Massively parallel single-nucleus RNA-seq with DroNc-seq

Habib, Naomi, Avraham-Davidi, Inbal, Basu, Anindita, Burks, Tyler, Shekhar, Karthik, Hofree, Matan, Choudhury, Sourav R, Aguet, François +6 more·2017·Nature Methods

Cited by (1,000)

Items 601–700 of 1,000

  1. Regional brain iron correlates with transcriptional and cellular signatures in Alzheimer's disease
    Aocai Yang, Jixin Luan, Manxi Xu, Lei Du, Kuan Lv, Pianpian Hu, Ni Shu, Zhen Yuan, Amir Shmuel, Guolin Ma · 2025 · Alzheimer s & Dementia
  2. Single-Cell High-Throughput Technologies in Cerebrospinal Fluid Research and Diagnostics
    Tobias Volker Lanz, Anne‐Katrin Pröbstel, Iris C. Mildenberger, Michael Platten, Lucas Schirmer · 2019 · Frontiers in Immunology
  3. N-cadherin (Cdh2) Maintains Migration and Postmitotic Survival of Cortical Interneuron Precursors in a Cell-Type-Specific Manner
    Zsófia I. László, Kinga Bercsényi, Mátyás Mayer, Kornél Lefkovics, Gábor Szabó, István Katona, Zsolt Lele · 2019 · Cerebral Cortex
  4. Revolutionizing Cancer Immunology: The Power of Next-Generation Sequencing Technologies
    Meromit Singer, Ana Carrizosa Anderson · 2019 · Cancer Immunology Research
  5. Comprehensive multi-omics single-cell data integration reveals greater heterogeneity in the human immune system
    Congmin Xu, Junkai Yang, Astrid Kosters, Benjamin R. Babcock, Peng Qiu, Eliver Ghosn · 2022 · iScience
  6. Optogenetic Control of the Peripheral Nervous System
    Rui B. Chang · 2019 · Cold Spring Harbor Perspectives in Medicine
  7. Copolymerization of single-cell nucleic acids into balls of acrylamide gel
    Siran Li, Jude Kendall, Sarah Park, Zihua Wang, Joan Alexander, Andrea B. Moffitt, Nissim Ranade, Cassidy Danyko, Bruno Gegenhuber, Stephan Fischer et al. · 2019 · Genome Research
  8. Profiling the molecular signature of Satellite Glial Cells at the single cell level reveals high similarities between rodent and human
    Oshri Avraham, Alexander G. Chamessian, Rui Feng · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  9. The neuroinflammatory interleukin-12 signaling pathway drives Alzheimer’s disease-like pathology by perturbing oligodendrocyte survival and neuronal homeostasis
    Shirin Schneeberger, Seung Joon Kim, Pascale Eede, Anastasiya Boltengagen, Caroline Braeuning, Myrto Andreadou, Burkhard Becher, Nikos Karaiskos, Christine Kocks, Nikolaus Rajewsky et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  10. Differences in molecular sampling and data processing explain variation among single-cell and single-nucleus RNA-seq experiments
    John Chamberlin, Younghee Lee, Gábor Marth, Aaron R. Quinlan · 2024 · Genome Research
  11. From Omics to Applications: How Bioinformatics and Multi-Omics Approaches Are Revolutionizing Metal Bioleaching
    Rosina Nkuna, Nikwando Mohlomi, Tonderayi Sylvester Matambo · 2026 · Minerals
  12. Pico-washing: simultaneous liquid addition and removal for continuous-flow washing of microdroplets
    Michael J. Siedlik, David Issadore · 2022 · Microsystems & Nanoengineering
  13. Advanced sequencing-based high-throughput and long-read single-cell transcriptome analysis
    Shanqing Huang, Weixiong Shi, Shiyu Li, Qian Fan, Chaoyong James Yang, Jiao Cao, Lingling Wu · 2024 · Lab on a Chip
  14. What Have Advances in Transcriptomic Technologies Taught us About Human White Matter Pathologies?
    Sarah Jäkel, Anna Williams · 2020 · Frontiers in Cellular Neuroscience
  15. Isolation of Nuclei from Mouse Dorsal Root Ganglia for Single-nucleus Genomics
    Lite Yang, Ivan Tochitsky, Clifford J. Woolf · 2021 · BIO-PROTOCOL
  16. The Advances of Single-Cell RNA-Seq in Kidney Immunology
    Honghui Zeng, Xiaoqiang Yang, Siweier Luo, Yiming Zhou · 2021 · Frontiers in Physiology
  17. New insights into Human Hematopoietic Stem and Progenitor Cells via Single-Cell Omics
    Yawen Zhang, Yaojin Huang, Linping Hu, Tao Cheng · 2022 · Stem Cell Reviews and Reports
  18. Characterizing dysregulations via cell-cell communications in Alzheimer’s brains using single-cell transcriptomes
    Che-Yu Lee, Dylan Riffle, Yifeng Xiong, Nadia Momtaz, Yutong Lei, Joseph M Pariser, Diptanshu Sikdar, Ahyeon Hwang, Ziheng Duan, Jing Zhang · 2024 · BMC Neuroscience
  19. Mapping Molecular Datasets Back to the Brain Regions They are Extracted from: Remembering the Native Countries of Hypothalamic Expatriates and Refugees
    Arshad M. Khan, Alice H. Grant, Anais Martinez, Gully Burns, Brendan S. Thatcher, Vishwanath T. Anekonda, Benjamin W. Thompson, Zachary S. Roberts, Daniel H. Moralejo, James Ernest Blevins · 2018 · Advances in neurobiology
  20. Lessons from single cell sequencing in CNS cell specification and function
    Zhen Li, William A. Tyler, Tarik F. Haydar · 2020 · Current Opinion in Genetics & Development
  21. An integrated genomic approach to dissect the genetic landscape regulating the cell-to-cell transfer of α-synuclein
    Eleanna Kara, Alessandro Crimi, Anne E. Wiedmer, Marc Emmenegger, Claudia Manzoni, Sara Bandrés‐Ciga, Karishma D’Sa, Regina Hertfelder Reynolds, Juan Antonio Botía, Marco Losa et al. · 2021 · Cell Reports
  22. Single-nucleus RNA-Seq reveals a new type of brown adipocyte regulating thermogenesis
    Wenfei Sun, Hua Dong, Miroslav Baláž, M. Slyper, E. Drokhlyansky, G. Colleluori, A. Giordano, Z. Kovaničová, P. Stefanicka, L. Ding et al. · 2020 · bioRxiv
  23. New insights into liver injury and regeneration from single-cell transcriptomics
    Yankai Wen, Cynthia Ju · 2025 · eGastroenterology
  24. Single-nuclei RNA sequencing unveils astrocyte and oligodendrocyte lineage cells in post-stroke human brain
    Chengcheng Zhao, Yao Xiuhua, Lina Qiu, Yilin Ma, Yue Zhang, Tao Chen, Yanqin Geng, Zhongzhen Li, Shupeng Sun, Fang Guo et al. · 2025 · Experimental Neurology
  25. Small RNA transcriptome analysis using parallel single-cell small RNA sequencing
    Jia Li, Zhirong Zhang, Yinghua Zhuang, Fengchao Wang, Tao Cai · 2023 · Scientific Reports
  26. Human liver single nuclear RNA sequencing implicates BMPR2, GDF15, arginine, and estrogen in portopulmonary hypertension
    Arun Jose, Jean Elwing, Steven M. Kawut, Michael W. Pauciulo, Kenneth E. Sherman, William C. Nichols, Michael B. Fallon, Francis X. McCormack · 2023 · Communications Biology
  27. Implications of tumour heterogeneity on cancer evolution and therapy resistance: lessons from breast cancer
    Shefali Thakur, Syed Aleem Haider, Rachael Natrajan · 2023 · The Journal of Pathology
  28. Developmental maturation and regional heterogeneity but no sexual dimorphism of the murine CNS myelin proteome
    Sophie B. Siems, Vasiliki‐Ilya Gargareta, Leonie C. Schadt, Vinícius Daguano Gastaldi, Ramona B. Jung, Lars Piepkorn, Patrizia Casaccia, Ting Sun, Olaf Jahn, Hauke B. Werner · 2024 · Glia
  29. Dissection of single-cell landscapes for the development of chimeric antigen receptor T cells in Hodgkin lymphoma
    Adrian Gottschlich, Ruth Grünmeier, Gordon Victor Hoffmann, Sayantan Nandi, Vladyslav Kavaka, Philipp Jie Müller, Jakob Jobst, Arman Öner, Rainer W. J. Kaiser, Jan Gärtig et al. · 2025 · Blood
  30. Recent Advances in Microfluidic Techniques for Systems Biology
    Gongchen Sun, Hang Lu · 2018 · Analytical Chemistry
  31. The future of microfluidics in immune checkpoint blockade
    Jonathan Briones, Wilfred Villariza Espulgar, Shohei Koyama, Hyota Takamatsu, Eiichi Tamiya, Masato Saito · 2020 · Cancer Gene Therapy
  32. Application of single cell genomics to focal epilepsies: A call to action
    Sattar Khoshkhoo, Dennis Lal, Christopher A. Walsh · 2021 · Brain Pathology
  33. Single nuclei RNA sequencing investigation of the Purkinje cell and glial changes in the cerebellum of transgenic Spinocerebellar ataxia type 1 mice
    Ella Borgenheimer, Katherine A. Hamel, Carrie A. Sheeler, Francisco Emmanuel Labrada-Moncada, Kaelin Sbrocco, Ying Zhang, Marija Cvetanović · 2022 · Frontiers in Cellular Neuroscience
  34. Heterogeneity of fibroblasts is a Hallmark of age-associated erectile dysfunction.
    Qi-Wei Liu, Yu-Long Song, Yubin Cui, Cheng Hu, Yun Luo, Dao-Yuan Hu, Hua Wang, Ke Li, Jun Chen, Heng-Jun Xiao · 2022 · International Journal of Biochemistry and Cell Biology
  35. Assessing Markovian and Delay Models for Single-Nucleus RNA Sequencing
    Gennady Gorin, Shawn R. Yoshida, Lior S. Pachter · 2023 · Bulletin of Mathematical Biology
  36. Single-Cell RNA Sequencing: A New Window into Cell Scale Dynamics
    Sabyasachi Dasgupta, Gary D. Bader, Sidhartha Goyal · 2018 · Biophysical Journal
  37. Cell type-specific histone acetylation profiling of Alzheimer’s Disease subjects and integration with genetics
    Easwaran Ramamurthy, Gwyneth Welch, Jemmie Cheng, Yixin Yuan, Laura M. Gunsalus, David Alan Bennett, Li‐Huei Tsai, Andreas R. Pfenning · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  38. scID: Identification of equivalent transcriptional cell populations across single cell RNA-seq data using discriminant analysis
    Katerina Boufea, Sohan Seth, Nizar N. Batada · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  39. Establishment of a simplified preparation method for single-nucleus RNA-sequencing and its application to long-term frozen tumor tissues
    Kati Ernst, Konstantin Okonechnikov, Josephine Bageritz, Jan‐Philipp Mallm, Andrea Wittmann, Kendra K. Maaß, Svenja Leible, Michael Boutros, Stefan Michael Pfister, Marc Zuckermann et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  40. Isolating Nuclei From Frozen Human Heart Tissue for Single‐Nucleus RNA Sequencing
    Sina Safabakhsh, Funda Sar, Luciano Gastón Martelotto · 2022 · Current Protocols
  41. Quantification and statistical modeling of droplet-based single-nucleus RNA-sequencing data
    Albert Kuo, Kasper D. Hansen, Stephanie C. Hicks · 2023 · Biostatistics
  42. Updated skin transcriptomic atlas depicted by reciprocal contribution of single-nucleus RNA sequencing and single-cell RNA sequencing
    Ronghui Zhu, Xiaoyu Pan, Shangshang Wang · 2023 · Journal of Dermatological Science
  43. SP6 controls human cytotrophoblast fate decisions and trophoblast stem cell establishment by targeting MSX2 regulatory elements
    Yanglin Chen, Xianhua Ye, Yulong Zhong, Xiangjin Kang, Yanqing Tang, Haoyun Zhu, Changmiao Pang, Shaoqiang Ning, Shiqing Liang, Feifan Zhang et al. · 2024 · Developmental Cell
  44. Single-Nucleus RNA-Seq Reveals Spermatogonial Stem Cell Developmental Pattern in Shaziling Pigs
    Xiangwei Tang, Chujie Chen, Saina Yan, An-Qi Yang, Yanhong Deng, Bin Chen, Jingjing Gu · 2024 · Biomolecules
  45. Azotobacter Modulate Nitrogen Assimilation, Sustain Light Harvesting Efficiency and Photosynthetic Performance of Maize Cultivar in a Saline Soil
    Komal Nida, Zamin Shaheed Siddiqui, Manzer Hussain Siddiqui · 2024 · Journal of soil science and plant nutrition
  46. Unlocking biological mechanisms with integrative functional genomics approaches
    Sehee Yun, Minsoo Noh, Jivin Yu, Hyeon-Jai Kim, Chi‐chung Hui, Hunsang Lee, Joe Eun Son · 2024 · Molecules and Cells
  47. Single-nucleus RNA sequencing reveals a preclinical model for the most common subtype of glioblastoma
    Laura García-Vicente, María Martínez-Fernández, Michael Borja, Vanessa Tran, Andrea Álvarez-Vázquez, Raquel Flores-Hernández, Yuxin Ding, Raúl González-Sánchez, Alejandro A. Granados, Aaron McGeever et al. · 2025 · Communications Biology
  48. Simplified, Shear Induced Generation of Double Emulsions for Robust Compartmentalization during Single Genome Analysis
    Thomas W. Cowell, Andrew Dobria, Hee‐Sun Han · 2022 · ACS Applied Materials & Interfaces
  49. Role of the histone methyltransferases Ezh2 and Suv4-20h1/Suv4-20h2 in neurogenesis
    Christopher T. Rhodes, Chin‐Hsing Annie Lin · 2022 · Neural Regeneration Research
  50. Current Status and Prospects of the Single-Cell Sequencing Technologies for Revealing the Pathogenesis of Pregnancy-Associated Disorders
    Dmitry D. Naydenov, Elena S. Vashukova, Yury A. Barbitoff, Yulia A. Nasykhova, Andrey Sergeyevich Glotov · 2023 · Genes
  51. High-Throughput Sequencing in Respiratory, Critical Care, and Sleep Medicine Research. An Official American Thoracic Society Workshop Report
    Craig P. Hersh, Ian Michael Adcock, Juan Carlos Celedon, Michael H. Cho, David C. Christiani, Blanca E. Himes, Naftali Kaminski, Rasika A. Mathias, Deborah A. Meyers, John F Quackenbush et al. · 2018 · Annals of the American Thoracic Society
  52. A Literature-Derived Knowledge Graph Augments the Interpretation of Single Cell RNA-seq Datasets
    Deeksha Doddahonnaiah, Patrick J. Lenehan, Travis K. Hughes, David Zemmour, Enrique Garcia-Rivera, AJ Venkatakrishnan, Ramakrishna Chilaka, Apoorv Khare, Akhil Kasaraneni, Abhinav Garg et al. · 2021 · Genes
  53. Single-Cell Sequencing Facilitates Elucidation of HIV Immunopathogenesis: A Review of Current Literature
    Silvère D. Zaongo, Vijay Harypursat, Yaokai Chen · 2022 · Frontiers in Immunology
  54. Modeling common and rare genetic risk factors of neuropsychiatric disorders in human induced pluripotent stem cells
    Abdurrahman W. Muhtaseb, Jubao Duan · 2022 · Schizophrenia Research
  55. Mapping Human Reproduction with Single-Cell Genomics
    Magda Marečková, Hassan Massalha, Valentina Lorenzi, Roser Vento‐Tormo · 2022 · Annual Review of Genomics and Human Genetics
  56. Data-driven identification of total RNA expression genes for estimation of RNA abundance in heterogeneous cell types highlighted in brain tissue
    Louise A. Huuki-Myers, Kelsey D. Montgomery, Sang‐Ho Kwon, Stephanie C. Page, Stephanie C. Hicks, Kristen R. Maynard, Leonardo Collado‐Torres · 2023 · Genome biology
  57. Integrative analysis of single cell genomics data by coupled nonnegative matrix factorizations
    Zhana Duren, Xi Xian Chen, Mahdi Zamanighomi · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  58. Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM
    Marcus Alvarez, Elior Rahmani, Brandon Jew et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  59. Single nucleus sequencing fails to detect microglial activation in human tissue
    N. Thrupp, Carlo Sala Frigerio, L. Wolfs, Nathan Skene, S. Poovathingal, Y. Fourne, Paul McMahan Matthews, Tom Theys, Renzo Mancuso, Bart De Strooper et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  60. Neuronal and glial 3D chromatin architecture illustrates cellular etiology of brain disorders
    Benxia Hu, Hyejung Won, Won Mah, Royce Park, Bibi S. Kassim, Keeley Spiess, Alexey Kozlenkov, Cheynna Crowley, Sirisha Pochareddy, Yun Li et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  61. The human brain vasculature shows a distinct expression pattern of SARS-CoV-2 entry factors
    Moheb Ghobrial, Jason Charish, Shigeki Takada, Taufik A. Valiante, Philippe Patrick Monnier, Ivan Radovanovic, Gary D. Bader, Thomas Wälchli · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  62. Developmental diversification of cortical inhibitory interneurons
    2017
  63. Longitudinal single-cell transcriptional dynamics throughout neurodegeneration in SCA1
    Leon Tejwani, Neal G. Ravindra, C. Lee, Yu-Bao Cheng, Billy Nguyen, Kimberly Luttik, Lu-Han Ni, Shupei Zhang, Logan M. Morrison, John Gionco et al. · 2021 · bioRxiv
  64. Comment on “Impact of neurodegenerative diseases on human adult hippocampal neurogenesis”
    Jon I. Arellano, Alvaro Duque, PASKO T. RAKIC · 2022 · Science
  65. Transcriptional Cartography Integrates Multiscale Biology of the Human Cortex
    Konrad Wagstyl, Sophie Adler, Jakob Seidlitz, Simon Vandekar, Travis T. Mallard, Richard Dear, Alex R. DeCasien, Theodore Daniel Satterthwaite, Siyuan Liu, Petra E. Vértes et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  66. Single-Cell Transcriptome Profiling
    Guy Shapira, Noam Shomron · 2021 · Methods in molecular biology
  67. Single-Cell RNA Sequencing of Retina:New Looks for Gene Marker and Old Diseases
    Peixi Ying, Chang Huang, Yan Wang, Guo Xi, Yuchen Cao, Yuxi Zhang, Fu Sheng, Lin Chen, Guoguo Yi, Min Fu · 2021 · Frontiers in Molecular Biosciences
  68. A method for rapid flow-cytometric isolation of endothelial nuclei and RNA from archived frozen brain tissue
    Amy L. Kimble, Jordan Silva, Omar M. Omar, Melissa D. Murphy, Jessica A. Hensel, Sarah-Anne E. Nicholas, Evan R. Jellison, Bo Reese, Patrick A. Murphy · 2021 · Laboratory Investigation
  69. Single-cell transcriptomes identifies characteristic features of mouse macrophages in liver Mallory-Denk bodies formation
    Rong Zhang, Bei Zhong, Jiashan He, Xinyu Yang, Menghua He, Wuyi Zeng, Jiayi Pan, Zixuan Fang, Jiangtao Jia, Hui Liu · 2022 · Experimental and Molecular Pathology
  70. Single-nucleus RNA velocity reveals critical synaptic and cell-cycle dysregulations in neuropathologically confirmed Alzheimer’s disease
    Quadri Adewale, Ahmed Faraz Khan, David Alan Bennett, Yasser Iturria‐Medina · 2024 · Scientific Reports
  71. Single-cell transcriptomics in planaria: new tools allow new insights into cellular and evolutionary features
    Helena García-Castro, Jordi Solana · 2022 · Biochemical Society Transactions
  72. Nuclei Isolation from Adult Mouse Kidney for Single-Nucleus RNA-Sequencing
    Janna Leiz, Christian Hinze, Anastasiya Boltengagen, Caroline Braeuning, Christine Kocks, Nikolaus Rajewsky, Kai Martin Schmidt-Ott · 2021 · Journal of Visualized Experiments
  73. Single-Cell Transcriptomic Analysis of Human Lung Reveals Complex Multicellular Changes During Pulmonary Fibrosis
    Paul A. Reyfman, James McCauley Walter, Nikita Joshi et al. · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  74. Valid post-clustering differential analysis for single-cell RNA-Seq
    Jesse M. Zhang, Govinda M. Kamath, David N. C. Tse · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  75. Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation
    Alan Selewa, Ryan Dohn, Heather Eckart et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  76. FIN-Seq: Transcriptional profiling of specific cell types in frozen archived tissue from the human central nervous system
    R. Amamoto, Emanuela Zuccaro, Nathan C. Curry, Sonia Khurana, Hsu-Hsin Chen, C. Cepko, P. Arlotta · 2019 · bioRxiv
  77. A single cell brain atlas in human Alzheimer’s disease
    Alexandra Grubman, Gabriel Chew, John F. Ouyang, Guizhi Sun, Xin Yi Choo, Catriona McLean, Rebecca K. Simmons, Sam Buckberry, Dulce B. Vargas-Landín, Jahnvi Pflueger et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  78. Autoencoder-based cluster ensembles for single-cell RNA-seq data analysis
    Thomas A. Geddes, Tai-Yun Kim, Lihao Nan · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  79. Prokaryotic Single-Cell RNA Sequencing by In Situ Combinatorial Indexing
    Sydney B. Blattman, Wenyan Jiang, Panos Oikonomou · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  80. The architecture of brain co-expression reveals the brain-wide basis of disease susceptibility
    Christopher Hartl, Gokul Ramaswami, William G. Pembroke, Sandrine Muller, Greta Pintacuda, Ashis Saha, Princy Parsana, Alexis J. Battle, Kasper Lage, Daniel H. Geschwind · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  81. Sfaira accelerates data and model reuse in single cell genomics
    David S. Fischer, Leander Dony, Martin F. König · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  82. Association of a Common Genetic Variant with Parkinson’s Disease is Propagated through Microglia
    Rebekah G. Langston, Alexandra G. Beilina, Xylena Reed · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  83. Enrichment of Glial Cells From Human Post-mortem Tissue for Transcriptome and Proteome Analysis Using Immunopanning
    Anna Nölle, Irene van Dijken, Ciril M. Waelti, Daniela Calini, Julien Bryois, Emmanuelle Lezan, Sabrina Golling, Angélique Augustin, Lynette C. Foo, Jeroen J.M. Hoozemans · 2021 · Frontiers in Cellular Neuroscience
  84. Multi-omic single cell sequencing: Overview and opportunities for kidney disease therapeutic development
    Steven K Pregizer, Thom Vreven, Mohit Mathur, Luke N. Robinson · 2023 · Frontiers in Molecular Biosciences
  85. A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation
    Christina Steyn, Ruvimbo D Mishi, Stephanie Fillmore, Matthijs B Verhoog, Jessica More, Ursula Karin Rohlwink, Roger Melvill, James Thomas Butler, Nico Enslin, Muazzam Jacobs et al. · 2024 · Nature Genetics
  86. Informing disease modelling with brain-relevant functional genomic annotations
    Regina Hertfelder Reynolds, John Hardy, Mina Ryten, Sarah A. Gagliano Taliun · 2019 · Brain
  87. Neurofilament light-associated connectivity in young-adult Huntington’s disease is related to neuronal genes
    Peter McColgan, Sarah Gregory, Paul Zeun, Angeliki Zarkali, Eileanoir B. Johnson, Christopher S Parker, Kate Fayer, Jessica Lowe, Akshay Nair, Carlos Estevez‐Fraga et al. · 2022 · Brain
  88. Genome-wide association study of cerebellar white matter microstructure and genetic overlap with common brain disorders
    Bang‐Sheng Wu, Yi‐Jun Ge, Wei Zhang, Shi-Dong Chen, Shitong Xiang, Ya-Ru Zhang, Ya‐Nan Ou, Yuchao Jiang, Lan Tan, Wei Cheng et al. · 2023 · NeuroImage
  89. Oligonucleotide Probe for Transcriptome in Vivo Analysis (TIVA) of Single Neurons with Minimal Background
    Sean B. Yeldell, Linlin Yang, Jaehee Lee, James H. Eberwine, Ivan J. Dmochowski · 2020 · ACS Chemical Biology
  90. Molecular characterization of the stress network in individuals at risk for schizophrenia
    Mandy Meijer, Arlin Keo, Judith M. C. van Leeuwen, Oleh Dzyubachyk, Onno Cornelis Meijer, Christiaan H. Vinkers, Ahmed Essam Mahfouz · 2021 · Neurobiology of Stress
  91. Temporal single-cell regeneration studies: the greatest thing since sliced pancreas?
    Juan Domínguez‐Bendala, Mirza Muhammad Fahd Qadir, Ricardo Luis Pastori · 2021 · Trends in Endocrinology and Metabolism
  92. Profiling cell-type specific gene expression in post-mortem human brain samples through laser capture microdissection
    Daniel Medeiros Almeida, Gustavo Turecki · 2022 · Methods
  93. Neural cell isolation from adult macaques for high-throughput analyses and neurosphere cultures
    Jia-Ru Wei, Dongchang Xiao, Lei Tang, Nana Xu, Ruifeng Liu, Yuhui Shen, Zihui Xu, Xuan Sang, Jian Ge, Mengqing Xiang et al. · 2023 · Nature Protocols
  94. Applications of single‐cell sequencing for the field of otolaryngology: A contemporary review
    Madeline P. Pyle, Michael Hoa · 2020 · Laryngoscope Investigative Otolaryngology
  95. Single-cell transcriptomics of the aged mouse brain reveals convergent, divergent and unique aging signatures
    Methodios Ximerakis, Scott Lipnick, Sean Simmons et al. · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  96. Mouse and human microglial phenotypes in Alzheimer’s disease are controlled by amyloid plaque phagocytosis through Hif1α
    Grubman, Alexandra, Choo, Xin Yi, Chew, Gabriel, Ouyang, John F., Sun, Guizhi, Croft, Nathan P., Rossello, Fernando J., Simmons, Rebecca, Buckberry, Sam, Landin, Dulce Vargas et al. · 2019
  97. Parallel RNA and DNA analysis after Deep-sequencing (PRDD-seq) reveals cell type specific lineage patterns in human brain
    August Yue Huang, Pengpeng Li, Rachel E. Rodin et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  98. Genetic analysis of amyotrophic lateral sclerosis identifies contributing pathways and cell types
    Sara Sáez-Atiénzar, Sara Bandrés Ciga, Rebekah G. Langston et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  99. Child abuse associates with increased recruitment of perineuronal nets in the ventromedial prefrontal cortex: a possible implication of oligodendrocyte progenitor cells
    2020
  100. Brain atrophy progression in Parkinson’s disease is shaped by connectivity and local vulnerability
    Christina Tremblay, Shady Rahayel, Andrew Vo · 2021 · medRxiv