SignalP 4.0: discriminating signal peptides from transmembrane regions

Petersen, Thomas Nordahl, Brunak, Søren, von Heijne, Gunnar, Nielsen, Henrik·2011·Nature Methods

Cited by (1,028)

Items 301–400 of 1,028

  1. Whole Genome and Global Gene Expression Analyses of the Model Mushroom Flammulina velutipes Reveal a High Capacity for Lignocellulose Degradation
    Young‐Jin Park, Jeong Hun Baek, Seonwook Lee, Changhoon Kim, Hwanseok Rhee, Hyungtae Kim, Jeong‐Sun Seo, Hae‐Ran Park, Dae-Eun Yoon, Jae-Young Nam et al. · 2014 · PLoS ONE
  2. A Rapid Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry-Based Method for Single-Plasmid Tracking in an Outbreak of Carbapenem-Resistant Enterobacteriaceae
    Anna F. Lau, Honghui Wang, Rebecca A. Weingarten, Steven K. Drake, Anthony F. Suffredini, Mark K. Garfield, Yong Chen, Marjan Guček, Jung-Ho Youn, Frida Stock et al. · 2014 · Journal of Clinical Microbiology
  3. The Evolution of Venom by Co-option of Single-Copy Genes
    Ellen O. Martinson, Mrinalini, Yogeshwar Kelkar, Ching-Ho Chang, John H. Werren · 2017 · Current Biology
  4. APPRIS 2017: principal isoforms for multiple gene sets
    José Manuel Rodrı́guez, Juan Rodriguez-Rivas, Tomás Di Domenico, Jesús Vázquez, Alfonso Valencia, Michael L. Tress · 2017 · Nucleic Acids Research
  5. A fungal avirulence factor encoded in a highly plastic genomic region triggers partial resistance to septoria tritici blotch
    Lukas Meile, Daniel Croll, Patrick C. Brunner, Clémence Plissonneau, Fanny E. Hartmann, Bruce Alan McDonald, Andrea Sánchez‐Vallet · 2018 · New Phytologist
  6. A genetic system for Akkermansia muciniphila reveals a role for mucin foraging in gut colonization and host sterol biosynthesis gene expression
    Lauren E. Davey, Per N. Malkus, Max M. Villa, Lee Dolat, Zachary C. Holmes, Jeffrey Letourneau, Eduard Ansaldo, Lawrence A. David, Gregory M. Barton, Raphael H. Valdivia · 2023 · Nature Microbiology
  7. Contrasting Roles of the Apoplastic Aspartyl Protease APOPLASTIC, ENHANCED DISEASE SUSCEPTIBILITY1-DEPENDENT1 and LEGUME LECTIN-LIKE PROTEIN1 in Arabidopsis Systemic Acquired Resistance ,
    Heiko H. Breitenbach, Marion Wenig, Finni Wittek, Lucía Jordá, Ana María Maldonado-Alconada, Hakan Sarioglu, Thomas Colby, Claudia Knappe, Marlies Bichlmeier, Elisabeth Pabst et al. · 2014 · PLANT PHYSIOLOGY
  8. IGSF10 mutations dysregulate gonadotropin‐releasing hormone neuronal migration resulting in delayed puberty
    Sasha Rose Howard, Leonardo Guasti, Gerard Ruiz‐Babot, Alessandra Mancini, Alessia David, Helen Louise Storr, Louise Metherell, Michael J.E. Sternberg, Claudia Cabrera, Helen R. Warren et al. · 2016 · EMBO Molecular Medicine
  9. Global landscape of cell envelope protein complexes in Escherichia coli
    Mohan Babu, Cedoljub Bundalovic-Torma, Charles Calmettes, Sadhna Phanse, Qingzhou Zhang, Yue Jiang, Zoran Minić, Sun‐Young Kim, Jitender Mehla, Alla G. Gagarinova et al. · 2017 · Nature Biotechnology
  10. EvolutionaryGenomics of Salmonellaenterica Subspecies
    Prerak Desai, Steffen Porwollik, Fred Long, Pui Cheng, Aye Wollam, Sandra W. Clifton, George M. Weinstock, Michael McClelland · 2013 · mBio
  11. Oral transfer of chemical cues, growth proteins and hormones in social insects
    Adria C. LeBoeuf, Patrice Waridel, Colin S. Brent, André N. A. Gonçalves, Laure Menin, Daniel Ortiz, Oksana Riba‐Grognuz, Akiko Koto, Zamira Guerra Soares, Eyal Privman et al. · 2016 · eLife
  12. Structural and Functional Annotation of Eukaryotic Genomes with GenSAS
    Jodi L. Humann, Taein Lee, Stephen Patrick Ficklin, Dorrie Main · 2019 · Methods in molecular biology
  13. Assembly Mechanism of Mucin and von Willebrand Factor Polymers
    Gabriel Javitt, Lev Khmelnitsky, Lis Albert, Lavi S. Bigman, Nadav Elad, David Morgenstern, Tal Ilani, Yaakov Levy, Ron Diskin, Deborah Fass · 2020 · Cell
  14. A Comparison of the Olfactory Gene Repertoires of Adults and Larvae in the Noctuid Moth Spodoptera littoralis
    Erwan Poivet, Aurore Gallot, Nicolas Montagné, Nicolas Glaser, Fabrice Legeai, Emmanuelle Jacquin‐Joly · 2013 · PLoS ONE
  15. Functional Diversity of Carbohydrate-Active Enzymes Enabling a Bacterium to Ferment Plant Biomass
    Magali Boutard, Tristan Cerisy, Pierre-Yves Nogue, Adriana Alberti, Jean Weissenbach, Marcel Salanoubat, Andrew C. Tolonen · 2014 · PLoS Genetics
  16. Building the sugarcane genome for biotechnology and identifying evolutionary trends
    Nathalia de Setta, Cláudia Barros Monteiro-Vitorello, Cushla J. Metcalfe, Guilherme M. Q. Cruz, Luiz‐Eduardo Del‐Bem, Renato Vicentini, Fábio Tebaldi Silveira Nogueira, Roberta Alvares Campos, Sideny Lima Nunes, Paula C. G. Turrini et al. · 2014 · BMC Genomics
  17. Rescue of Pompe disease in mice by AAV-mediated liver delivery of secretable acid α-glucosidase
    Francesco Puzzo, Pasqualina Colella, Maria Grazia Biferi, Deeksha Sarihyan Bali, Nicole K. Paulk, Patrice Vidal, Fanny Collaud, Marcelo Simon Sola, Séverine Charles, Romain Hardet et al. · 2017 · Science Translational Medicine
  18. The Apoplastic Secretome of Trichoderma virens During Interaction With Maize Roots Shows an Inhibition of Plant Defence and Scavenging Oxidative Stress Secreted Proteins
    Guillermo Nogueira-López, David R. Greenwood, Martin Middleditch, Christopher S. Winefield, Carla Jane Eaton, Johanna M. Steyaert, Artemio Mendoza‐Mendoza · 2018 · Frontiers in Plant Science
  19. New secreted toxins and immunity proteins encoded within the T ype VI secretion system gene cluster of S erratia marcescens
    Grant English, Katharina Trunk, Vincenzo A. Rao, Srikannathasan Velupillai, William N. Hunter, Sarah J. Coulthurst · 2012 · Molecular Microbiology
  20. Systems Analysis of Lactose Metabolism in Trichoderma reesei Identifies a Lactose Permease That Is Essential for Cellulase Induction
    Christa Ivanova, Jenny Arnling Bååth, Bernhard Seiboth, Christian Peter Kubicek · 2013 · PLoS ONE
  21. Quantitative Phosphoproteomic Analysis of Soybean Root Hairs Inoculated with Bradyrhizobium japonicum
    Tran H. Nguyen, Laurent Brechenmacher, Joshua T. Aldrich, Therese RW Clauss, Marina A. Gritsenko, Kim K. Hixson, Marc Libault, Kiwamu Tanaka, Feng Yang, Qiuming Yao et al. · 2012 · Molecular & Cellular Proteomics
  22. Overview of a Surface-Ripened Cheese Community Functioning by Meta-Omics Analyses
    Éric Dugat‐Bony, Cécile Straub, Aurélie Teissandier, Djamila Onésime, Valentin Loux, Christophe Monnet, Françoise Irlinger, Sophie Landaud, M.-N. Leclercq-Perlat, Pascal Bento et al. · 2015 · PLoS ONE
  23. Host-Microbe Protein Interactions during Bacterial Infection
    Devin K. Schweppe, Christopher L. Harding, Juan D. Chavez, Xia Wu, Elizabeth R. Ramage, Pradeep Kumar Singh, Colin Manoil, James E. Bruce · 2015 · Chemistry & Biology
  24. Searching the Evolutionary Origin of Epithelial Mucus Protein Components—Mucins and FCGBP
    Tiange Lang, Sofia Klasson, Erik Larsson, Malin Johansson, Gunnar C. Hansson, Tore Samuelsson · 2016 · Molecular Biology and Evolution
  25. The Evolution of Orphan Regions in Genomes of a Fungal Pathogen of Wheat
    Clémence Plissonneau, Alessandra Stürchler, Daniel Croll · 2016 · mBio
  26. Genome-Wide Identification of Medicago Peptides Involved in Macronutrient Responses and Nodulation
    Thomas C. de Bang, Peter Knut Lundquist, Xinbin Dai, Clarissa Boschiero, Zhaohong Zhuang, Pooja Pant, Ivone Torres‐Jerez, Sonali Roy, Joaquina Nogales, Vijaykumar Veerappan et al. · 2017 · PLANT PHYSIOLOGY
  27. Transcriptomic variation of hepatopancreas reveals the energy metabolism and biological processes associated with molting in Chinese mitten crab, Eriocheir sinensis
    Shu Huang, Jun Wang, Wucheng Yue, Jiao Chen, Sarah Gaughan, Weiqun Lu, Guoqing Lu, Chenghui Wang · 2015 · Scientific Reports
  28. Prioritization of potential vaccine targets using comparative proteomics and designing of the chimeric multi-epitope vaccine against Pseudomonas aeruginosa
    Vandana Solanki, Monalisa Tiwari, Vishvanath Tiwari · 2019 · Scientific Reports
  29. Computational Prediction of Effector Proteins in Fungi: Opportunities and Challenges
    Humira Sonah, Rupesh Kailasrao Deshmukh, Richard R. Bélanger · 2016 · Frontiers in Plant Science
  30. An integrated genomic and transcriptomic survey of mucormycosis-causing fungi
    Marcus C. Chibucos, Sameh S. M. Soliman, Teclegiorgis Gebremariam, Hong-Kyu Lee, Sean C. Daugherty, Joshua Orvis, Amol Carl Shetty, Jonathan Crabtree, Tracy H. Hazen, Kizee A. Etienne et al. · 2016 · Nature Communications
  31. A modular effector with a DNase domain and a marker for T6SS substrates
    Biswanath Jana, Chaya Mushka Fridman, Eran Bosis, Dor Salomon · 2019 · Nature Communications
  32. AvrPm2 encodes an RN ase‐like avirulence effector which is conserved in the two different specialized forms of wheat and rye powdery mildew fungus
    Coraline Rosalie Praz, Salim Bourras, Fansong Zeng, Javier Sánchez‐Martín, Fabrizio Menardo, Minfeng Xue, Lijun Yang, Stefan Roffler, Rainer Böni, Gerard Herren et al. · 2016 · New Phytologist
  33. VLDLR and ApoER2 are receptors for multiple alphaviruses
    Lars E. Clark, Sarah A. Clark, ChieYu Lin, Jianying Liu, Adrian Coscia, Katherine Nabel Smith, Pan Yang, Dylan V. Neel, Hyo Lee, Vesna Brusic et al. · 2021 · Nature
  34. Elongation factor Tu is a multifunctional and processed moonlighting protein
    Widjaja, Michael, Harvey, Kate Louise, Hagemann, Lisa, Berry, Iain James, Jarocki, Veronica Maria, Raymond, Benjamin Bernard Armando, Tacchi, Jessica Leigh, Gründel, Anne, Steele, Joel Ricky, Padula, Matthew Paul et al. · 2017 · Scientific Reports
  35. Quo Vadis Venomics? A Roadmap to Neglected Venomous Invertebrates
    Björn M. von Reumont, Lahcen I. Campbell, Ronald A. Jenner · 2014 · Toxins
  36. Analysis of the Secretome of Apoptotic Peripheral Blood Mononuclear Cells: Impact of Released Proteins and Exosomes for Tissue Regeneration
    Lucian Beer, Matthias Zimmermann, Andreas Mitterbauer, Adolf Ellinger, Флориан Грубер, Marie‐Sophie Narzt, Maria Zellner, Mariann Gyöngyösi, Sibylle Madlener, Elisabeth Simader et al. · 2015 · Scientific Reports
  37. Immunoinformatics design of a novel epitope-based vaccine candidate against dengue virus
    Adewale Oluwaseun Fadaka, Nicole Remaliah Samantha Sibuyi, Darius Riziki Martin, Mediline Goboza, Ashwil Klein, Abram Madimabe Madiehe, Mervin Meyer · 2021 · Scientific Reports
  38. Metabolic engineering of volatile isoprenoids in plants and microbes
    Claudia Estelle Vickers, Mareike Bongers, Qing Liu, Thierry Delatte, Harro J. Bouwmeester · 2014 · Plant Cell & Environment
  39. Optimisation of signal peptide for recombinant protein secretion in bacterial hosts
    Low, Kheng Oon, Muhammad Mahadi, Nor, Md. Illias, Rosli · 2013 · Applied Microbiology and Biotechnology
  40. Quantification of the N-glycosylated Secretome by Super-SILAC During Breast Cancer Progression and in Human Blood Samples
    Paul J. Boersema, Tamar Geiger, Jacek R. Wiśniewski, Matthias Mann · 2012 · Molecular & Cellular Proteomics
  41. An Intracellular Laccase is Responsible for the Epicatechin Mediated Anthocyanin Degradation in Litchi Fruit Pericarp
    Fang Fang, Xuelian Zhang, Honghui Luo, Jiajian Zhou, Yihui Gong, Wen‐Jun Li, Zhaowan Shi, Quan He, Qing Yu Wu, Lü Li et al. · 2015 · PLANT PHYSIOLOGY
  42. Class of cyclic ribosomal peptide synthetic genes in filamentous fungi
    Nozomi Nagano, Myco Umemura, Miho Izumikawa, Jin Kawano, Tomoko Ishii, Moto Kikuchi, Kentaro Tomii, Toshitaka Kumagai, Akira Yoshimi, Masayuki Machida et al. · 2015 · Fungal Genetics and Biology
  43. Functional analysis of a pathogenesis-related thaumatin-like protein gene TaLr35PR5 from wheat induced by leaf rust fungus
    Jiarui Zhang, Fei Wang, Fang Liang, Yanjun Zhang, Lisong Ma, Haiyan Wang, Daqun Liu · 2018 · BMC Plant Biology
  44. Comparative Analysis of the Peanut Witches'-Broom Phytoplasma Genome Reveals Horizontal Transfer of Potential Mobile Units and Effectors
    Wan-Chia Chung, Ling‐Ling Chen, Wen‐Sui Lo, Chan‐Pin Lin, Chih‐Horng Kuo · 2013 · PLoS ONE
  45. Functional genomics reveals that Clostridium difficileSpo0A coordinates sporulation, virulence and metabolism
    Laura J Pettit, Hilary P. Browne, Lu Yu, Wiep Klaas Smits, Robert P. Fagan, Lars Barquist, Melissa J. Martin, David Goulding, Sylvia H. Duncan, Harry James Flint et al. · 2014 · BMC Genomics
  46. Apicomplexan-like parasites are polyphyletic and widely but selectively dependent on cryptic plastid organelles
    Janouškovec, Jan, Paskerova, Gita G, Miroliubova, Tatiana S, Mikhailov, Kirill V, Birley, Thomas, Aleoshin, Vladimir V, Simdyanov, Timur G · 2019 · eLife
  47. Diversity of Conotoxin Gene Superfamilies in the Venomous Snail, Conus victoriae
    Samuel D. Robinson, Helena Safavi-­Hemami, Lachlan McIntosh, Anthony Wayne Purcell, Raymond S. Norton, Anthony T. Papenfuss · 2014 · PLoS ONE
  48. Proteomic Analysis of Cow, Yak, Buffalo, Goat and Camel Milk Whey Proteins: Quantitative Differential Expression Patterns
    Yongxin Yang, Dengpan Bu, Xiaowei Zhao, Peng Sun, Jiaqi Wang, Lingyun Zhou · 2013 · Journal of Proteome Research
  49. The genome sequence and effector complement of the flax rust pathogen Melampsora lini
    Adnane Nemri, Diane G. O. Saunders, Claire Anderson, Narayana M. Upadhyaya, Joe Win, Gregory J. Lawrence, David A. Jones, Sophien Kamoun, Jeffrey G. Ellis, Peter N. Dodds · 2014 · Frontiers in Plant Science
  50. Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation
    Sarah R. Smith, Jeroen Gillard, Adam B. Kustka, John P. McCrow, Jonathan H. Badger, Hong Zheng, Ashley M. New, Christopher L. Dupont, Toshihiro Obata, Alisdair Robert Fernie et al. · 2016 · PLoS Genetics
  51. Decay of the glycolytic pathway and adaptation to intranuclear parasitism within Enterocytozoonidae microsporidia
    Dominic Wiredu Boakye, Pattana Jaroenlak, Anuphap Prachumwat, Tom A. Williams, Kelly S. Bateman, Ornchuma Itsathitphaisarn, Kallaya Sritunyalucksana, Konrad H. Paszkiewicz, Karen Moore, Grant D. Stentiford et al. · 2017 · Environmental Microbiology
  52. The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata
    Daniele Armaleo, Olaf Müller, Francois M. Lutzoni, Ólafur S. Andrésson, Guillaume Blanc, Helge B. Bode, F. Collart, Francesco Dal Grande, Fred S. Dietrich, Igor V. Grigoriev et al. · 2019 · BMC Genomics
  53. Cellular Interactions in the Tumor Microenvironment: The Role of Secretome
    Bianca Rodrigues da Cunha, Célia Domingos, Ana Carolina Buzzo Stefanini, Tiago Henrique, Giovana Mussi Polachini, Pedro Castelo‐Branco, Eloíza H. Tajara · 2019 · Journal of Cancer
  54. Adropin Is a Brain Membrane-bound Protein Regulating Physical Activity via the NB-3/Notch Signaling Pathway in Mice
    Chi‐Ming Wong, Yudong Wang, Jimmy Tsz Hang Lee, Zhe Ping Huang, Donghai Wu, Aimin Xu, Karen S.L. Lam · 2014 · Journal of Biological Chemistry
  55. A secretomic view of woody and nonwoody lignocellulose degradation by Pleurotus ostreatus
    Elena Fernández‐Fueyo, Francisco Javier Ruiz-Dueñas, María F. López-Lucendo, Marta Pérez-Boada, Jorge Rencoret, Ana Gutiérrez, Antonio G. Pisabarro, Lucı́a Ramı́rez, Ángel T. Martı́nez · 2016 · Biotechnology for Biofuels
  56. Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic Growth Conditions
    Cristal Zúñiga, Chien‐Ting Li, Tyler Huelsman, Jennifer Levering, Daniel Craig Zielinski, Brian O. McConnell, Christopher P. Long, Eric P. Knoshaug, Michael Thomas Guarnieri, Maciek R. Antoniewicz et al. · 2016 · PLANT PHYSIOLOGY
  57. TonB-Dependent Receptor Repertoire of Pseudomonas aeruginosa for Uptake of Siderophore-Drug Conjugates
    Alexandre Lüscher, L. Moynié, Pamela Saint Auguste, Dirk Bumann, Léna Mazza, Daniel Pletzer, James H. Naismith, Thilo Köhler · 2018 · Antimicrobial Agents and Chemotherapy
  58. A UDP-Glucose:Monoterpenol Glucosyltransferase Adds to the Chemical Diversity of the Grapevine Metabolome
    Friedericke Bönisch, Johanna Frotscher, Sarah Stanitzek, Ernst Rühl, Matthias Wüst, Oliver Bitz, Wilfried G. Schwab · 2014 · PLANT PHYSIOLOGY
  59. Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions
    Stefan Dippel, Georg Oberhofer, Jörg Kahnt, Lizzy Gerischer, Lennart Opitz, Joachim Schachtner, Mario Stanke, Stefan Schütz, Ernst A. Wimmer, Sergio Angeli · 2014 · BMC Genomics
  60. SmedGD 2.0: The Schmidtea mediterranea genome database
    Sofia M. C. Robb, Kirsten Gotting, Eric J. Ross, Alejandro Sánchez Alvarado · 2015 · genesis
  61. Characterization of Outer Membrane Proteome of Akkermansia muciniphila Reveals Sets of Novel Proteins Exposed to the Human Intestine
    Noora Ottman, Laura Huuskonen, Justus Reunanen, Sjef A. Boeren, Judith Klievink, Hauke Smidt, Clara Belzer, Willem M. de Vos · 2016 · Frontiers in Microbiology
  62. Rickettsia Sca4 Reduces Vinculin-Mediated Intercellular Tension to Promote Spread
    Rebecca L. Lamason, Effie Bastounis, Natasha M. Kafai, Ricardo Serrano, Juan C. del Álamo, Julie A. Theriot, Matthew D. Welch · 2016 · Cell
  63. ArachnoServer 3.0: an online resource for automated discovery, analysis and annotation of spider toxins
    Sandy S. Pineda, Pierre-Alain Chaumeil, Anne Kunert, Quentin Kaas, Mike W. C. Thang, Lien Le, Michael Nuhn, Volker Herzig, Natalie J. Saez, Ben Cristofori‐Armstrong et al. · 2017 · Bioinformatics
  64. Virulence Factors Produced by Staphylococcus aureus Biofilms Have a Moonlighting Function Contributing to Biofilm Integrity
    Alexander C. Graf, Anne Leonard, Manuel Schäuble, Lisa M. Rieckmann, Juliane Hoyer, Sandra Maaß, Michael Lalk, Dörte Becher, Jan Pané‐Farré, Katharina Riedel · 2019 · Molecular & Cellular Proteomics
  65. A Membrane-Bound Cytochrome Enables Methanosarcina acetivorans To Conserve Energy from Extracellular Electron Transfer
    Dawn E. Holmes, Toshiyuki Ueki, Haiyan Tang, Jinjie Zhou, Jessica A. Smith, Gina Chaput, Derek R. Lovley · 2019 · mBio
  66. Hen uterine gene expression profiling during eggshell formation reveals putative proteins involved in the supply of minerals or in the shell mineralization process
    Aurélien Brionne, Yves Y. Nys, Christelle Hennequet‐Antier, Joël Gautron · 2014 · BMC Genomics
  67. PelA Deacetylase Activity Is Required for Pel Polysaccharide Synthesis in Pseudomonas aeruginosa
    Kelly M. Colvin, Noor Alnabelseya, Perrin Baker, John C. C. Whitney, P. Lynne Howell, Matthew R. Parsek · 2013 · Journal of Bacteriology
  68. Galactomannan Catabolism Conferred by a Polysaccharide Utilization Locus of Bacteroides ovatus
    Viktoria Bågenholm, Sumitha K. Reddy, Hanene Bouraoui, Johan Morrill, Evelina Kulcinskaja, Constance M. E. Bahr, Oskar Aurelius, Theresa E. Rogers, Yao Xiao, Derek T. Logan et al. · 2016 · Journal of Biological Chemistry
  69. An online resource for GPCR structure determination and analysis
    Christian Munk, Eshita Mutt, Vignir Ísberg, Louise F. Nikolajsen, Janne M. Bibbe, Tilman Flock, Michael A. Hanson, Raymond C. Stevens, Xavier Deupí, David E.I. Gloriam · 2019 · Nature Methods
  70. Origin and evolution of lysyl oxidases
    Xavier Grau‐Bové, Iñaki Ruiz‐Trillo, Fernando Rodríguez‐Pascual · 2015 · Scientific Reports
  71. The human transmembrane proteome
    László Dobson, István Reményi, Gábor Tusnády · 2015 · Biology Direct
  72. A Secreted Tyrosine Kinase Acts in the Extracellular Environment
    Mattia Renato Bordoli, Jina Yum, Susanne B. Breitkopf, Jonathan N. Thon, Joseph E. Italiano, Junyu Xiao, Carolyn A. Worby, Swee-Kee Wong, Grace Lin, Maja Edenius et al. · 2014 · Cell
  73. Ef7 Encodes an ELF3-like Protein and Promotes Rice Flowering by Negatively Regulating the Floral Repressor Gene Ghd7 under Both Short- and Long-Day Conditions
    Hiroki Saito, Eri Ogiso‐Tanaka, Yutaka Okumoto, Yoshihiro Yoshitake, Haruka Izumi, Takayuki Yokoo, Kazuki Matsubara, Kiyosumi Hori, Masahiro Yano, Hiromo Inoue et al. · 2012 · Plant and Cell Physiology
  74. Contrasting host–pathogen interactions and genome evolution in two generalist and specialist microsporidian pathogens of mosquitoes
    Christopher A. Desjardins, Neil D. Sanscrainte, Jonathan M. Goldberg, David I. Heiman, Sarah Young, Qiandong Zeng, Hiten D. Madhani, James J. Becnel, Christina A. Cuomo · 2015 · Nature Communications
  75. Linking Exoproteome Function and Structure to Anammox Biofilm Development
    Zijian Chen, Yabing Meng, Binbin Sheng, Zhongbo Zhou, Chao Jin, Fangang Meng · 2019 · Environmental Science & Technology
  76. Exploitation of the Leishmania exosomal pathway by Leishmania RNA virus 1
    Vanessa Diniz Atayde, Alonso da Silva Lira Filho, Visnú Chaparro, Aude Zimmermann, Caroline Martel, Maritza Jaramillo, Martin Olivier · 2019 · Nature Microbiology
  77. Complete Genome Sequence of Sporisorium scitamineum and Biotrophic Interaction Transcriptome with Sugarcane
    Lucas Mitsuo Taniguti, Patrícia Dayane Carvalho Schaker, Juliana Benevenuto, Leila Priscila Peters, Giselle Carvalho, A. Palhares, Maria Carolina Quecine, Filipe Rafael Salvetti Nunes, Maria Carolina Pezzo Kmit, Alvan Wai et al. · 2015 · PLoS ONE
  78. Robust cuticular penetration resistance in the common bed bug (Cimex lectularius L.) correlates with increased steady-state transcript levels of CPR-type cuticle protein genes
    Reina Koganemaru, Dini Miller, Zach N. Adelman · 2013 · Pesticide Biochemistry and Physiology
  79. Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom
    Jennifer Levering, Jared T. Broddrick, Christopher L. Dupont, Graham Peers, Karen Beeri, Joshua J. Mayers, Alessandra A. Gallina, Andrew Ellis Allen, Bernhard Ørn Palsson, Karsten Zengler · 2016 · PLoS ONE
  80. Global Distribution Patterns and Pangenomic Diversity of the Candidate Phylum “Latescibacteria” (WS3)
    Ibrahim Farag, Noha H. Youssef, Mostafa S. Elshahed · 2017 · Applied and Environmental Microbiology
  81. Characterization of Trichuris muris secreted proteins and extracellular vesicles provides new insights into host–parasite communication
    Ramon M. Eichenberger, Md Hasanuzzaman Talukder, Matthew A. Field, Phurpa Wangchuk, Paul Giacomin, Alex C. Loukas, Javier Sotillo · 2018 · Journal of Extracellular Vesicles
  82. Deacetylation of Fungal Exopolysaccharide Mediates Adhesion and Biofilm Formation
    Lee, Mark J., Geller, Alexander M., Bamford, Natalie C., Liu, Hong, Gravelat, Fabrice N., Snarr, Brendan D., Le Mauff, François, Chabot, Joseé, Ralph, Benjamin, Ostapska, Hanna et al. · 2016 · mBio
  83. Convolutional LSTM Networks for Subcellular Localization of Proteins
    Søren Kaae Sønderby, Casper Kaae Sønderby, Henrik Nielsen, Ole Winther · 2015 · Lecture notes in computer science
  84. A Phylogenomic Analysis of the Bacterial Phylum Fibrobacteres
    Nurdyana Abdul Rahman, Donovan H. Parks, Inka Vanwonterghem, Mark Morrison, Gene W. Tyson, Philip Hugenholtz · 2016 · Frontiers in Microbiology
  85. Structure and Function of the PiuA and PirA Siderophore-Drug Receptors from Pseudomonas aeruginosa and Acinetobacter baumannii
    L. Moynié, Alexandre Lüscher, Dora Rolo, Daniel Pletzer, Antoni Tortajada, Helge Weingart, Yvonne Braun, Malcolm G. P. Page, James H. Naismith, Thilo Köhler · 2017 · Antimicrobial Agents and Chemotherapy
  86. Linking extracellular enzymes to phylogeny indicates a predominantly particle-associated lifestyle of deep-sea prokaryotes
    Zihao Zhao, Federico Baltar, Gerhard J. Herndl · 2020 · Science Advances
  87. Engineering ecosystems and synthetic ecologies
    Michael T. Mee, Harris H. Wang · 2012 · Molecular BioSystems
  88. Diversity and Evolution of Type IV pili Systems in Archaea
    Kira S. Makarova, Eugene V. Koonin, Sonja‐Verena Albers · 2016 · Frontiers in Microbiology
  89. Lignin depolymerization by fungal secretomes and a microbial sink
    Davinia Salvachúa, Rui Katahira, Nicholas S. Cleveland, Payal Khanna, Michael G. Resch, Brenna A. Black, Samuel Owen Purvine, Erika Zink, Alicia Prieto, Marı́a Jesús Martı́nez et al. · 2016 · Green Chemistry
  90. Lateral Gene Transfer in the Adaptation of the Anaerobic Parasite Blastocystis to the Gut
    Laura Eme, Eleni Gentekaki, Bruce A. Curtis, John M. Archibald, Andrew J. Roger · 2017 · Current Biology
  91. Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae
    David J. Winter, Austen R. D. Ganley, Carolyn A. Young, Ivan Liachko, Christopher Lewis Schardl, Pierre‐Yves Dupont, Daniel Berry, Arvina Ram, Barry Scott, Murray P. Cox · 2018 · PLoS Genetics
  92. Epidermal LysM receptor ensures robust symbiotic signalling in Lotus japonicus
    Eiichi Murakami, Jeryl Cheng, Kira Gysel, Zoltán Bozsóki, Yasuyuki Kawaharada, Christian Toftegaard Hjuler, Kasper K. Sørensen, Ke Tao, Simon J. Kelly, Francesco Venice et al. · 2018 · eLife
  93. Streptococcal superantigens: categorization and clinical associations
    Robert J. Commons, Pierre Robert Smeesters, Thomas Proft, John D. Fraser, Roy Michael Robins-Browne, Nigel C Curtis · 2013 · Trends in Molecular Medicine
  94. Transcriptome and venom proteome of the box jellyfish Chironex fleckeri
    Diane L. Brinkman, Xinying Jia, Jeremy Potriquet, Dhirendra Kumar, Debasis Dash, David Kvaskoff, Jason P. Mulvenna · 2015 · BMC Genomics
  95. Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
    Sarahi L. Garcia, Katherine D. McMahon, Manuel Martínez‐García, Abhishek Srivastava, Alexander Sczyrba, Ramūnas Stepanauskas, Hans‐Peter Grossart, Tanja Woyke, Falk Warnecke · 2012 · The ISME Journal
  96. The Salivary Protein Repertoire of the Polyphagous Spider Mite Tetranychus urticae: A Quest for Effectors
    Wim Jonckheere, Wannes Dermauw, Vladimir Zhurov, Nicky Wybouw, Jan Van den Bulcke, Carlos A. Villarroel, Robert Greenhalgh, Mike Grbić, Rob Schuurink, Luc Tirry et al. · 2016 · Molecular & Cellular Proteomics
  97. A conserved bacterial protein induces pancreatic beta cell expansion during zebrafish development
    Jennifer Hampton Hill, Eric A. Franzosa, Curtis Huttenhower, Karen J. Guillemin · 2016 · eLife
  98. CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched genes dispensable for male fertility in mice†
    Yonggang Lu, Seiya Oura, Takafumi Matsumura, Asami Oji, Nobuyuki Sakurai, Yoshitaka Fujihara, Keisuke Shimada, Haruhiko Miyata, Tomohiro Tobita, Taichi Noda et al. · 2019 · Biology of Reproduction
  99. Genomes and Transcriptomes of Partners in Plant-Fungal- Interactions between Canola (Brassica napus) and Two Leptosphaeria Species
    Rohan G. T. Lowe, Andrew M. Cassin, Jonathan Grandaubert, Bethany L. Clark, Angela P. Van de Wouw, Thierry Rouxel, Barbara J. Howlett · 2014 · PLoS ONE
  100. Identifying a Carotenoid Cleavage Dioxygenase (ccd4) Gene Controlling Yellow/White Fruit Flesh Color of Peach
    Marco Adami, Paolo De Franceschi, Federica Brandi, A. Liverani, D. Giovannini, Carlo Rosati, Luca Dondini, Stefano Tartarini · 2013 · Plant Molecular Biology Reporter