Femtosecond X-ray-induced explosion of C60 at extreme intensity
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Understanding molecular femtosecond dynamics under intense X-ray exposure is critical to progress in biomolecular imaging and matter under extreme conditions. Imaging viruses and proteins at an atomic spatial scale and on the time scale of atomic motion requires rigorous, quantitative understanding of dynamical effects of intense X-ray exposure. Here we present an experimental and theoretical study of C60 molecules interacting with intense X-ray pulses from a free-electron laser, revealing the influence of processes not previously reported. Our work illustrates the successful use of classical mechanics to describe all moving particles in C60, an approach that scales well to larger systems, for example, biomolecules. Comparisons of the model with experimental data on C60 ion fragmentation show excellent agreement under a variety of laser conditions. The results indicate that this modelling is applicable for X-ray interactions with any extended system, even at higher X-ray dose rates expected with future light sources.
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An experimentally tested approach to addressing these challenges is the model implemented in XMDYN [112,113].
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From Roadmap of ultrafast x-ray atomic and molecular physics (2018) · cites this paper as [113]
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Cites
Brenner, D. W. (1990) · Physical review. B, Condensed matter · doi:10.1103/physrevb.42.9458 · Cited by 4,047 · see citing works
Femtosecond X-ray protein nanocrystallography
Chapman, H. N., Fromme, P., Barty, A., White, T. A., Kirian, R. A., Aquila, A., Hunter, M. S., Schulz, J., DePonte, D. P., Weierstall, U., et al. (2011) · Nature · doi:10.1038/nature09750 · Cited by 2,076 · see citing works
Self-citationPotential for biomolecular imaging with femtosecond X-ray pulses
Neutze, R., Wouts, R., van der Spoel, D., Weckert, E., & Hajdu, J. (2000) · Nature · doi:10.1038/35021099 · Cited by 2,022 · see citing works
High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography
Boutet, S., Lomb, L., Williams, G. J., Barends, T. R. M., Aquila, A., Doak, R. B., Weierstall, U., DePonte, D. P., Steinbrener, J., Shoeman, R. L., et al. (2012) · Science · doi:10.1126/science.1217737 · Cited by 847 · see citing works
Femtosecond electronic response of atoms to ultra-intense X-rays
Young, L., Kanter, E. P., Krässig, B., Li, Y., March, A. M., Pratt, S. T., Santra, R., Southworth, S. H., Rohringer, N., DiMauro, L. F., et al. (2010) · Nature · doi:10.1038/nature09177 · Cited by 792 · see citing works
Self-citationCreation and diagnosis of a solid-density plasma with an X-ray free-electron laser
Vinko, S. M., Ciricosta, O., Cho, B. I., Engelhorn, K., Chung, H.-K., Brown, C. R. D., Burian, T., Chalupský, J., Falcone, R. W., Graves, C. E., et al. (2012) · Nature · doi:10.1038/nature10746 · Cited by 483 · see citing works
Redecke, L., Nass, K., DePonte, D. P., White, T. A., Rehders, D., Barty, A., Stellato, F., Liang, M., Barends, T. R. M., Boutet, S., et al. (2013) · Science · doi:10.1126/science.1229663 · Cited by 440 · see citing works
Radiation damage in macromolecular crystallography: what is it and why should we care?
Garman, E. F. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444910008656 · Cited by 368 · see citing works
Self-terminating diffraction gates femtosecond X-ray nanocrystallography measurements
Barty, A., Caleman, C., Aquila, A., Tı̂mneanu, N., Lomb, L., White, T. A., Andreasson, J., Arnlund, D., Bajt, S., Barends, T. R. M., et al. (2011) · Nature Photonics · doi:10.1038/nphoton.2011.297 · Cited by 338 · see citing works
Self-citationDirect Measurements of the Ionization Potential Depression in a Dense Plasma
Ciricosta, O., Vinko, S. M., Chung, H. K., Cho, B. I., Brown, C. R. D., Burian, T., Chalupský, J., Engelhorn, K., Falcone, R. W., Graves, C. E., et al. (2012) · Physical Review Letters · doi:10.1103/physrevlett.109.065002 · Cited by 324 · see citing works
Turning solid aluminium transparent by intense soft X-ray photoionization
Nagler, B. (2009) · Nature Physics · doi:10.1038/nphys1341 · Cited by 268 · see citing works
Focusing of X-ray free-electron laser pulses with reflective optics
Yumoto, H., Mimura, H., Koyama, T., Matsuyama, S., Tono, K., Togashi, T., Inubushi, Y., Sato, T., Tanaka, T., Kimura, T., et al. (2012) · Nature Photonics · doi:10.1038/nphoton.2012.306 · Cited by 267 · see citing works
Ultra-efficient ionization of heavy atoms by intense X-ray free-electron laser pulses
Rudek, B., Son, S.-K., Foucar, L., Epp, S. W., Erk, B., Hartmann, R., Adolph, M., Andritschke, R., Aquila, A., Berrah, N., et al. (2012) · Nature Photonics · doi:10.1038/nphoton.2012.261 · Cited by 261 · see citing works
Self-citationUltrafast single-shot diffraction imaging of nanoscale dynamics
Barty, A., Boutet, S., Bogan, M. J., et al. (2008) · Nature Photonics · doi:10.1038/nphoton.2008.128 · Cited by 249 · see citing works
Dynamics of biological molecules irradiated by short x-ray pulses
Hau‐Riege, S. P., London, R. A., & Szöke, A. (2004) · Physical Review E · doi:10.1103/physreve.69.051906 · Cited by 217 · see citing works
Cretin—a radiative transfer capability for laboratory plasmas
Scott, H. A. (2001) · Journal of Quantitative Spectroscopy and Radiative Transfer · doi:10.1016/s0022-4073(01)00109-1 · Cited by 214 · see citing works
Impact of hollow-atom formation on coherent x-ray scattering at high intensity
Son, S.-K., Young, L., & Santra, R. (2011) · Physical Review A · doi:10.1103/physreva.83.033402 · Cited by 209 · see citing works
Self-citationUltraintense X-Ray Induced Ionization, Dissociation, and Frustrated Absorption in Molecular Nitrogen
Hoener, M., Fang, L., Kornilov, O., Geßner, O., Pratt, S. T., Gühr, M., Kanter, E. P., Blaga, C. I., Bostedt, C., Bozek, J. D., et al. (2010) · Physical Review Letters · doi:10.1103/physrevlett.104.253002 · Cited by 208 · see citing works
Self-citationThe Coherent X-ray Imaging (CXI) instrument at the Linac Coherent Light Source (LCLS)
Boutet, S., & Williams, G. J. (2010) · New Journal of Physics · doi:10.1088/1367-2630/12/3/035024 · Cited by 191 · see citing works
Double-core-hole spectroscopy for chemical analysis with an intense X-ray femtosecond laser
Berrah, N., Fang, L., Murphy, B. F., Osipov, T., Ueda, K., Kukk, E., Feifel, R., van der Meulen, P., Salén, P., Schmidt, H. T., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1111380108 · Cited by 185 · see citing works
Self-citationErk, B., Rolles, D., Foucar, L., Rudek, B., Epp, S. W., Cryle, M. J., Bostedt, C., Schorb, S., Bozek, J. D., Rouzée, A., et al. (2013) · Physical Review Letters · doi:10.1103/physrevlett.110.053003 · Cited by 183 · see citing works
Self-citationBostedt, C., Bozek, J. D., Bucksbaum, P. H., Coffee, R., Hastings, J. B., Huang, Z., Lee, R. W., Schorb, S., Corlett, J. N., Denes, P., et al. (2013) · Journal of Physics B Atomic Molecular and Optical Physics · doi:10.1088/0953-4075/46/16/164003 · Cited by 178 · see citing works
Self-citationDouble Core-Hole Production in N2 : Beating the Auger Clock
Fang, L., Hoener, M., Geßner, O., Tarantelli, F., Pratt, S. T., Kornilov, O., Buth, C., Gühr, M., Kanter, E. P., Bostedt, C., et al. (2010) · Physical Review Letters · doi:10.1103/physrevlett.105.083005 · Cited by 178 · see citing works
Self-citationAuger Electron Angular Distribution of Double Core-Hole States in the Molecular Reference Frame
Cryan, J. P., Glownia, J. M., Andreasson, J., Belkacem, A., Berrah, N., Blaga, C. I., Bostedt, C., Bozek, J., Buth, C., DiMauro, L. F., et al. (2010) · Physical Review Letters · doi:10.1103/physrevlett.105.083004 · Cited by 177 · see citing works
Self-citationDeep Inner-Shell Multiphoton Ionization by Intense X-Ray Free-Electron Laser Pulses
Fukuzawa, H., Son, S.-K., Motomura, K., Mondal, S., Nagaya, K., Wada, S., Liu, X.-J., Feifel, R., Tachibana, T., Ito, Y., et al. (2013) · Physical Review Letters · doi:10.1103/physrevlett.110.173005 · Cited by 157 · see citing works
Self-citationDynamics in a cluster under the influence of intense femtosecond hard X-ray pulses
Jurek, Z., Faigel, G., & Tegze, M. (2004) · The European Physical Journal D · doi:10.1140/epjd/e2004-00033-3 · Cited by 134 · see citing works
Self-citationAMO instrumentation for the LCLS X-ray FEL
Bozek, J. D. (2009) · The European Physical Journal Special Topics · doi:10.1140/epjst/e2009-00982-y · Cited by 129 · see citing works
Self-citationSalén, P., van der Meulen, P., Schmidt, H. T., Thomas, R., Larsson, M., Feifel, R., Piancastelli, M. N., Fang, L., Murphy, B. F., Osipov, T., et al. (2012) · Physical Review Letters · doi:10.1103/physrevlett.108.153003 · Cited by 118 · see citing works
Self-citationDynamics of Hollow Atom Formation in Intense X-Ray Pulses Probed by Partial Covariance Mapping
Frasinski, L. J., Zhaunerchyk, V., Mucke, M., Squibb, R. J., Siano, M., Eland, J. H. D., Linusson, P., van der Meulen, P., Salén, P., Thomas, R., et al. (2013) · Physical Review Letters · doi:10.1103/physrevlett.111.073002 · Cited by 104 · see citing works
Self-citationModel for the dynamics of a water cluster in an x-ray free electron laser beam
Bergh, M., Tı̂mneanu, N., & van der Spoel, D. (2004) · Physical Review E · doi:10.1103/physreve.70.051904 · Cited by 80 · see citing works
Thomas, H., Helal, A., Hoffmann, K., Kandadai, N., Keto, J., Andreasson, J., Iwan, B., Seibert, M., Timneanu, N., Hajdu, J., et al. (2012) · Physical Review Letters · doi:10.1103/physrevlett.108.133401 · Cited by 79 · see citing works
Self-citationOn the Feasibility of Nanocrystal Imaging Using Intense and Ultrashort X-ray Pulses
Caleman, C., Huldt, G., Maia, F. R. N. C., Ortiz, C., Parak, F., Hajdu, J., van der Spoel, D., Chapman, H. N., & Tı̂mneanu, N. (2010) · ACS Nano · doi:10.1021/nn1020693 · Cited by 71 · see citing works
Schorb, S., Rupp, D., Swiggers, M., Coffee, R., Messerschmidt, M. M., Williams, G. J., Bozek, J. D., Wada, S., Kornilov, O., Möller, T. B., et al. (2012) · Physical Review Letters · doi:10.1103/physrevlett.108.233401 · Cited by 66 · see citing works
Self-citationDouble Core-Hole Creation by Sequential Attosecond Photoionization
Tamasaku, K., Nagasono, M., Iwayama, H., Shigemasa, E., Inubushi, Y., Tanaka, T., Tono, K., Togashi, T., Sato, T., Katayama, T., et al. (2013) · Physical Review Letters · doi:10.1103/physrevlett.111.043001 · Cited by 64 · see citing works
Modelling dynamics of samples exposed to free-electron-laser radiation with Boltzmann equations
Ziaja, B., Castro, A., Weckert, E., & Möller, T. B. (2006) · The European Physical Journal D · doi:10.1140/epjd/e2006-00240-x · Cited by 63 · see citing works
Gnodtke, C., Saalmann, U., & Rost, J. M. (2009) · Physical Review A · doi:10.1103/physreva.79.041201 · Cited by 60 · see citing works
Imaging atom clusters by hard X-ray free-electron lasers
Jurek, Z., Oszlányi, G., & Faigel, G. (2004) · Europhysics Letters (EPL) · doi:10.1209/epl/i2003-10119-x · Cited by 57 · see citing works
Self-citationFang, L., Osipov, T., Murphy, B. F., Tarantelli, F., Kukk, E., Cryan, J. P., Glownia, M., Bucksbaum, P. H., Coffee, R., Chen, M., et al. (2012) · Physical Review Letters · doi:10.1103/physrevlett.109.263001 · Cited by 50 · see citing works
Self-citationSimulations of radiation damage in biomolecular nanocrystals induced by femtosecond X-ray pulses
Caleman, C., Bergh, M., Scott, H. A., Spence, J. C. H., Chapman, H. N., & Tı̂mneanu, N. (2011) · Journal of Modern Optics · doi:10.1080/09500340.2011.597519 · Cited by 47 · see citing works
Photoelectron Dynamics in X-Ray Free-Electron-Laser Diffractive Imaging of Biological Samples
Hau‐Riege, S. P. (2012) · Physical Review Letters · doi:10.1103/physrevlett.108.238101 · Cited by 34 · see citing works
Photofragmentation of C60 Molecules following Resonance Excitation and Ionization near the C 1s Edge
Aksela, S., Nõmmiste, E., Jauhiainen, J., et al. (1995) · Physical Review Letters · doi:10.1103/physrevlett.75.2112 · Cited by 32 · see citing works
Constantinescu, R. C., Hunsche, S., van den Heuvell, H. B. V. L., et al. (1998) · Physical Review A · doi:10.1103/physreva.58.4637 · Cited by 22 · see citing works
Berrah, N., & Bucksbaum, P. H. (2013) · Scientific American · doi:10.1038/scientificamerican0114-64 · Cited by 17 · see citing works
Self-citationExplosion of irradiated with a high-intensity femtosecond laser pulse
Hay, N., Springate, E., Mason, M. B., Tisch, J. W. G., Castillejo, M., & Marangos, J. P. (1999) · Journal of Physics B Atomic Molecular and Optical Physics · doi:10.1088/0953-4075/32/2/033 · Cited by 17 · see citing works
The effect of inhomogenities on single-molecule imaging by hard XFEL pulses
Jurek, Z., & Faigel, G. (2009) · Europhysics Letters (EPL) · doi:10.1209/0295-5075/86/68003 · Cited by 17 · see citing works
Self-citationMultiphoton L -shell ionization of H 2 S using intense x-ray pulses from a free-electron laser
Murphy, B. F., Fang, L., Chen, M.-H., Bozek, J. D., Kukk, E., Kanter, E. P., Messerschmidt, M. M., Osipov, T., & Berrah, N. (2012) · Physical Review A · doi:10.1103/physreva.86.053423 · Cited by 17 · see citing works
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Self-citationFemtosecond response of polyatomic molecules to ultra-intense hard X-rays
Rudenko, A., Inhester, L., Hanasaki, K., Li, X., Robatjazi, S. J., Erk, B., Boll, R., Toyota, K., Hao, Y., Vendrell, O., et al. (2017) · Nature · doi:10.1038/nature22373 · Cited by 175 · see citing works
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Self-citationYoon, C. H., Yurkov, M. V., Schneidmiller, E. A., Samoylova, L., Buzmakov, A., Jurek, Z., Ziaja, B., Santra, R., Loh, N. D., Tschentscher, T., et al. (2016) · Scientific Reports · doi:10.1038/srep24791 · Cited by 51 · see citing works
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- Authors
- Murphy, B. F., Osipov, T., Jurek, Z., Fang, L., Son, S.-K., Mucke, M., Eland, J. H. D., Zhaunerchyk, V., Feifel, R., Avaldi, L., Bolognesi, P., Bostedt, C., Bozek, J. D., Grilj, J., Guehr, M., Frasinski, L. J., Glownia, J., Ha, D. T., Hoffmann, K., Kukk, E., McFarland, B. K., Miron, C., Sistrunk, E., Squibb, R. J., Ueda, K., Santra, R., & Berrah, N.
- Affiliations
- Western Michigan University (US)
- Deutsches Elektronen-Synchrotron DESY (DE)
- University of Gothenburg (SE)
- University of Oxford (GB)
- Institute of Inorganic Methodologies and Plasmas (IT)
- SLAC National Accelerator Laboratory (US)
- Imperial College London (GB)
- University of Turku (FI)
- The University of Texas at Austin (US)
- Synchrotron SOLEIL (FR)
- Tohoku University (JP)
- Universität Hamburg (DE)
- University of Connecticut (US)
- Corresponding author
- Berrah, N.
- ORCID
- Venue
- Nature Communications
- Published
- 2014-06-27
- Volume
- 5
- Issue
- 1
- Pages
- 4281-4281
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W1987296779
- Cited by
- 138
- References
- 46
- Citations by year
- 2026: 4 · 2025: 7 · 2024: 4 · 2023: 7 · 2022: 15 · 2021: 10 · 2020: 8 · 2019: 12 · 2018: 11 · 2017: 14 · 2016: 17 · 2015: 23 · 2014: 6
- FWCI
- 9.94
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Nature Communications (publishedVersion)
- PubMed (publishedVersion)
- Uppsala University Publications (Uppsala University) (submittedVersion, other-oa)
- RePEc: Research Papers in Economics (submittedVersion)
- Desy Publications Database (Deutsches Elektronen-Synchrotron DESY) (submittedVersion)
- Spiral (Imperial College London) (submittedVersion, cc-by)
- Funders
- U.S. Department of Energy (DEFG0292ER14299, FG02-92ER14299, DE‐FG02‐)
- Deutsche Forschungsgemeinschaft
- Ministry of Education, Culture, Sports, Science and Technology
- Knut och Alice Wallenbergs Stiftelse
- Vetenskapsrådet
- Hamburg Centre for Ultrafast Imaging
- Office of Science
- Engineering and Physical Sciences Research Council (EP/I032517/1, EP/C530772/2, EP/I032517)
- Basic Energy Sciences (DE-FG02)
- Lawrence Berkeley National Laboratory
- SLAC National Accelerator Laboratory
- Topics
- Physical Sciences › Physics and Astronomy › Atomic and Molecular Physics, and Optics › Laser-Matter Interactions and Applications
- Physical Sciences › Physics and Astronomy › Radiation › Advanced X-ray Imaging Techniques
- Physical Sciences › Physics and Astronomy › Radiation › X-ray Spectroscopy and Fluorescence Analysis
- Keywords
- C60, molecular fragmentation, free-electron laser, femtosecond X-ray pulses, classical molecular dynamics, quantum-classical hybrid models, biomolecular imaging, X-ray dose rate, extreme conditions
- MeSH terms
- Explosions, Lasers, X-Rays, Fullerenes, Molecular Dynamics Simulation
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