Pyruvate carboxylation enables growth of SDH-deficient cells by supporting aspartate biosynthesis
Open accessAbstract
Succinate dehydrogenase (SDH) is a heterotetrameric nuclear-encoded complex responsible for the oxidation of succinate to fumarate in the tricarboxylic acid cycle. Loss-of-function mutations in any of the SDH genes are associated with cancer formation. However, the impact of SDH loss on cell metabolism and the mechanisms enabling growth of SDH-defective cells are largely unknown. Here, we generated Sdhb-ablated kidney mouse cells and used comparative metabolomics and stable-isotope-labelling approaches to identify nutritional requirements and metabolic adaptations to SDH loss. We found that lack of SDH activity commits cells to consume extracellular pyruvate, which sustains Warburg-like bioenergetic features. We further demonstrated that pyruvate carboxylation diverts glucose-derived carbons into aspartate biosynthesis, thus sustaining cell growth. By identifying pyruvate carboxylase as essential for the proliferation and tumorigenic capacity of SDH-deficient cells, this study revealed a metabolic vulnerability for potential future treatment of SDH-associated malignancies.
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SDH-defective cells upregulate pyruvate carboxylase protein expression in culture and in tumors to synthesize aspartate from glucose.
“To cope with TCA cycle truncation and still produce aspartate, SDH defective cells upregulate PC protein expression in culture and in tumors to synthesize aspartate from glucose (Cardaci et al., 2015; Lussey-Lepoutre et al., 2015).”
From Targeting Metabolism for Cancer Therapy (2017) · cites this paper as Cardaci et al., 2015
PC is essential for growth of SDH-mutant cells, which exhibit a truncated TCA cycle and require an alternative source of OAA.
“PC is essential for growth of succinate dehydrogenase (SDH)–mutant cells, which exhibit a truncated TCA cycle and thus require an alternative source of OAA to support TCA cycle function and sustain aspartate production for anabolic pathways (91, 92).”
From Regulation and function of the mammalian tricarboxylic acid cycle (2023) · cites this paper as [91]
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Cites
What is principal component analysis?
Ringnér, M. (2008) · Nature Biotechnology · doi:10.1038/nbt0308-303 · Cited by 2,407 · see citing works
Succinate links TCA cycle dysfunction to oncogenesis by inhibiting HIF-α prolyl hydroxylase
Selak, M. A., Armour, S. M., MacKenzie, E. D., Boulahbel, H., Watson, D. G., Mansfield, K. D., Pan, Y., Simon, M. C., Thompson, C. B., & Gottlieb, E. (2005) · Cancer Cell · doi:10.1016/j.ccr.2004.11.022 · Cited by 2,108 · cited 2× · see citing works
“Loss of SDH causes succinate accumulation in cells, which activates hypoxia-inducible factors at normal oxygen tension and inhibits α -ketoglutarate-dependent histone and DNA demethylases, thereby establishing, respectively, a pseudohypoxic and hypermethylator phenotype in tumours 14, 15, 16 .”
Self-citationManipulating the Mouse Embryo: A Laboratory Manual
Behringer, R. R., Gertsenstein, M., Nagy, K. V., & Nagy, A. (2002) · Cited by 2,046 · see citing works
Mutations in <i>SDHD</i> , a Mitochondrial Complex II Gene, in Hereditary Paraganglioma
Baysal, B. E., Ferrell, R. E., Willett-Brozick, J. E., Lawrence, E. C., Myssiorek, D., Bosch, A., Mey, A. V. D., Taschner, P. E. M., Rubinstein, W. S., Myers, E. N., et al. (2000) · Science · doi:10.1126/science.287.5454.848 · Cited by 1,638 · see citing works
Xiao, M., Yang, H., Xu, W., Ma, S., Lin, H., Zhu, H., Liu, L., Liu, Y., Yang, C., Xu, Y., et al. (2012) · Genes & Development · doi:10.1101/gad.191056.112 · Cited by 1,188 · cited 1× · see citing works
“Considering this limitation, the RNA interference-mediated silencing of SDH subunits in cancer cell allowed a partial understanding of cellular effects of mitochondrial complex II deficiency 14, 17, 18 .”
Astuti, D., Latif, F., Dallol, A., Dahia, P. L. M., Douglas, F., George, E., Sköldberg, F., Husebye, E. S., Eng, C., & Maher, E. R. (2001) · The American Journal of Human Genetics · doi:10.1086/321282 · Cited by 1,087 · see citing works
A Highly Efficient Recombineering-Based Method for Generating Conditional Knockout MutationsPreprint
Liu, P., Jenkins, N. A., & Copeland, N. G. (2003) · Genome Research · doi:10.1101/gr.749203 · Cited by 1,013 · see citing works
Assessment of mitochondrial respiratory chain enzymatic activities on tissues and cultured cells
Spinazzi, M., Casarin, A., Pertegato, V., Salviati, L., & Angelini, C. I. (2012) · Nature Protocols · doi:10.1038/nprot.2012.058 · Cited by 989 · see citing works
Mutations in SDHC cause autosomal dominant paraganglioma, type 3
Niemann, S., & Müller, U. (2000) · Nature Genetics · doi:10.1038/81551 · Cited by 875 · see citing works
SDH mutations establish a hypermethylator phenotype in paraganglioma
Letouzé, E., Martinelli, C., Loriot, C., Burnichon, N., Abermil, N., Ottolenghi, C., Janin, M., Menara, M., Nguyen, A. T., Benit, P., et al. (2013) · Cancer Cell · doi:10.1016/j.ccr.2013.04.018 · Cited by 776 · see citing works
SDHA is a tumor suppressor gene causing paraganglioma
Burnichon, N., Brière, J.-J., Libé, R., Vescovo, L., Rivière, J., Tissier, F., Jouanno, E., Jeunemaı̂tre, X., Bénit, P., Tzagoloff, A., et al. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq206 · Cited by 645 · see citing works
Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydratase
Frezza, C., Zheng, L., Folger, O., Rajagopalan, K. N., MacKenzie, E. D., Jerby, L., Micaroni, M., Chaneton, B., Adam, J., Hedley, A., et al. (2011) · Nature · doi:10.1038/nature10363 · Cited by 503 · see citing works
Self-citationPyruvate carboxylase is critical for non–small-cell lung cancer proliferation
Sellers, K., Fox, M. P., Bousamra, M., Slone, S. P., Higashi, R. M., Miller, D. M., Wang, Y., Yan, J., Yuneva, M. O., Deshpande, R., et al. (2015) · Journal of Clinical Investigation · doi:10.1172/jci72873 · Cited by 497 · see citing works
Pyruvate carboxylase is required for glutamine-independent growth of tumor cells
Cheng, T., Sudderth, J., Yang, C., Mullen, A. R., Jin, E. S., Matés, J. M., & DeBerardinis, R. J. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1016627108 · Cited by 475 · see citing works
Predicting selective drug targets in cancer through metabolic networks
Folger, O., Jerby‐Arnon, L., Frezza, C., Gottlieb, E., Ruppin, E., & Shlomi, T. (2011) · Molecular Systems Biology · doi:10.1038/msb.2011.35 · Cited by 469 · see citing works
Self-citationSmart, K. F., Aggio, R. B. M., Houtte, J. R. V., & Villas-Bôas, S. G. (2010) · Nature Protocols · doi:10.1038/nprot.2010.108 · Cited by 454 · see citing works
Guzy, R. D., Sharma, B., Bell, E., Chandel, N. S., & Schumacker, P. T. (2008) · Molecular and Cellular Biology · doi:10.1128/mcb.01338-07 · Cited by 427 · see citing works
Vanharanta, S., Buchta, M., McWhinney, S. R., Virta, S. K., Peçzkowska, M., Morrison, C. D., Lehtonen, R., Januszewicz, A., Järvinen, H., Juhola, M., et al. (2004) · The American Journal of Human Genetics · doi:10.1086/381054 · Cited by 389 · see citing works
Germline SDHB Mutations and Familial Renal Cell Carcinoma
Ricketts, C. J., Woodward, E. R., Killick, P., Morris, M. R., Astuti, D., Latif, F., & Maher, E. R. (2008) · JNCI Journal of the National Cancer Institute · doi:10.1093/jnci/djn254 · Cited by 341 · see citing works
Mullen, A. R., Hu, Z., Shi, X., Jiang, L., Boroughs, L. K., Kovacs, Z., Boriack, R., Rakheja, D., Sullivan, L. B., Linehan, W. M., et al. (2014) · Cell Reports · doi:10.1016/j.celrep.2014.04.037 · Cited by 337 · see citing works
Baysal, B. E., Willett-Brozick, J. E., Lawrence, E. C., Drovdlic, C. M., Savul, S. A., McLeod, D. R., Yee, H. A., Brackmann, D. E., Slattery, W. H., Myers, E. N., et al. (2002) · Journal of Medical Genetics · doi:10.1136/jmg.39.3.178 · Cited by 336 · see citing works
Mouse in red: Red fluorescent protein expression in mouse ES cells, embryos, and adult animals
Vintersten, K., Monetti, C., Gertsenstein, M., Zhang, P., László, L., Biechele, S., & Nagy, A. (2004) · genesis · doi:10.1002/gene.20095 · Cited by 319 · see citing works
Cardiolipin provides an essential activating platform for caspase-8 on mitochondria
Gonzalvez, F., Schug, Z. T., Houtkooper, R. H., MacKenzie, E. D., Brooks, D. G., Wanders, R. J. A., PETIT, P. X., Vaz, F. M., & Gottlieb, E. (2008) · The Journal of Cell Biology · doi:10.1083/jcb.200803129 · Cited by 297 · see citing works
Self-citationZhang, J., Nuebel, E., Wisidagama, D., Setoguchi, K., Hong, J. S., Horn, C. M. V., Imam, S. S., Vergnes, L., Malone, C., Koehler, C., et al. (2012) · Nature Protocols · doi:10.1038/nprot.2012.048 · Cited by 286 · see citing works
Fumarate induces redox-dependent senescence by modifying glutathione metabolism
Zheng, L., Cardaci, S., Jerby, L., MacKenzie, E. D., Sciacovelli, M., Johnson, T. I., Gaude, E., King, A., Leach, J. D. G., Edrada-Ebel, R., et al. (2015) · Nature Communications · doi:10.1038/ncomms7001 · Cited by 281 · see citing works
Self-citationDefects in mitochondrial metabolism and cancer
Gaude, E., & Frezza, C. (2014) · Cancer & Metabolism · doi:10.1186/2049-3002-2-10 · Cited by 249 · see citing works
Structure, function and regulation of pyruvate carboxylase
Jitrapakdee, S., & Wallace, J. C. (1999) · Biochemical Journal · doi:10.1042/bj3400001 · Cited by 244 · see citing works
Succinate Dehydrogenase Kidney Cancer: An Aggressive Example of the Warburg Effect in Cancer
Ricketts, C. J., Shuch, B. M., Vocke, C. D., Metwalli, A. R., Bratslavsky, G., Middelton, L. A., Yang, Y., Wei, M.-H., Pautler, S. E., Peterson, J. C., et al. (2012) · The Journal of Urology · doi:10.1016/j.juro.2012.08.030 · Cited by 239 · see citing works
The Warburg effect is genetically determined in inherited pheochromocytomas
Favier, J., Brière, J.-J., Burnichon, N., Rivière, J., Vescovo, L., Benit, P., Giscos-Douriez, I., De Reyniès, A., Bertherat, J., Badoual, C., et al. (2009) · PLoS ONE · doi:10.1371/journal.pone.0007094 · Cited by 232 · see citing works
Kamphorst, J. J., Chung, M. K., Fan, J., & Rabinowitz, J. D. (2014) · Cancer & Metabolism · doi:10.1186/2049-3002-2-23 · Cited by 227 · see citing works
Self-citationWilliamson, S. R., Eble, J. N., Amin, M. B., Gupta, N., Smith, S. C., Sholl, L. M., Montironi, R., Hirsch, M. S., & Hornick, J. L. (2014) · Modern Pathology · doi:10.1038/modpathol.2014.86 · Cited by 226 · see citing works
Ni, Y., Zbuk, K. M., Sadler, T. M., Patócs, A., Lobo, G. P., Edelman, E. A., Platzer, P., Orloff, M. S., Waite, K. A., & Eng, C. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2008.07.011 · Cited by 219 · see citing works
Inborn and acquired metabolic defects in cancer
Frezza, C., Pollard, P. J., & Gottlieb, E. (2011) · Journal of Molecular Medicine · doi:10.1007/s00109-011-0728-4 · Cited by 146 · see citing works
Self-citationAnalysis of Mitochondrial Dynamics and Functions Using Imaging Approaches
Mitra, K., & Lippincott‐Schwartz, J. (2010) · Current Protocols in Cell Biology · doi:10.1002/0471143030.cb0425s46 · Cited by 137 · see citing works
Renal Tumors and Hereditary Pheochromocytoma-Paraganglioma Syndrome Type 4
Gill, A. J., Pachter, N., Clarkson, A., Tucker, K., Winship, I., Benn, D. E., Robinson, B. G., & Clifton-Bligh, R. J. (2011) · New England Journal of Medicine · doi:10.1056/nejmc1012357 · Cited by 106 · see citing works
Yang, Y., Lane, A. N., Ricketts, C. J., Sourbier, C., Wei, M.-H., Shuch, B. M., Pike, L. S., Wu, M., Rouault, T. A., Boros, L. G., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0072179 · Cited by 103 · see citing works
Reversed argininosuccinate lyase activity in fumarate hydratase-deficient cancer cells
Zheng, L., MacKenzie, E. D., Karim, S. A., Hedley, A., Blyth, K., Kalna, G., Watson, D. G., Szlosarek, P., Frezza, C., & Gottlieb, E. (2013) · Cancer & Metabolism · doi:10.1186/2049-3002-1-12 · Cited by 103 · see citing works
Self-citationA transgenic mouse strain expressing four drug-selectable marker genes
Tucker, K. L., Wang, Y., Dausman, J. A., & Jaenisch, R. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.18.3745 · Cited by 92 · see citing works
Glioma Cells with the IDH1 Mutation Modulate Metabolic Fractional Flux through Pyruvate Carboxylase
Izquierdo-García, J. L., Cai, L. M., Chaumeil, M. M., Eriksson, P., Robinson, A. E., Pieper, R. O., Phillips, J. J., & Ronen, S. M. (2014) · PLoS ONE · doi:10.1371/journal.pone.0108289 · Cited by 73 · see citing works
Housley, S. L., Lindsay, R. S., Young, B., McConachie, M., Mechan, D., Baty, D. U., Christie, L., Rahilly, M., Qureshi, K. N., & Fleming, S. (2010) · Histopathology · doi:10.1111/j.1365-2559.2010.03482.x · Cited by 65 · see citing works
Self-citationWhy Cancer & Metabolism? Why now?
Dang, C. V., & Pollak, M. (2013) · Cancer & Metabolism · doi:10.1186/2049-3002-1-1 · Cited by 41 · see citing works
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van der Weyden, L., Adams, D. J., Harris, L. W., Tannahill, D., Arends, M. J., & Bradley, A. (2005) · genesis · doi:10.1002/gene.20111 · Cited by 40 · see citing works
Chapter 5 Immortalized Mouse Epithelial Cell Models to Study the Role of Apoptosis in Cancer
Mathew, R., Degenhardt, K., Haramaty, L., Karp, C. M., & White, E. (2008) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(08)01605-4 · Cited by 27 · see citing works
Lockyer, J. N. (1878) · Nature · doi:10.1038/017225a0 · Cited by 1 · see citing works
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- [18]Xiao M Inhibition of α-KG-dependent histone and DNA demethylases by fumarate and succinate that are accumulated in mutations of FH and SDH tumour suppressors Genes Dev 2012 26 1326 1338 22677546 PMC3387660
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“PC is essential for growth of succinate dehydrogenase (SDH)– mutant cells, which exhibit a truncated TCA cycle and thus require an alternative source of OAA to support TCA cycle function and sustain aspartate production for anabolic pathways (91, 92).”
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- Authors
- Cardaci, S., Zheng, L., MacKay, G., van den Broek, N. J. F., MacKenzie, E. D., Nixon, C., Stevenson, D., Tumanov, S., Bulusu, V., Kamphorst, J. J., Vazquez, A., Fleming, S., Schiavi, F., Kalna, G., Blyth, K., Strathdee, D., & Gottlieb, E.
- Affiliations
- Cancer Research UK Scotland Institute (GB)
- University of Dundee (GB)
- Istituto Oncologico Veneto (IT)
- Corresponding author
- Gottlieb, Eyal
- ORCID
- Venue
- Nature Cell Biology
- Published
- 2015-08-24
- Volume
- 17
- Issue
- 10
- Pages
- 1317-1326
- ISSN
- 1465-7392 (ISSN-L)
- 1476-4679
- PMC
- PMC4591470
- OpenAlex
- W1483430612
- Cited by
- 286
- References
- 44
- Citations by year
- 2026: 18 · 2025: 22 · 2024: 22 · 2023: 34 · 2022: 29 · 2021: 24 · 2020: 22 · 2019: 29 · 2018: 24 · 2017: 25 · 2016: 31 · 2015: 6
- FWCI
- 9.38
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Cell Biology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam) (acceptedVersion)
- Discovery Research Portal (University of Dundee) (submittedVersion)
- Funders
- Cancer Research UK (A18278, 18278, 17728, 22311, 21140)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer, Hypoxia, and Metabolism
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Cancer and biochemical research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Amino Acid Enzymes and Metabolism
- Keywords
- succinate dehydrogenase, pyruvate carboxylation, pyruvate carboxylase, aspartate biosynthesis, Warburg effect, metabolic vulnerability, carcinogenesis, TCA cycle, cancer metabolism, metabolic reprogramming
- MeSH terms
- Animals, Aspartic Acid, Carboxylic Acids, Carcinoma, Renal Cell, Cell Line, Transformed, Cell Transformation, Neoplastic, Cells, Cultured, Humans, Kidney, Kidney Neoplasms, Male, Mice, Inbred BALB C, Mice, Inbred C57BL, Mice, Nude, Pyruvate Carboxylase, Succinate Dehydrogenase, Immunoblotting, Mice, Knockout, Pyruvic Acid, RNA Interference, Cell Proliferation, Metabolomics, Mice, 129 Strain
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