher, E., Mykoliuk, I., Fediuk, M., & Smolle‐Jüttner, F. (2022) · Cancers · doi:10.3390/cancers14071637 · Cited by 74 · see citing works
RIP1 negatively regulates basal autophagic flux through TFEB to control sensitivity to apoptosis
Yonekawa, T., Gamez, G., Kim, J., Tan, A. C., Thorburn, J., Gump, J. M., Thorburn, A. M., & Morgan, M. J. (2015) · EMBO Reports · doi:10.15252/embr.201439496 · Cited by 71 · see citing works
Self-citationORP8 acts as a lipophagy receptor to mediate lipid droplet turnover
Pu, M., Zheng, W., Zhang, H., Wan, W., Peng, C., Chen, X., Liu, X., Xu, Z., Zhou, T., Sun, Q., et al. (2022) · Protein & Cell · doi:10.1093/procel/pwac063 · Cited by 71 · see citing works
Tang, Z.-H., Cao, W.-X., Wang, Z., Lu, J., Liu, B., Chen, X., & Lu, J.-J. (2017) · Redox Biology · doi:10.1016/j.redox.2017.03.009 · Cited by 69 · see citing works
Roles of autophagy in HIV infection
Dinkins, C., Pilli, M., & Kehrl, J. H. (2014) · Immunology and Cell Biology · doi:10.1038/icb.2014.88 · Cited by 67 · see citing works
Li, L., Wang, Y., Jiao, L., Lin, C., Lu, C., Zhang, K., Hu, C., Ye, J., Zhang, D., Wu, H., et al. (2019) · Cancer Letters · doi:10.1016/j.canlet.2019.03.027 · Cited by 67 · see citing works
Autophagy Stimulation Abrogates Herpes simplex Virus-1 Infection
Yakoub, A. M., & Shukla, D. (2015) · Scientific Reports · doi:10.1038/srep09730 · Cited by 66 · see citing works
Poly-ADP-ribosylation of HMGB1 regulates TNFSF10/TRAIL resistance through autophagy
Yang, M., Liu, L., Xie, M., Sun, X., Yu, Y. H., Kang, R., Yang, L., Zhu, S., Cao, L., & Tang, D. (2015) · Autophagy · doi:10.4161/15548627.2014.994400 · Cited by 64 · see citing works
Ma, L., Wang, Z., Xie, M., Quan, Y., Zhu, W., Yang, F., Zhao, C., Fan, Y. J., Fang, N., Jiang, H., et al. (2020) · Cell Death and Disease · doi:10.1038/s41419-020-2352-0 · Cited by 64 · see citing works
Cross talk between autophagy and oncogenic signaling pathways and implications for cancer therapy
Zada, S., Hwang, J. S., Ahmed, M., Lai, T. H., Pham, T. M., Elashkar, O., & Kim, D. R. (2021) · Biochimica et Biophysica Acta (BBA) - Reviews on Cancer · doi:10.1016/j.bbcan.2021.188565 · Cited by 64 · see citing works
Niture, S. K., Gyamfi, M. A., Lin, M., Chimeh, U., Dong, X., Zheng, W., Moore, J. T., & Kumar, D. (2020) · Cell Death and Disease · doi:10.1038/s41419-020-2369-4 · Cited by 62 · see citing works
The different roles of selective autophagic protein degradation in mammalian cells
Wang, D., Peng, Z.-J., Ren, G.-F., & Wang, G. (2015) · Oncotarget · doi:10.18632/oncotarget.5776 · Cited by 60 · see citing works
Proteinuria causes dysfunctional autophagy in the proximal tubule
Nolin, A. C., Mulhern, R. M., Panchenko, M. V., Pisarek-Horowitz, A., Wang, Z., Shirihai, O., Borkan, S. C., & Havasi, A. (2016) · American Journal of Physiology-Renal Physiology · doi:10.1152/ajprenal.00125.2016 · Cited by 58 · see citing works
The inducible role of autophagy in cell death: emerging evidence and future perspectives
Huang, X., Yan, H., Xu, Z., Yang, B., Luo, P., & He, Q. (2025) · Cell Communication and Signaling · doi:10.1186/s12964-025-02135-w · Cited by 57 · see citing works
Impact of Autophagy in Oncolytic Adenoviral Therapy for Cancer
Tazawa, H., Kuroda, S., Hasei, J., Kagawa, S., & Fujiwara, T. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18071479 · Cited by 56 · see citing works
Chen, Z., Nie, S., Qu, M., Zhou, D., Wu, L., Shi, X., Ma, L.-R., Li, X., Zhou, S., Wang, S., et al. (2018) · Cell Death and Disease · doi:10.1038/s41419-018-0795-3 · Cited by 55 · see citing works
Zhou, L., Huo, M., Qian, X., Ding, L., Yu, L., Feng, W., Cui, X., & Chen, Y. (2021) · Journal of Nanobiotechnology · doi:10.1186/s12951-021-00855-y · Cited by 53 · see citing works
The interplay of autophagy and non-apoptotic cell death pathways
(2020) · International Review of Cell and Molecular Biology · doi:10.1016/bs.ircmb.2019.12.004 · Cited by 50 · see citing works
Self-citationConnexins: substrates and regulators of autophagy
Iyyathurai, J., Decuypere, J.-P., Leybaert, L., D’hondt, C., & Bultynck, G. (2016) · BMC Cell Biology · doi:10.1186/s12860-016-0093-9 · Cited by 51 · see citing works
Necroptosis in amyotrophic lateral sclerosis and other neurological disorders
Morrice, J. R., Gregory, C. Y., & Shaw, C. A. (2016) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2016.11.025 · Cited by 50 · see citing works
Tang, Z.-H., Zhang, L., Li, T., Lu, J., Ma, D., Leung, C., Chen, X., Jiang, H., Wang, Y., & Lu, J.-J. (2015) · Oncotarget · doi:10.18632/oncotarget.6084 · Cited by 48 · see citing works
Suppression of mTOR pathway and induction of autophagy-dependent cell death by cabergoline
Lin, S., Leng, Z. G., Guo, Y., Cai, L., Cai, Y. C., Li, N., Shang, H. B., Le, W.-D., Zhao, W., & Wu, Z. B. (2015) · Oncotarget · doi:10.18632/oncotarget.5744 · Cited by 47 · see citing works
Galindo‐Moreno, M., Giráldez, S., Sáez, C., Japón, M. Á., Tortolero, M., & Romero, F. (2017) · Scientific Reports · doi:10.1038/s41598-017-10506-8 · Cited by 44 · see citing works
The impact of non-genetic heterogeneity on cancer cell death
Inde, Z., & Dixon, S. J. (2017) · Critical Reviews in Biochemistry and Molecular Biology · doi:10.1080/10409238.2017.1412395 · Cited by 40 · see citing works
Bamberg, A., Redente, E. F., Groshong, S. D., Tuder, R. M., Cool, C. D., Keith, R. C., Edelman, B., Black, B. P., Cosgrove, G. P., Wynes, M. W., et al. (2018) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/rccm.201707-1497oc · Cited by 42 · see citing works
Self-citationThe complex interplay between autophagy and cell death pathways
Ploumi, C., Papandreou, M.-E., & Tavernarakis, N. (2022) · Biochemical Journal · doi:10.1042/bcj20210450 · Cited by 38 · see citing works
Reactive Oxygen Species and Autophagy Modulation in Non-Marine Drugs and Marine Drugs
Farooqı, A. A., Fayyaz, S., Hou, M., Li, K.-T., Tang, J., & Chang, H. (2014) · Marine Drugs · doi:10.3390/md12115408 · Cited by 39 · see citing works
Yadav, R. K., Lee, G., Lee, H.-Y., Li, B., Jung, H.-E., Rashid, H.-O., Choi, M. K., Yadav, B. K., Kim, W. H., Kim, K., et al. (2015) · Autophagy · doi:10.1080/15548627.2015.1082021 · Cited by 38 · see citing works
Targeting Autophagy as a Strategy for Drug Discovery and Therapeutic Modulation
Gao, L., Jauregui, C. E., & Teng, Y. (2017) · Future Medicinal Chemistry · doi:10.4155/fmc-2016-0210 · Cited by 39 · see citing works
Lai, M., Rocca, V. L., Amato, R., Freer, G., & Pistello, M. (2019) · International Journal of Molecular Sciences · doi:10.3390/ijms20143436 · Cited by 38 · see citing works
Sargsyan, A., Cai, J., Fandino, L. B., Labasky, M. E., Forostyan, T., Colosimo, L. K., Thompson, S. J., & Graham, T. E. (2015) · Scientific Reports · doi:10.1038/srep12397 · Cited by 36 · see citing works
Optical Imaging Paves the Way for Autophagy Research
Wang, Y., Li, Y., Wei, F., & Duan, Y. (2017) · Trends in biotechnology · doi:10.1016/j.tibtech.2017.08.006 · Cited by 38 · see citing works
How autophagy can restore proteostasis defects in multiple diseases?
Joshi, V., Upadhyay, A., Prajapati, V. K., & Mishra, A. (2020) · Medicinal Research Reviews · doi:10.1002/med.21662 · Cited by 38 · see citing works
TNFAIP8 promotes prostate cancer cell survival by inducing autophagy
Niture, S. K., Ramalinga, M., Kedir, H., Patacsil, D., Niture, S. S., Li, J., Mani, H., Suy, S., Collins, S., & Kumar, D. (2018) · Oncotarget · doi:10.18632/oncotarget.25529 · Cited by 36 · see citing works
The Interplay Between Autophagy and Regulated Necrosis
Zhang, L., Cui, T., & Wang, X. (2022) · Antioxidants and Redox Signaling · doi:10.1089/ars.2022.0110 · Cited by 37 · see citing works
RETRACTED: Recent advances in glioblastoma multiforme therapy: A focus on autophagy regulation
Sanati, M., Binabaj, M. M., Ahmadi, S. S., Aminyavari, S., Javid, H., Mollazadeh, H., Bibak, B., Mohtashami, E., Jamialahmadi, T., Afshari, A. R., et al. (2022) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2022.113740 · Cited by 35 · see citing works
RetractedShen, S., Zhou, M., Huang, K., Wu, Y., Ma, Y., Wang, J., Ma, J., & Fan, S. (2017) · Cell Death and Disease · doi:10.1038/cddis.2017.441 · Cited by 35 · see citing works
Endosomes and Autophagy: Regulators of Pulmonary Endothelial Cell Homeostasis in Health and Disease
Chichger, H., Rounds, S., & Harrington, E. O. (2019) · Antioxidants and Redox Signaling · doi:10.1089/ars.2019.7817 · Cited by 34 · see citing works
Liang, L., Huan, L., Wang, J., Wu, Y., Huang, S., & He, X. (2021) · Cell Discovery · doi:10.1038/s41421-021-00339-1 · Cited by 34 · see citing works
Challenges of Regulated Cell Death: Implications for Therapy Resistance in Cancer
D’Amico, M., & Amicis, F. D. (2024) · Cells · doi:10.3390/cells13131083 · Cited by 33 · see citing works
Deng, L., Feng, Y., Ouyang, P., Chen, D., Huang, X., Guo, H., Deng, H., Fang, J., Lai, W., & Geng, Y. (2022) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2022.03.026 · Cited by 32 · see citing works
PTEN–PDZ domain interactions: Binding of PTEN to PDZ domains of PTPN13
Sotelo, N. S., Schepens, J. T. G., Valiente, M., Hendriks, W. J. A. J., & Pulido, R. (2014) · Methods · doi:10.1016/j.ymeth.2014.10.017 · Cited by 32 · see citing works
Interconnections among major forms of regulated cell death
Wu, C., Zhou, L., Yuan, H., & Wu, S. (2020) · APOPTOSIS · doi:10.1007/s10495-020-01632-2 · Cited by 32 · see citing works
- Authors
- Gump, J. M., Staskiewicz, L., Morgan, M. J., Bamberg, A., Riches, D. W. H., & Thorburn, A.
- Affiliations
- University of Colorado Anschutz (US)
- National Jewish Health (US)
- Corresponding author
- Thorburn, Andrew
- Venue
- Nature Cell Biology
- Published
- 2013-12-08
- Volume
- 16
- Issue
- 1
- Pages
- 47-54
- ISSN
- 1465-7392 (ISSN-L)
- 1476-4679
- PMC
- PMC3876036
- OpenAlex
- W2081826742
- Cited by
- 230
- References
- 52
- Citations by year
- 2026: 8 · 2025: 13 · 2024: 15 · 2023: 8 · 2022: 34 · 2021: 14 · 2020: 16 · 2019: 17 · 2018: 15 · 2017: 28 · 2016: 22 · 2015: 18 · 2014: 20 · 2013: 1
- FWCI
- 14.84
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Cell Biology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Cancer Center, University of Colorado
- Anschutz Medical Campus, University of Colorado
- National Heart, Lung, and Blood Institute (R01HL114754, R01HL068628, HL-68628)
- National Cancer Institute (CA 150925, 5T32CA82086-10, T32CA082086, P30 CA46934, R01CA150925, R01CA111421, P30CA046934)
- Topics
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Cell death mechanisms and regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Keywords
- autophagy, FAP-1, selective autophagy, cell fate, apoptosis, Fas, death receptor signaling, TRAIL, mitochondrial membrane permeabilization, cellular heterogeneity
- MeSH terms
- Sequestosome-1 Protein, Autophagy, Cell Survival, Chloroquine, Culture Media, HeLa Cells, Humans, Models, Biological, Protein Binding, Recombinant Fusion Proteins, Apoptosis, fas Receptor, Cell Lineage, Jurkat Cells, Adaptor Proteins, Signal Transducing, Cell Proliferation, Green Fluorescent Proteins, Fas Ligand Protein, Protein Tyrosine Phosphatase, Non-Receptor Type 13, Proteolysis
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review