Reprogramming the assembly of unmodified DNA with a small molecule

Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid

WATSON, J. D., & CRICK, F. H. C. (1953) · Nature · doi:10.1038/171737a0 · Cited by 13,584 · see citing works

Circular dichroism: Principles and applications

Jones, C. J. (1995) · FEBS Letters · doi:10.1016/0014-5793(95)90057-8 · Cited by 2,477 · see citing works

Supramolecular Polymerization

de Greef, T. F. A., Smulders, M. M. J., Wolffs, M., Schenning, A. P. H. J., Sijbesma, R. P., & Meijer, E. W. (2009) · Chemical Reviews · doi:10.1021/cr900181u · Cited by 2,461 · see citing works

PNA hybridizes to complementary oligonucleotides obeying the Watson–Crick hydrogen-bonding rules

Egholm, M., Buchardt, O., Christensen, L., Behrens, C., Freier, S. M., Driver, D. A., Berg, R. H., Kim, S. K., Norden, B., & Nielsen, P. E. (1993) · Nature · doi:10.1038/365566a0 · Cited by 2,079 · see citing works

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?

Balasubramanian, S., Hurley, L. H., & Neidle, S. (2011) · Nature Reviews Drug Discovery · doi:10.1038/nrd3428 · Cited by 1,692 · see citing works

Mixed-ligand complexes of ruthenium(II): factors governing binding to DNA

Pyle, A., Rehmann, J. P., Meshoyrer, R., Kumar, C. V., TURRO, N. J., & Barton, J. K. (1989) · Journal of the American Chemical Society · doi:10.1021/ja00190a046 · Cited by 1,463 · see citing works

Circular Dichroism: Principles and Applications

Berova, N. D., 中西, 香., & Woody, R. W. (1994) · Cited by 1,264 · see citing works

Noncovalent Synthesis: Using Physical-Organic Chemistry To Make Aggregates

Whitesides, G. M., Simanek, E. E., Mathias, J. P., Seto, C. T., Chin, D. N., Mammen, M., & Gordon, D. M. (1995) · Accounts of Chemical Research · doi:10.1021/ar00049a006 · Cited by 1,030 · see citing works

Assembling Materials with DNA as the Guide

Aldaye, F. A., Palmer, A. L., & Sleiman, H. F. (2008) · Science · doi:10.1126/science.1154533 · Cited by 978 · see citing works

Peptide nucleic acids (PNA). Oligonucleotide analogs with an achiral peptide backbone

Egholm, M., Buchardt, O., Nielsen, P. E., & Berg, R. H. (1992) · Journal of the American Chemical Society · doi:10.1021/ja00031a062 · Cited by 739 · see citing works

Mechanisms and Consequences of Alternative Polyadenylation

Di Giammartino, D. C., Nishida, K., & Manley, J. L. (2011) · Molecular Cell · doi:10.1016/j.molcel.2011.08.017 · Cited by 737 · see citing works

Molecular structure of nucleic acids

Watson, J. D., & Crick, F. H. C. (2004) · Resonance · doi:10.1007/bf02834980 · Cited by 657 · see citing works

Enzymatic incorporation of a new base pair into DNA and RNA extends the genetic alphabet

Piccirilli, J. A., Benner, S. A., Krauch, T., Moroney, S. E., & Benner, S. A. (1990) · Nature · doi:10.1038/343033a0 · Cited by 638 · see citing works

A semi-synthetic organism with an expanded genetic alphabet

Malyshev, D. A., Dhami, K., Lavergne, T., Chen, T., Dai, N., Foster, J. M., Junior, I. R. C., & Romesberg, F. E. (2014) · Nature · doi:10.1038/nature13314 · Cited by 614 · see citing works

Nucleic Acid Based Molecular Devices

Krishnan, Y., & Simmel, F. C. (2011) · Angewandte Chemie International Edition · doi:10.1002/anie.200907223 · Cited by 569 · see citing works

Building Programmable Jigsaw Puzzles with RNA

Chworoś, A., Severcan, I., Koyfman, A. Y., Weinkam, P., Oroudjev, E., Hansma, H. G., & Jaeger, L. (2004) · Science · doi:10.1126/science.1104686 · Cited by 502 · see citing works

The molecular structure of polyadenylic acid

Rich, A., Davies, D. R., Crick, F. H. C., & Watson, J. D. (1961) · Journal of Molecular Biology · doi:10.1016/s0022-2836(61)80009-0 · Cited by 459 · see citing works

Conformational changes of non-B DNA

Choi, J., & Majima, T. (2011) · Chemical Society Reviews · doi:10.1039/c1cs15153c · Cited by 377 · see citing works

Programmable molecular recognition based on the geometry of DNA nanostructures

Woo, S., & Rothemund, P. W. K. (2011) · Nature Chemistry · doi:10.1038/nchem.1070 · Cited by 375 · see citing works

A single-stranded architecture for cotranscriptional folding of RNA nanostructures

Geary, C. W., Rothemund, P. W. K., & Andersen, E. S. (2014) · Science · doi:10.1126/science.1253920 · Cited by 365 · see citing works

A Novel Copper-Mediated DNA Base Pair

Meggers, E., Holland, P. L., Tolman, W. B., Romesberg, F. E., & Schultz, P. G. (2000) · Journal of the American Chemical Society · doi:10.1021/ja0025806 · Cited by 344 · see citing works

Translational control by changes in poly(A) tail length: recycling mRNAs

Weill, L., Belloc, E., Bava, F.-A., & Méndez, R. (2012) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2311 · Cited by 328 · see citing works

DNA-Multichromophore Systems

Teo, Y. N., & Kool, E. T. (2012) · Chemical Reviews · doi:10.1021/cr100351g · Cited by 327 · see citing works

Solid-state structures of rosette and crinkled tape motifs derived from the cyanuric acid melamine lattice

Zerkowski, J. A., Seto, C. T., & Whitesides, G. M. (1992) · Journal of the American Chemical Society · doi:10.1021/ja00039a096 · Cited by 306 · see citing works

An unnatural base pair system for efficient PCR amplification and functionalization of DNA molecules

Kimoto, M., Kawai, R., Mitsui, T., Yokoyama, S., & Hirao, I. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn956 · Cited by 192 · see citing works

Metal–nucleic acid cages

Yang, H. S., McLaughlin, C. K., Aldaye, F. A., Hamblin, G. D., Rys, A. Z., Rouiller, I., & Sleiman, H. F. (2009) · Nature Chemistry · doi:10.1038/nchem.290 · Cited by 167 · see citing works

Efforts toward the Expansion of the Genetic Alphabet: Information Storage and Replication with Unnatural Hydrophobic Base Pairs

Ogawa, A. K., Wu, Y., McMinn, D. L., Liu, J., Schultz, P. G., & Romesberg, F. E. (2000) · Journal of the American Chemical Society · doi:10.1021/ja9940064 · Cited by 162 · see citing works

Efficient self-assembly in water of long noncovalent polymers by nucleobase analogues

Cafferty, B. J., Gállego, I., Chen, M. C., Farley, K. I., Eritja, R., & Hud, N. V. (2013) · Journal of the American Chemical Society · doi:10.1021/ja312155v · Cited by 157 · see citing works

The poly dA helix: a new structural motif for high performance DNA-based molecular switches

Chakraborty, S., Sharma, S., Maiti, P. K., & Krishnan, Y. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp133 · Cited by 152 · see citing works

Functionalized base-pairs: versatile scaffolds for self-assembly

Sessler, J. L., & Jayawickramarajah, J. (2005) · Chemical Communications · doi:10.1039/b418526a · Cited by 152 · see citing works

A DNA pentaplex incorporating nucleobase quintets

Chaput, J. C., & Switzer, C. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.19.10614 · Cited by 128 · see citing works

Supramolecular assembly of melamine and its derivatives: nanostructures to functional materials

Roy, B., Bairi, P., & Nandi, A. K. (2013) · RSC Advances · doi:10.1039/c3ra44524k · Cited by 123 · see citing works

Expanded Genetic Alphabets in the Polymerase Chain Reaction

Yang, Z., Chen, F., Chamberlin, S. G., & Benner, S. A. (2009) · Angewandte Chemie International Edition · doi:10.1002/anie.200905173 · Cited by 122 · see citing works

Efforts toward Expansion of the Genetic Alphabet: Optimization of Interbase Hydrophobic Interactions

Wu, Y., Ogawa, A. K., Berger, M., McMinn, D. L., Schultz, P. G., & Romesberg, F. E. (2000) · Journal of the American Chemical Society · doi:10.1021/ja0009931 · Cited by 116 · see citing works

Self-complementary hydrogen bonding heterocycles designed for the enforced self-assembly into supramolecular macrocycles

Marsh, A., Silvestri, M. G., & Lehn, J. (1996) · Chemical Communications · doi:10.1039/cc9960001527 · Cited by 116 · see citing works

Complete disproportionation of duplex poly(dT)middle dotpoly(dA) into triplex poly(dT)middle dotpoly(dA)middle dotpoly(dT) and poly(dA) by coralyne

Polak, M. (2002) · Nucleic Acids Research · doi:10.1093/nar/30.4.983 · Cited by 116 · see citing works

Assembly of an Antiparallel Homo-Adenine DNA Duplex by Small-Molecule Binding

Çetinkol, Ö. P., Santai, C. T., Jain, S. S., & Hud, N. V. (2004) · Journal of the American Chemical Society · doi:10.1021/ja0492891 · Cited by 110 · see citing works

Controlling nucleic acid secondary structure by intercalation: effects of DNA strand length on coralyne-driven duplex disproportionation

Jain, S. S. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg648 · Cited by 107 · see citing works

Spontaneous Prebiotic Formation of a β-Ribofuranoside That Self-Assembles with a Complementary Heterocycle

Chen, M. C., Cafferty, B. J., Mamajanov, I., Gállego, I., Khanam, J., Krishnamurthy, R., & Hud, N. V. (2014) · Journal of the American Chemical Society · doi:10.1021/ja410124v · Cited by 94 · see citing works

Discrete Assembly of Synthetic Peptide–DNA Triplex Structures from Polyvalent Melamine–Thymine Bifacial Recognition

Zeng, Y., Pratumyot, Y., Piao, X., & Bong, D. T.-Y. (2011) · Journal of the American Chemical Society · doi:10.1021/ja2099326 · Cited by 90 · see citing works

NMR diffusion spectroscopy for the characterization of multicomponent hydrogen-bonded assemblies in solution

Timmerman, P., Weidmann, J.-L., Jolliffe, K. A., Prins, L. J., Reinhoudt, D. N., Shinkai, S., Frish, L., & Cohen, Y. (2000) · Journal of the Chemical Society Perkin Transactions 2 · doi:10.1039/b003968n · Cited by 88 · see citing works

Construction of RNA nanocages by re-engineering the packaging RNA of Phi29 bacteriophage

Hao, C., Li, X., Tian, C., Jiang, W., Wang, G., & Mao, C. (2014) · Nature Communications · doi:10.1038/ncomms4890 · Cited by 84 · see citing works

Molecular recognition of poly(A) by small ligands: an alternative method of analysis reveals nanomolar, cooperative and shape-selective binding

Çetinkol, Ö. P., & Hud, N. V. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn977 · Cited by 74 · see citing works

Determinants of Cyanuric Acid and Melamine Assembly in Water

Ma, M., & Bong, D. T.-Y. (2011) · Langmuir · doi:10.1021/la201415d · Cited by 69 · see citing works

Artificial Genetic Sets Composed of Size‐Expanded Base Pairs

Winnacker, M., & Kool, E. T. (2013) · Angewandte Chemie International Edition · doi:10.1002/anie.201305267 · Cited by 59 · see citing works

Oligonucleotide Duplexes and Multistrand Assemblies with 8-Aza-2′-deoxyisoguanosine: A Fluorescent isoGd Shape Mimic Expanding the Genetic Alphabet and Forming Ionophores

Jiang, D., & Seela, F. (2010) · Journal of the American Chemical Society · doi:10.1021/ja910020n · Cited by 54 · see citing works

Structure of the Parallel Duplex of Poly(A) RNA: Evaluation of a 50 Year‐Old Prediction

Safaee, N., Noronha, A. M., Rodionov, D., Kozlov, G., Wilds, C. J., Sheldrick, G. M., & Gehring, K. (2013) · Angewandte Chemie International Edition · doi:10.1002/anie.201303461 · Cited by 52 · see citing works

Base pairing equilibria between polynucleotides and complementary monomers

Davies, R. J. H., & Davidson, N. (1971) · Biopolymers · doi:10.1002/bip.360100904 · Cited by 50 · see citing works

A Janus-Wedge DNA Triplex with A-W1-T and G-W2-C Base Triplets

Chen, H., Meena, M., & McLaughlin, L. W. (2008) · Journal of the American Chemical Society · doi:10.1021/ja804607v · Cited by 48 · see citing works

Bifacial Nucleoside as a Surrogate for Both T and A in Duplex DNA

Shin, D., & Tor, Y. (2011) · Journal of the American Chemical Society · doi:10.1021/ja201397e · Cited by 41 · see citing works

A DNA-templated silver nanocluster probe for label-free, turn-on fluorescence-based screening of homo-adenine binding molecules

Park, K. S., & Park, H. G. (2014) · Biosensors and Bioelectronics · doi:10.1016/j.bios.2014.10.003 · Cited by 33 · see citing works

Synthetic Incorporation of Metal Complexes into Nucleic Acids and Peptides Directed toward Functionalized Molecules

Shionoya, M., & Tanaka, K. G. (2000) · Bulletin of the Chemical Society of Japan · doi:10.1246/bcsj.73.1945 · Cited by 28 · see citing works

The Selective Synthesis of Metallanucleosides and Metallanucleotides: A New Tool for the Functionalization of Nucleic Acids

Martín‐Ortiz, M., Gómez‐Gallego, M., de Arellano, C. R., & Sierra, M. Á. (2012) · Chemistry - A European Journal · doi:10.1002/chem.201202327 · Cited by 27 · see citing works

Janus-type AT nucleosides: synthesis, solid and solution state structures

Pan, M.-Y., Hang, W., Zhao, X., Zhao, H., Deng, P., Xing, Z., Qing, Y., & He, Y. (2011) · Organic & Biomolecular Chemistry · doi:10.1039/c1ob05577a · Cited by 27 · see citing works

Hydrogen-bond self-assembly of DNA-analogues into hexameric rosettes

Rakotondradany, F., Palmer, A., Toader, V., Chen, B., Whitehead, M. A., & Sleiman, H. F. (2005) · Chemical Communications · doi:10.1039/b511984g · Cited by 25 · see citing works

Synthesis of Janus type nucleoside analogues and their preliminary bioactivity

Yang, H.-Z., Pan, M.-Y., Jiang, D., & He, Y. (2010) · Organic & Biomolecular Chemistry · doi:10.1039/c0ob00495b · Cited by 24 · see citing works

Complexes of Poly(adenylic Acid) with Complementary Monomers

Davies, R. J. H. (1976) · European Journal of Biochemistry · doi:10.1111/j.1432-1033.1976.tb10015.x · Cited by 14 · see citing works

Base‐Pairing Behavior of a Carbocyclic Janus‐AT Nucleoside Analogue Capable of Recognizing A and T within a DNA Duplex

Largy, E., Liu, W., Hasan, A., & Perrin, D. M. (2013) · ChemBioChem · doi:10.1002/cbic.201300250 · Cited by 14 · see citing works

DNA nanotechnology

Seeman, N. C., & Sleiman, H. F. (2017) · Nature Reviews Materials · doi:10.1038/natrevmats.2017.68 · Cited by 1,875 · see citing works

Photoresponsive Supramolecular Polymers: From Light‐Controlled Small Molecules to Smart Materials

Xu, F., & Feringa, B. L. (2022) · Advanced Materials · doi:10.1002/adma.202204413 · Cited by 325 · see citing works

Single-stranded DNA and RNA origami

Han, D., Qi, X., Myhrvold, C., Wang, B., Dai, M., Jiang, S., Bates, M., Liu, Y., An, B., Zhang, F., et al. (2017) · Science · doi:10.1126/science.aao2648 · Cited by 300 · see citing works

Emerging Approaches to DNA Data Storage: Challenges and Prospects

Doricchi, A., Platnich, C. M., Gimpel, A., Horn, F., Earle, M., Lanzavecchia, G., Cortajarena, A. L., Liz-Marzán, L. M., Liu, N., Heckel, R., et al. (2022) · ACS Nano · doi:10.1021/acsnano.2c06748 · Cited by 235 · see citing works

DNA Nanostructures at the Interface with Biology

Bujold, K. E., Lacroix, A., & Sleiman, H. F. (2018) · Chem · doi:10.1016/j.chempr.2018.02.005 · Cited by 231 · see citing works

Bioinspired Adhesive Hydrogel Driven by Adenine and Thymine

Liu, X., Zhang, Q., Gao, Z., Hou, R., & Gao, G. (2017) · ACS Applied Materials & Interfaces · doi:10.1021/acsami.7b04832 · Cited by 212 · see citing works

Supramolecular peptide constructed by molecular Lego allowing programmable self-assembly for photodynamic therapy

Zhu, H., Wang, H., Shi, B., Shangguan, L., Tong, W., Yu, G., Mao, Z., & Huang, F. (2019) · Nature Communications · doi:10.1038/s41467-019-10385-9 · Cited by 202 · see citing works

Bioinspired Adhesive Hydrogels Tackified by Nucleobases

Liu, X., Zhang, Q., & Gao, G. (2017) · Advanced Functional Materials · doi:10.1002/adfm.201703132 · Cited by 195 · see citing works

Reversible Assembly of Graphitic Carbon Nitride 3D Network for Highly Selective Dyes Absorption and Regeneration

Zhang, Y., Zhou, Z., Shen, Y., Zhou, Q. X., Wang, J., Liu, A., Liu, S., & Zhang, Y. (2016) · ACS Nano · doi:10.1021/acsnano.6b05488 · Cited by 194 · see citing works

Architectonics: Design of Molecular Architecture for Functional Applications

Avinash, M. B., & Govindaraju, T. (2018) · Accounts of Chemical Research · doi:10.1021/acs.accounts.7b00434 · Cited by 129 · see citing works

A dissipative pathway for the structural evolution of DNA fibres

Rizzuto, F. J., Platnich, C. M., Luo, X., Shen, Y., Dore, M. D., Lachance-Brais, C., Guarné, A., Cosa, G., & Sleiman, H. F. (2021) · Nature Chemistry · doi:10.1038/s41557-021-00751-w · Cited by 120 · see citing works

Tough Adhesion of Nucleobase‐Tackifed Gels in Diverse Solvents

Liu, X., Zhang, Q., Duan, L., & Gao, G. (2019) · Advanced Functional Materials · doi:10.1002/adfm.201900450 · Cited by 119 · see citing works

Hydrogen-bonded rosettes comprising π-conjugated systems as building blocks for functional one-dimensional assemblies

Adhikari, B., Xu, L. S., Yamauchi, M., Ouchi, H., Aratsu, K., & Yagai, S. (2017) · Chemical Communications · doi:10.1039/c7cc04172a · Cited by 108 · see citing works

A poly(thymine)–melamine duplex for the assembly of DNA nanomaterials

Li, Q., Zhao, J., Liu, L., Jonchhe, S., Rizzuto, F. J., Mandal, S., He, H., Wei, S., Sleiman, H. F., Mao, H., et al. (2020) · Nature Materials · doi:10.1038/s41563-020-0728-2 · Cited by 101 · see citing works

Hierarchical Hydrogen Bonds Endow Supramolecular Polymers with High Strength, Toughness, and Self‐Healing Properties

Wu, J., Zeng, F., Fan, Z., Xuan, S., Hua, Z., & Liu, G. (2024) · Advanced Functional Materials · doi:10.1002/adfm.202410518 · Cited by 91 · see citing works

Orthogonal regulation of DNA nanostructure self-assembly and disassembly using antibodies

Ranallo, S., Sorrentino, D., & Ricci, F. (2019) · Nature Communications · doi:10.1038/s41467-019-13104-6 · Cited by 89 · see citing works

Self-Assembly of Metallacages into Multidimensional Suprastructures with Tunable Emissions

Sun, Y., Yao, Y. S., Wang, H., Fu, W., Chen, C., Saha, M. L., Zhang, M., Datta, S., Zhou, Z., Yu, H., et al. (2018) · Journal of the American Chemical Society · doi:10.1021/jacs.8b05809 · Cited by 78 · see citing works

Advances in intracellular delivery through supramolecular self-assembly of oligonucleotides and peptides

Kim, J., Ashwanikumar, N., Patel, S., & Sahay, G. (2019) · Theranostics · doi:10.7150/thno.33921 · Cited by 78 · see citing works

Freezing‐directed Stretching and Alignment of DNA Oligonucleotides

Liu, B., Wu, T., Huang, Z., Liu, Y., & Liu, J. (2018) · Angewandte Chemie International Edition · doi:10.1002/anie.201814352 · Cited by 75 · see citing works

Bioinspired Supramolecular Hydrogel from Design to Applications

Gao, F., Yang, X., & Song, W. (2023) · Small Methods · doi:10.1002/smtd.202300753 · Cited by 66 · see citing works

Self-Assembled Nanomaterials for Enhanced Phototherapy of Cancer

Zhao, L., Xing, Y., Wang, R., Yu, F., & Yu, F. (2019) · ACS Applied Bio Materials · doi:10.1021/acsabm.9b00843 · Cited by 64 · see citing works

Reconfigurable A-motif, i-motif and triplex nucleic acids for smart pH-responsive DNA hydrogels

Hu, Y., & Ying, J. Y. (2022) · Materials Today · doi:10.1016/j.mattod.2022.12.003 · Cited by 63 · see citing works

Heating Drives DNA to Hydrophobic Regions While Freezing Drives DNA to Hydrophilic Regions of Graphene Oxide for Highly Robust Biosensors

Liu, B., Zhao, Y. R., Jia, Y., & Liu, J. (2020) · Journal of the American Chemical Society · doi:10.1021/jacs.0c07028 · Cited by 59 · see citing works

Small Molecule‐Templated DNA Hydrogel with Record Stiffness Integrates and Releases DNA Nanostructures and Gene Silencing Nucleic Acids

Lachance‐Brais, C., Rammal, M., Asohan, J., Katolik, A., Luo, X., Saliba, D., Jonderian, A., Damha, M. J., Harrington, M. J., & Sleiman, H. F. (2023) · Advanced Science · doi:10.1002/advs.202205713 · Cited by 55 · see citing works

Flash Synthesis of DNA Hydrogel via Supramacromolecular Assembly of DNA Chains and Upconversion Nanoparticles for Cell Engineering

Tang, J., Ou, J., Zhu, C., Yao, C., & Yang, D. (2021) · Advanced Functional Materials · doi:10.1002/adfm.202107267 · Cited by 54 · see citing works

Supramolecular self-assembly of triazine-based small molecules: targeting the endoplasmic reticulum in cancer cells

Ghosh, C., Nandi, A., & Basu, S. (2019) · Nanoscale · doi:10.1039/c8nr08682f · Cited by 50 · see citing works

DNA‐Based Dissipative Assembly toward Nanoarchitectonics

Liu, Q., Li, H., Yu, B., Meng, Z., Zhang, X., Li, J., & Zheng, L. (2022) · Advanced Functional Materials · doi:10.1002/adfm.202201196 · Cited by 50 · see citing works

Molecular and supramolecular chemistry of rosette nanotubes

Beingessner, R. L., Fan, Y., & Fenniri, H. (2016) · RSC Advances · doi:10.1039/c6ra16315g · Cited by 49 · see citing works

Cyanuric Acid‐Based Organocatalyst for Utilization of Carbon Dioxide at Atmospheric Pressure

Yu, B., Kim, D., Kim, S., & Hong, S. H. (2016) · ChemSusChem · doi:10.1002/cssc.201601684 · Cited by 47 · see citing works

Molecular self‐assembly using peptide nucleic acids

Berger, O., & Gazit, E. (2016) · Biopolymers · doi:10.1002/bip.22930 · Cited by 45 · see citing works

Assembly of Metallacages into Soft Suprastructures with Dimensions of up to Micrometers and the Formation of Composite Materials

Sun, Y., Zhang, F., Jiang, S., Wang, Z., Ni, R., Wang, H., Zhou, W., Li, X., & Stang, P. J. (2018) · Journal of the American Chemical Society · doi:10.1021/jacs.8b11199 · Cited by 43 · see citing works

Hydrazide–Hydrazone Small Molecules as AIEgens: Illuminating Mitochondria in Cancer Cells

Patil, S., Pandey, S., Singh, A., Radhakrishna, M., & Basu, S. (2019) · Chemistry - A European Journal · doi:10.1002/chem.201901074 · Cited by 42 · see citing works

Modular self-assembly of gamma-modified peptide nucleic acids in organic solvent mixtures

Kumar, S., Pearse, A., Liu, Y., & Taylor, R. E. (2020) · Nature Communications · doi:10.1038/s41467-020-16759-8 · Cited by 27 · see citing works

Formation of supramolecular assemblies and liquid crystals by purine nucleobases and cyanuric acid in water: implications for the possible origins of RNA

Li, C., Cafferty, B. J., Karunakaran, S. C., Schuster, G. B., & Hud, N. V. (2016) · Physical Chemistry Chemical Physics · doi:10.1039/c6cp03047e · Cited by 38 · see citing works

Quantified structural speciation in self-sorted CoII6L 4 cage systems

Rizzuto, F. J., Kieffer, M., & Nitschke, J. R. (2018) · Chemical Science · doi:10.1039/c7sc04927g · Cited by 35 · see citing works

Mapping the energy landscapes of supramolecular assembly by thermal hysteresis

Harkness, R. W., V, Avakyan, N., Sleiman, H. F., & Mittermaier, A. (2018) · Nature Communications · doi:10.1038/s41467-018-05502-z · Cited by 35 · see citing works

Supramolecular Depolymerization in the Mixture of Two Poor Solvents: Mechanistic Insights and Modulation of Supramolecular Polymerization of Ionic π‐Systems

Kotha, S., Mabesoone, M. F. J., Srideep, D., Sahu, R., Reddy, S. K., & Rao, K. V. (2020) · Angewandte Chemie International Edition · doi:10.1002/anie.202011977 · Cited by 34 · see citing works

Small Molecule Recognition Triggers Secondary and Tertiary Interactions in DNA Folding and Hammerhead Ribozyme Catalysis

Mao, J., DeSantis, C., & Bong, D. T.-Y. (2017) · Journal of the American Chemical Society · doi:10.1021/jacs.7b05448 · Cited by 32 · see citing works

Molecular architectonics of DNA for functional nanoarchitectures

Ghosh, D., Datta, L. P., & Govindaraju, T. (2020) · Beilstein Journal of Nanotechnology · doi:10.3762/bjnano.11.11 · Cited by 32 · see citing works

DNA-Guided Assemblies toward Nanoelectronic Applications

Vittala, S. K., & Han, D. (2020) · ACS Applied Bio Materials · doi:10.1021/acsabm.9b01178 · Cited by 32 · see citing works

Light‐Activated Assembly of DNA Origami into Dissipative Fibrils

Berg, W. R., Berengut, J. F., Bai, C., Wimberger, L., Lee, L. K., & Rizzuto, F. J. (2023) · Angewandte Chemie International Edition · doi:10.1002/anie.202314458 · Cited by 31 · see citing works

B-DNA model systems in non-terran bio-solvents: implications for structure, stability and replication

Hamlin, T. A., Poater, J., Guerra, C. F., & Bickelhaupt, F. M. (2017) · Physical Chemistry Chemical Physics · doi:10.1039/c7cp01908d · Cited by 30 · see citing works

Small molecule-induced DNA hydrogel with encapsulation and release properties

He, M., Nandu, N., Uyar, T. B., Royzen, M., & Yigit, M. V. (2020) · Chemical Communications · doi:10.1039/d0cc03439h · Cited by 30 · see citing works

A Self-Immolative DNA Nanogel Vaccine toward Cancer Immunotherapy

Hu, Y., Gao, S., Lu, H., Tan, S., Chen, F., Ke, Y., & Ying, J. Y. (2023) · Nano Letters · doi:10.1021/acs.nanolett.3c02449 · Cited by 30 · see citing works

Sequence and Structure Dual-Dependent Interaction between Small Molecules and DNA for the Detection of Residual Silver Ions in As-Prepared Silver Nanomaterials

Wang, Z., Zhao, J., Li, Z., Bao, J., & Dai, Z. H. (2017) · Analytical Chemistry · doi:10.1021/acs.analchem.7b01238 · Cited by 29 · see citing works

Organic Semiconductor–DNA Hybrid Assemblies

Cui, C., Park, D. H., & Ahn, D. J. (2020) · Advanced Materials · doi:10.1002/adma.202002213 · Cited by 29 · see citing works

Stimuli‐Responsive DNA Self‐Assembly: From Principles to Applications

Yu, Y., Jin, B., Li, Y., & Deng, Z. (2019) · Chemistry - A European Journal · doi:10.1002/chem.201900491 · Cited by 28 · see citing works

From Interaction to Function in DNA‐Templated Supramolecular Self‐Assemblies

Surin, M., & Ulrich, S. (2020) · ChemistryOpen · doi:10.1002/open.202000013 · Cited by 27 · see citing works

Exceptional Nuclease Resistance of DNA and RNA with the Addition of Small-Molecule Nucleobase Mimics

Lachance‐Brais, C., Yao, C., Reyes-Valenzuela, A., Asohan, J., Guettler, E. M., & Sleiman, H. F. (2024) · Journal of the American Chemical Society · doi:10.1021/jacs.3c07023 · Cited by 26 · see citing works

Enzyme- and DNAzyme-Driven Transient Assembly of DNA-Based Phase-Separated Coacervate Microdroplets

Qin, Y., Sohn, Y. S., Nechushtai, R., Xia, F., Huang, F., & Willner, I. (2025) · Journal of the American Chemical Society · doi:10.1021/jacs.5c00637 · Cited by 26 · see citing works

Depsipeptide Nucleic Acids: Prebiotic Formation, Oligomerization, and Self-Assembly of a New Proto-Nucleic Acid Candidate

Fialho, D. M., Karunakaran, S. C., Greeson, K. W., Martínez, I., Schuster, G. B., Krishnamurthy, R., & Hud, N. V. (2021) · Journal of the American Chemical Society · doi:10.1021/jacs.1c02287 · Cited by 26 · see citing works

Tuning DNA Supramolecular Polymers by the Addition of Small, Functionalized Nucleobase Mimics

Lachance‐Brais, C., Hennecker, C. D., Alenaizan, A., Luo, X., Toader, V., Taing, M., Sherrill, C. D., Mittermaier, A., & Sleiman, H. F. (2021) · Journal of the American Chemical Society · doi:10.1021/jacs.1c08972 · Cited by 26 · see citing works

Bifacial Nucleobases for Hexaplex Formation in Aqueous Solution

Kashida, H., Hattori, Y., Tazoe, K., Inoue, T., Nishikawa, K., Ishii, K., Uchiyama, S., Yamashita, H., Abe, M., Kamiya, Y., et al. (2018) · Journal of the American Chemical Society · doi:10.1021/jacs.8b02807 · Cited by 25 · see citing works

Differentiating the mechanism of self-assembly in supramolecular polymers through computation

Korlepara, D. B., Henderson, W. R., Castellano, R. K., & Balasubramanian, S. (2019) · Chemical Communications · doi:10.1039/c9cc01058k · Cited by 25 · see citing works

Noncovalent Helicene Structure between Nucleic Acids and Cyanuric Acid

Alenaizan, A., Fauché, K., Krishnamurthy, R., & Sherrill, C. D. (2020) · Chemistry - A European Journal · doi:10.1002/chem.202004390 · Cited by 25 · see citing works

Three-Dimensional Uracil Network with Sodium as a Linker

Giedraityte, Z., Lopez‐Acevedo, O., Espinosa-Leal, L., Pale, V., Sainio, J., Tripathi, T. S., & Karppinen, M. J. (2016) · The Journal of Physical Chemistry C · doi:10.1021/acs.jpcc.6b08986 · Cited by 24 · see citing works

The proto-Nucleic Acid Builder: a software tool for constructing nucleic acid analogs

Alenaizan, A., Barnett, J. L., Hud, N. V., Sherrill, C. D., & Petrov, A. S. (2020) · Nucleic Acids Research · doi:10.1093/nar/gkaa1159 · Cited by 23 · see citing works

The Unexpected Base‐Pairing Behavior of Cyanuric Acid in RNA and Ribose versus Cyanuric Acid Induced Helicene Assembly of Nucleic Acids: Implications for the Pre‐RNA Paradigm

Anderson, B. A., Fauché, K., Karunakaran, S. C., Yerabolu, J. R., Hud, N. V., & Krishnamurthy, R. (2020) · Chemistry - A European Journal · doi:10.1002/chem.202004397 · Cited by 23 · see citing works

Freezing‐directed Stretching and Alignment of DNA Oligonucleotides

Liu, B., Wu, T., Huang, Z., Liu, Y., & Liu, J. (2018) · Angewandte Chemie · doi:10.1002/ange.201814352 · Cited by 22 · see citing works

Addressing the in vivo delivery of nucleic-acid nanostructure therapeutics

Alexander, S., Moghadam, M. G., Rothenbroker, M., & Chou, L. Y. T. (2023) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2023.114898 · Cited by 21 · see citing works

Duplex Stem Replacement with bPNA+ Triplex Hybrid Stems Enables Reporting on Tertiary Interactions of Internal RNA Domains

Miao, S., Liang, Y., Marathe, I. A., Mao, J., DeSantis, C., & Bong, D. T.-Y. (2019) · Journal of the American Chemical Society · doi:10.1021/jacs.9b03435 · Cited by 20 · see citing works

Controlling Dynamic DNA Reactions at the Surface of Single-Walled Carbon Nanotube Electrodes to Design Hybridization Platforms with a Specific Amperometric Readout

Fortunati, S., Vasini, I., Giannetto, M., Mattarozzi, M., Porchetta, A., Bertucci, A., & Careri, M. (2022) · Analytical Chemistry · doi:10.1021/acs.analchem.1c05294 · Cited by 19 · see citing works

Fullerene Cluster Assisted Self‐Assembly of Short DNA Strands into Semiconducting Nanowires

Vittala, S. K., Saraswathi, S. K., & Joseph, J. (2017) · Chemistry - A European Journal · doi:10.1002/chem.201703333 · Cited by 19 · see citing works

Exquisite regulation of supramolecular equilibrium polymers in water: chain stoppers control length, polydispersity and viscoelasticity

Karunakaran, S. C., Cafferty, B. J., Peláez-Fernández, M., Neselu, K., Schmidt‐Krey, I., Fernández‐Nieves, A., Schuster, G. B., & Hud, N. V. (2018) · Polymer Chemistry · doi:10.1039/c8py01146j · Cited by 19 · see citing works

Bringing Prebiotic Nucleosides and Nucleotides Down to Earth

Fiore, M., & Strazewski, P. (2016) · Angewandte Chemie International Edition · doi:10.1002/anie.201606232 · Cited by 18 · see citing works

Oligo‐Adenine Derived Secondary Nucleic Acid Frameworks: From Structural Characteristics to Applications

Hu, Y., & Willner, I. (2024) · Angewandte Chemie International Edition · doi:10.1002/anie.202412106 · Cited by 17 · see citing works

Molecular Architectonics‐guided Design of Biomaterials

Moorthy, H., Datta, L. P., & Govindaraju, T. (2021) · Chemistry - An Asian Journal · doi:10.1002/asia.202001445 · Cited by 17 · see citing works

Supramolecular Depolymerization in the Mixture of Two Poor Solvents: Mechanistic Insights and Modulation of Supramolecular Polymerization of Ionic π‐Systems

Kotha, S., Mabesoone, M. F. J., Dasari, S., Sahu, R., Reddy, S. K., & Rao, K. V. (2020) · Angewandte Chemie · doi:10.1002/ange.202011977 · Cited by 17 · see citing works

A dynamic DNA nanostructure with switchable and size-selective molecular recognition properties

Kim, C., Jeong, E. H., Lee, H., & Park, S. (2019) · Nanoscale · doi:10.1039/c8nr09341e · Cited by 17 · see citing works

Supernatural: Artificial Nucleobases and Backbones to Program Hybridization-Based Assemblies and Circuits.

López-Tena, M., Chen, S.-K., & Winssinger, N. (2022) · Bioconjugate chemistry · doi:10.1021/acs.bioconjchem.2c00292 · Cited by 12 · see citing works

Unnatural bases for recognition of noncoding nucleic acid interfaces

Miao, S., Liang, Y., Rundell, S. R., Bhunia, D., Devari, S., Munyaradzi, O., & Bong, D. T.-Y. (2020) · Biopolymers · doi:10.1002/bip.23399 · Cited by 14 · see citing works

Bifacial PNAs Destabilize MALAT1 by 3′ A-Tail Displacement from the U-Rich Internal Loop

Miao, S., Bhunia, D., Devari, S., Liang, Y., Munyaradzi, O., Rundell, S. R., & Bong, D. T.-Y. (2021) · ACS Chemical Biology · doi:10.1021/acschembio.1c00575 · Cited by 15 · see citing works

Target-Responsive DNA Hydrogels with Encapsulation and Release Properties Using Programmable CRISPR-Cas12a

Tharu, R. J., Hanson, E., & Yigit, M. V. (2025) · ACS Chemical Biology · doi:10.1021/acschembio.5c00355 · Cited by 14 · see citing works

Assembly of Rolling Circle Amplification‐Produced Ultralong Single‐Stranded DNA to Construct Biofunctional DNA Materials

Tang, J., Liang, A., Yao, C., & Yang, D. (2022) · Chemistry - A European Journal · doi:10.1002/chem.202202673 · Cited by 14 · see citing works

Nanosheets and 2D-nanonetworks by mutually assisted self-assembly of fullerene clusters and DNA three-way junctions

Vittala, S. K., Saraswathi, S. K., Ramesan, A. B., & Joseph, J. (2019) · Nanoscale Advances · doi:10.1039/c9na00485h · Cited by 14 · see citing works

Chain Entropy Beats Hydrogen Bonds to Unfold and Thread Dialcohol Phosphates inside Cyanostar Macrocycles To Form [3]Pseudorotaxanes

Fadler, R. E., Ouahabi, A. A., Qiao, B., Carta, V., König, N. F., Gao, X., Zhao, W., Zhang, Y., Lutz, J., & Flood, A. H. (2021) · The Journal of Organic Chemistry · doi:10.1021/acs.joc.0c02887 · Cited by 14 · see citing works

Electrostatically Directed Long‐Range Self‐Assembly of Nucleotides with Cationic Nanoparticles To Form Multifunctional Bioplasmonic Networks

Roy, S., Adury, V. S. S., Rao, A., Roy, S., Mukherjee, A., & Pillai, P. P. (2022) · Angewandte Chemie International Edition · doi:10.1002/anie.202203924 · Cited by 13 · see citing works

Prebiotic synthesis of noncanonical nucleobases under plausible alkaline hydrothermal conditions

Pérez-Fernández, C., Vega, J., Rayo-Pizarroso, P., Mateo‐Martí, E., & Ruiz‐Bermejo, M. (2022) · Scientific Reports · doi:10.1038/s41598-022-19474-0 · Cited by 13 · see citing works

Self-assembled methodologies for the construction of DNA nanostructures and biological applications

Ye, R., Wang, Y., Liu, Y., Cai, P., & Song, J. (2024) · Biomaterials Science · doi:10.1039/d4bm00584h · Cited by 13 · see citing works

Probing the self-assembly process of amphiphilic tetrahedral DNA frameworks

Liang, C., Chen, J., Li, M., Ge, Z., Fan, C., & Shen, J. (2022) · Chemical Communications · doi:10.1039/d2cc03451d · Cited by 13 · see citing works

Probing Conformational Polymorphism of DNA Assemblies with Nanopores

Sheng, Y., Zhou, K., Liu, Q., Liu, L., & Wu, H. (2020) · Analytical Chemistry · doi:10.1021/acs.analchem.9b05650 · Cited by 13 · see citing works

Oligo-Adenine and Cyanuric Acid Supramolecular DNA-Based Hydrogels Exhibiting Acid-Resistance and Physiological pH-Responsiveness

Hu, Y., Liu, J., Ke, Y., Wang, B., Lim, J. Y. C., Dong, Z., Long, Y., & Willner, I. (2024) · ACS Applied Materials & Interfaces · doi:10.1021/acsami.4c03834 · Cited by 12 · see citing works

Recent advances in the construction strategy, functional properties, and biosensing application of self-assembled triangular unit-based DNA nanostructures

Duan, M., Chang, Y., Chen, X., Wang, Z., Wu, S., & Duan, N. (2024) · Biotechnology Advances · doi:10.1016/j.biotechadv.2024.108436 · Cited by 12 · see citing works

Biomimetic Hydrogen‐Bonded Base Pairing of Nucleoside Triphosphates in Water by a Tetraphenylethene‐Based Octaimidazolium Cage

Li, Y., Cheng, L., Wang, P., Kang, X., Li, Q., & Cao, L. (2025) · Angewandte Chemie International Edition · doi:10.1002/anie.202505732 · Cited by 12 · see citing works

AMP Aptamer Programs DNA Tile Cohesion without Canonical Base Pairing

Zhang, Z., Jin, J., Paluzzi, V. E., Jin, Z., Wen, Y., Huang, C. Z., Li, C. M., Mao, C., & Zuo, H. (2023) · Journal of the American Chemical Society · doi:10.1021/jacs.3c06260 · Cited by 11 · see citing works

Melamine driven supramolecular self‐assembly of nucleobase derivatives in water

Xiao, Y., Zhang, J., & Lang, M. (2018) · Journal of Polymer Science Part A Polymer Chemistry · doi:10.1002/pola.28954 · Cited by 11 · see citing works

Insights into the self-assembly steps of cyanuric acid toward rosette motifs: a DFT study

Petelski, A. N., Peruchena, N. M., Pamies, S. C., & Sosa, G. L. (2017) · Journal of Molecular Modeling · doi:10.1007/s00894-017-3428-3 · Cited by 10 · see citing works

Self-assembly of DNA Nanostructures via Bioinspired Metal Ion Coordination

Wang, C., Di, Z., Fan, Z., & Li, L. (2019) · Chemical Research in Chinese Universities · doi:10.1007/s40242-019-0028-z · Cited by 10 · see citing works

Spatiotemporal dynamic and catalytically mediated reconfiguration of compartmentalized cyanuric acid/polyadenine DNA microdroplet condensates

Xu, S., Ouyang, Y., Qin, Y., Chen, D., Duan, Z., Song, D., Harries, D., Xia, F., Willner, I., & Huang, F. (2025) · Nature Communications · doi:10.1038/s41467-025-58650-4 · Cited by 9 · see citing works

Revealing the Hydrogen Bonding Interaction of DNA with Unnatural Bases via Plasmonic Antenna Enhanced Infrared Spectroscopy

Li, J. P., Li, J., Yan, Z., Ding, X., & Xia, X. (2021) · The Journal of Physical Chemistry Letters · doi:10.1021/acs.jpclett.1c02901 · Cited by 9 · see citing works

The cardioprotective effect of dexrazoxane (Cardioxane) is consistent with sequestration of poly(ADP-ribose) by self-assembly and not depletion of topoisomerase 2B

McCormack, K. (2018) · ecancermedicalscience · doi:10.3332/ecancer.2018.889 · Cited by 9 · see citing works

Introducing Bacteria and Synthetic Biomolecules along Engineered DNA Fibers

Burns, J. R. (2021) · Small · doi:10.1002/smll.202100136 · Cited by 9 · see citing works

A Dual‐Action Nucleoside‐Based Supramolecular Hydrogel Combats Periodontitis by Disrupting the Bacteria‐Osteoclast Cascade

Wang, Q., Zhao, Y., Han, L., Li, C., Wang, Z., Zhang, X., Liu, T., Wang, K., Han, X., Xie, L., et al. (2025) · Advanced Materials · doi:10.1002/adma.202516181 · Cited by 8 · see citing works

Thymine-Induced Dynamic Switching of Self-Assembled Nanofibers in Diaminotriazine-Functionalized Tetraphenylethylene Derivatives: Implications for One-Dimensional Molecular Devices

Saraswathi, S. K., & Joseph, J. (2022) · ACS Applied Nano Materials · doi:10.1021/acsanm.2c00310 · Cited by 8 · see citing works

Target-switched triplex nanotweezer and synergic fluorophore translocation for highly selective melamine assay

Mao, T., Gao, L., Tong, X., Zhou, Y., Li, Q., Fei, Y., Yu, Y., Ye, T., Zhou, X., & Shao, Y. (2018) · Microchimica Acta · doi:10.1007/s00604-018-3134-6 · Cited by 8 · see citing works

Supramolecular assembly-enabled homochiral polymerization of short (dA) n oligonucleotides

Mangalath, S., Karunakaran, S. C., Newnam, G. P., Schuster, G. B., & Hud, N. V. (2021) · Chemical Communications · doi:10.1039/d1cc05420a · Cited by 8 · see citing works

Poly(propylene fumarate)-Based Adhesives with a Transformable Adhesion Force for Suture-Free Fixation of Soft Tissue Wounds

Guan, X., Wei, T., Cai, J., Sun, J., Yu, S., & Guo, D. (2022) · ACS Applied Polymer Materials · doi:10.1021/acsapm.1c01733 · Cited by 8 · see citing works

Structural and Thermodynamic Control of Supramolecular Polymers and DNA Assemblies with Cyanuric Acid: Influence of Substituents and Intermolecular Interactions

Schuster, G. B., Hud, N. V., & Alenaizan, A. (2022) · The Journal of Physical Chemistry B · doi:10.1021/acs.jpcb.2c05934 · Cited by 8 · see citing works

Dynamic behavior of the single-strand DNA molecules from the hydrophilic to hydrophobic regions on graphene oxide surface driven by heating

Wu, M., Huang, Y., Yang, L., Song, Y., & Lei, X. (2023) · Physical Chemistry Chemical Physics · doi:10.1039/d3cp00911d · Cited by 8 · see citing works

SERS Investigation on Oligopeptides Used as Biomimetic Coatings for Medical Devices

Foggia, M. D., Tugnoli, V., Ottani, S., Dettin, M., Zamuner, A., Sánchez‐Cortés, S., Cesini, D., & Torreggiani, A. (2021) · Biomolecules · doi:10.3390/biom11070959 · Cited by 8 · see citing works

Tuning DNA Supramolecular Polymers by the Addition of Small, Functionalized Nucleobase Mimics

Lachance‐Brais, C., Hennecker, C. D., Alenaizan, A., Luo, X., Toader, V., Taing, M., Sherrill, C. D., Mittermaier, A., & Sleiman, H. F. (2021) · Journal of the American Chemical Society · doi:10.1021/jacs.1c08972 · Cited by 26 · see citing works

Nucleic acid / small-molecule hybrids and their use in supramolecular functionalization, DNA hydrogels, gene silencing and sequence protection

Lachance-Brais, C. (2023) · doi:10.82308/47347

Fabricating functionalized fibres

Whitfield, C. J. (2021) · Nature Reviews Chemistry · doi:10.1038/s41570-021-00357-3 · Cited by 1 · see citing works

Beyond Symmetric Motifs: Asymmetric Small-Molecule Recognition Directs a New Poly(adenine) Assembly

Bennett, J., Lachance‐Brais, C., Almutairi, S., Alenaizan, A., Laurent, Q., Saliba, D., & Sleiman, H. F. (2026) · Journal of the American Chemical Society · doi:10.1021/jacs.6c09329

The Unexpected Base‐Pairing Behavior of Cyanuric Acid in RNA and Ribose versus Cyanuric Acid Induced Helicene Assembly of Nucleic Acids: Implications for the Pre‐RNA Paradigm

Anderson, B. A., Fauché, K., Karunakaran, S. C., Yerabolu, J. R., Hud, N. V., & Krishnamurthy, R. (2020) · Chemistry - A European Journal · doi:10.1002/chem.202004397 · Cited by 23 · see citing works