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Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication
Abstract
It has been suggested that gene silencing evolved as a defense against genomic parasites such as transposons. This idea is based on analysis of mutations that reactivate transposons that are stably silenced: they affect maintenance rather than initiation of silencing. Here we describe the cloning and characterization of a naturally occurring locus able to heritably silence the otherwise highly active MuDR transposon in maize. This locus, Mu killer (Muk), results from the inverted duplication of a partially deleted autonomous MuDR element located at the breakpoint of a genomic deletion. Muk produces a hybrid hairpin transcript that is processed into small RNAs, which are amplified when the target MuDR transcript is present. Muk provides the first example of a naturally occurring transposon derivative capable of initiating the heritable silencing of an active transposon family. Further, transposon-generated inverted duplications may be important for the generation of double-stranded RNAs used in gene silencing.
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“When Muk is transcribed, it yields a long (>2 kb) dsRNA hairpin structure that is processed to yield siRNAs.”
From A Family of Human MicroRNA Genes from Miniature Inverted-Repeat Transposable Elements (2007) · cites this paper as [19]
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“Muk is an effective silencer of the MuDR DNA-type TE, and the Muk locus consists of an inverted duplication of a partially deleted MuDR element.”
From A Family of Human MicroRNA Genes from Miniature Inverted-Repeat Transposable Elements (2007) · cites this paper as [19]
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Research works printed but not linked: 28
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Self-citationEpigenetic regulation of transposable elements in plants
Lisch, D. (2009) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.59.032607.092744 · Cited by 469
Self-citationA Family of Human MicroRNA Genes from Miniature Inverted-Repeat Transposable Elements
Piriyapongsa, J., & Jordan, I. K. (2007) · PLoS ONE · doi:10.1371/journal.pone.0000203 · Cited by 283
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Metadata
- Authors
- Slotkin, R. K., Freeling, M., & Lisch, D.
- Venue
- Nature Genetics
- Published
- 2005-05-22
- Volume
- 37
- Issue
- 6
- Pages
- 641-644
- ISSN
- 1061-4036
- 1546-1718
- Cited by
- 164
- References
- 0
- Language
- en
- Licence
- www.springer.com/tdm (tdm)
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