The DOI matches its Crossref record; 28 of the 28 references it cites were found in a registry or an index.
Mining the O-glycoproteome using zinc-finger nuclease–glycoengineered SimpleCell lines
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Julenius, K., Mølgaard, A., Gupta, R., & Brunak, S. (2005) · Glycobiology · doi:10.1093/glycob/cwh151 · Cited by 872
Carbohydrates in Chemistry and Biology
Ernst, B., Hart, G. W., & Sinaý, P. (2000) · Wiley eBooks · doi:10.1002/9783527618255 · Cited by 594
Polypeptide GalNAc-transferase T3 and Familial Tumoral Calcinosis
Kato, K., Jeanneau, C., Tarp, M. A., Benet-Pagès, A., Lorenz-Depiereux, B., Bennett, E. P., Mandel, U., Strom, T. M., & Clausen, H. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m602469200 · Cited by 423
Self-citationTargeted gene knockout in mammalian cells by using engineered zinc-finger nucleases
Santiago, Y., Chan, E., Liu, P.-Q., Orlando, S., Zhang, L., Urnov, F. D., Holmes, M. C., Guschin, D., Waite, A., Miller, J. C., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0800940105 · Cited by 358
Enrichment of glycopeptides for glycan structure and attachment site identification
Nilsson, J., Rüetschi, U., Halim, A., Hesse, C., Carlsohn, E., Brinkmalm, G., & Larson, G. (2009) · Nature Methods · doi:10.1038/nmeth.1392 · Cited by 322
Biochemical Characterization of CA IX, One of the Most Active Carbonic Anhydrase Isozymes
Hilvo, M., Baranauskiene, L., Salzano, A. M., Scaloni, A., Matulis, D., Innocenti, A., Scozzafava, A., Monti, S. M., Di Fiore, A., De Simone, G., et al. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m800938200 · Cited by 307
Wandall, H. H., Hassan, H., Mirgorodskaya, E., Kristensen, A. K., Roepstorff, P., Bennett, E. P., Nielsen, P. A., Hollingsworth, M. A., Burchell, J., Taylor-Papadimitriou, J., et al. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.38.23503 · Cited by 303
Self-citationHuman Tumor Antigens Tn and Sialyl Tn Arise from Mutations in Cosmc
Ju, T., Lanneau, G. S., Gautam, T., Wang, Y., Xia, B., Stowell, S. R., Willard, M. T., Wang, W., Xia, J. Y., Zuna, R. E., et al. (2008) · Cancer Research · doi:10.1158/0008-5472.can-07-2345 · Cited by 292
Location, location, location: new insights into O-GalNAc protein glycosylation
Gill, D. J., Clausen, H., & Bard, F. (2011) · Trends in Cell Biology · doi:10.1016/j.tcb.2010.11.004 · Cited by 246
Self-citationHalim, A., Brinkmalm, G., Rüetschi, U., Westman-Brinkmalm, A., Portelius, E., Zetterberg, H., Blennow, K., Larson, G., & Nilsson, J. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1102664108 · Cited by 246
Röttger, S., White, J., Wandall, H. H., Olivo, J.-C., Stark, A., Bennett, E. P., Whitehouse, C., Berger, E. G., Clausen, H., & Nilsson, T. (1998) · Journal of Cell Science · doi:10.1242/jcs.111.1.45 · Cited by 239
Chalkley, R. J., Thalhammer, A., Schoepfer, R., & Burlingame, A. L. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0900288106 · Cited by 237
Cosmc is an essential chaperone for correct protein O-glycosylation
Wang, Y., Ju, T., Ding, X., Xia, B., Wang, W., Xia, L., He, M., & Cummings, R. D. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0914004107 · Cited by 212
Schwientek, T., Bennett, E. P., Flores, C., Thacker, J., Hollmann, M., Reis, C. A., Behrens, J., Mandel, U., Keck, B., Schäfer, M. A., et al. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m202684200 · Cited by 181
Self-citationKingsley, D. M., Kozarsky, K. F., Segal, M., & Krieger, M. (1986) · The Journal of cell biology · doi:10.1083/jcb.102.5.1576 · Cited by 175
Iwai, T., Kudo, T., Kawamoto, R., Kubota, T., Togayachi, A., Hiruma, T., Okada, T., Kawamoto, T., Morozumi, K., & Narimatsu, H. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407983102 · Cited by 159
O-Glycosylation Modulates Proprotein Convertase Activation of Angiopoietin-like Protein 3
Schjoldager, K. T.-B. G., Vester-Christensen, M. B., Bennett, E., Levery, S. B., Schwientek, T., Yin, W., Blixt, O., & Clausen, H. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.156950 · Cited by 135
Self-citationPerdivara, I., Petrovich, R. M., Allinquant, B., Deterding, L. J., Tomer, K. B., & Przybylski, M. (2008) · Journal of Proteome Research · doi:10.1021/pr800758g · Cited by 133
A new tumor-specific variant of GRP78 as target for antibody-based therapy
Rauschert, N., Brändlein, S., Holzinger, E., Hensel, F., Müller–Hermelink, H., & Vollmers, H. P. (2008) · Laboratory Investigation · doi:10.1038/labinvest.2008.2 · Cited by 130
Mandel, U., Hassan, H., Therkildsen, M. H., Rygaard, J., Jakobsen, M. H., Juhl, B. R., Dabelsteen, E., & Clausen, H. (1999) · Glycobiology · doi:10.1093/glycob/9.1.43 · Cited by 113
Self-citationTenno, M., Ohtsubo, K., Hagen, F. K., Ditto, D., Zarbock, A., Schaerli, P., von Andrian, U. H., Ley, K. F., Le, D., Tabak, L. A., et al. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.01204-07 · Cited by 109
Stalnaker, S. H., Hashmi, S., Lim, J.-M., Aoki, K., Porterfield, M., Gutiérrez‐Sánchez, G., WHEELER, J. L., Ervasti, J. M., Bergmann, C., Tiemeyer, M., et al. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.126474 · Cited by 99
Affinity Enrichment and Characterization of Mucin Core-1 Type Glycopeptides from Bovine Serum
Darula, Z., & Medzihradszky, K. F. (2009) · Molecular & Cellular Proteomics · doi:10.1074/mcp.m900211-mcp200 · Cited by 88
Nilsson, J., Nilsson, J., Larson, G., & Grahn, A. (2010) · Glycobiology · doi:10.1093/glycob/cwq082 · Cited by 82
Identification of the O-linked glycosylation site of the human transferrin receptor
Hayes, G. R., Enns, C. A., & Lucas, J. J. (1992) · Glycobiology · doi:10.1093/glycob/2.4.355 · Cited by 60
Charlier, E., Condé, C., Zhang, J., Deneubourg, L., Valentin, E. D., Rahmouni, S., Chariot, A., Agostinis, P., Pang, P.-C., Haslam, S. M., et al. (2010) · Leukemia · doi:10.1038/leu.2010.9 · Cited by 47
Hassan, H., Bennett, E., Mandel, V., Hollingsworth, M. A., & Clausen, H. (2000) · Carbohydrates in Chemistry and Biology · doi:10.1002/9783527618255.ch55 · Cited by 25
Self-citationTemporal aspects of O-glycosylation of glycoprotein C from herpes simplex virus type-1
Serafini‐Cessi, F., Dall’Olio, F., Malagolini, N., & Campadelli‐Fiume, G. (1989) · Biochemical Journal · doi:10.1042/bj2620479 · Cited by 18
Cited by
Precision mapping of the human O‐GalNAc glycoproteome through SimpleCell technology
Steentoft, C., Vakhrushev, S. Y., Joshi, H. J., Kong, Y., Vester‐Christensen, M. B., Schjoldager, K. T. G., Lavrsen, K., Dabelsteen, S., Pedersen, N. B., Marcos‐Silva, L., et al. (2013) · The EMBO Journal · doi:10.1038/emboj.2013.79 · Cited by 1,408
Self-citationA guide to genome engineering with programmable nucleases
Kim, H., & Kim, J.-S. (2014) · Nature Reviews Genetics · doi:10.1038/nrg3686 · Cited by 1,163
Bennett, E. P., Mandel, U., Clausen, H., Gerken, T. A., Fritz, T. A., & Tabak, L. A. (2012) · Glycobiology · doi:10.1093/glycob/cwr182 · Cited by 876
Self-citationGlycosylation: mechanisms, biological functions and clinical implications
He, M., Zhou, X., & Wang, X. (2024) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-024-01886-1 · Cited by 499
Immature truncated O-glycophenotype of cancer directly induces oncogenic features
Radhakrishnan, P., Dabelsteen, S., Madsen, F. B., Francavilla, C., Kopp, K. L., Steentoft, C., Vakhrushev, S. Y., Olsen, J. V., Hansen, L., Bennett, E. P., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1406619111 · Cited by 313
Self-citation
Metadata
- Authors
- Steentoft, C., Vakhrushev, S. Y., Vester-Christensen, M. B., Schjoldager, K. T.-B. G., Kong, Y., Bennett, E. P., Mandel, U., Wandall, H., Levery, S. B., & Clausen, H.
- Venue
- Nature Methods
- Published
- 2011-10-09
- Volume
- 8
- Issue
- 11
- Pages
- 977-982
- ISSN
- 1548-7091 (ISSN-L)
- 1548-7105
- OpenAlex
- W2070552573
- Cited by
- 349
- References
- 28
- FWCI
- 10.58
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
