Massively parallel single-nucleus RNA-seq with DroNc-seq

Habib, Naomi, Avraham-Davidi, Inbal, Basu, Anindita, Burks, Tyler, Shekhar, Karthik, Hofree, Matan, Choudhury, Sourav R, Aguet, François +6 more·2017·Nature Methods

Cited by (1,000)

Items 701–800 of 1,000

  1. Characterizing dysregulations via cell-cell communications in Alzheimer’s brains using single-cell transcriptomes
    Che-Yu Lee, Dylan Riffle, Yifeng Xiong · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  2. stGCL: A versatile cross-modality fusion method based on multi-modal graph contrastive learning for spatial transcriptomics
    Na Yu, Daoliang Zhang, Wei Zhang et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  3. Optimized nucleus isolation protocol from frozen mouse tissues for single nucleus RNA sequencing application
    Marie-Albane Minati, Angeline Fages, Nicolas Dauguet · 2023 · Frontiers in Cell and Developmental Biology
  4. Multimodal interrogation of ventral pallidum projections reveals projection-specific signatures and effects on cocaine reward
    Nimrod Bernat, Rianne R. Campbell, Hyungwoo Nam, Mahashweta Basu, Tal Odesser, Gal Elyasaf, Michel Engeln, Ramesh Chandra, Shana Golden, Seth A. Ament et al. · 2024 · Journal of Neuroscience
  5. White matter hyperintensity genetic risk factor <scp> <i>TRIM47</i> </scp> regulates autophagy in brain endothelial cells
    Yeung, Sunny Hoi‐Sang, Lee, Ralph Hon‐Sun, Cheng, Gerald Wai‐Yeung, Ma, Iris Wai‐Ting, Kofler, Julia, Kent, Candice, Ma, Fulin, Herrup, Karl, Fornage, Myriam, Arai, Ken et al. · 2024 · The FASEB Journal
  6. A single-cell, long-read, isoform-resolved case-control study of FTD reveals cell-type-specific and broad splicing dysregulation in human brain
    Natan Belchikov, Wen Hu, Li Fan, Anoushka Joglekar, Yi He, Careen Foord, Julien Jarroux, Justine Hsu, Shaun Pollard, Sadaf Amin et al. · 2025 · Cell Reports
  7. Reactive oligodendrocytes promote glioblastoma progression through CCL5/CCR5-mediated glioma stem cell maintenance
    Nicholas Mikolajewicz, Kui Zhai, Anish Puri, Petar Miletic, Nazanin Tatari, Jiarun Wei, Neil J. Savage, Zhi liang Huang, Qian Huang, Seon Yong Lee et al. · 2026 · Neuron
  8. Systems biology of embryonic development: Prospects for a complete understanding of the Caenorhabditis elegans embryo
    John I. Murray · 2018 · Wiley Interdisciplinary Reviews Developmental Biology
  9. Big data and single‐cell sequencing in acute myeloid leukemia research
    Yuxuan Zou, Huiyuan Zhang, Hongbo Hu · 2023 · MedComm – Oncology
  10. Well-Paired-Seq2: High-Throughput and High-Sensitivity Strategy for Characterizing Low RNA-Content Cell/Nucleus Transcriptomes
    Kun Yin, Meijuan Zhao, Yiling Xu, Zhong Zheng, Shanqing Huang, Dianyi Liang, He Dong, Ye Guo, Li Lin, Jia Tao Song et al. · 2024 · Analytical Chemistry
  11. Transcriptomic Crosstalk between Gliomas and Telencephalic Neural Stem and Progenitor Cells for Defining Heterogeneity and Targeted Signaling Pathways
    Roxana Deleanu, Laura Cristina Ceafalan, Anica Dricu · 2021 · International Journal of Molecular Sciences
  12. Single-cell sequencing leads a new era of profiling transcriptomic landscape
    Huidan Zhang, Naiwen Cui, Yamei Cai, Fengyang Lei, David A. Weitz · 2018 · Journal of Bio-X Research
  13. Single-cell analysis of cytoskeleton dynamics: From isoelectric focusing to live cell imaging and RNA-seq
    Illana Gozes, Yanina Ivashko‐Pachima, Oxana Kapitansky, Carmen Laura Sayas, Tal Iram · 2019 · Journal of Neuroscience Methods
  14. Molecular signatures of cognition and affect
    Justine Y. Hansen, Ross D. Markello, Jacob W. Vogel, Jakob Seidlitz, Danilo Bzdok, Bratislav Mišić · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  15. SM-Omics: An automated platform for high-throughput spatial multi-omics
    Sanja Vicković, Britta Lötstedt, Johanna Klughammer · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  16. Transcriptional and cellular signatures of cortical morphometric similarity remodelling in chronic pain
    Daniel Martins, Ottavia Dipasquale, Mattia Veronese · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  17. Trans-ethnic eQTL meta-analysis of human brain reveals regulatory architecture and candidate causal variants for brain-related traits
    2021
  18. Transient and delay chemical master equations
    Gennady Gorin, Shawn Yoshida, L. Pachter · 2022 · bioRxiv
  19. A tissue centric atlas of cell type transcriptome enrichment signatures
    Philip Dusart, Sofia Öling, Eike C. Struck, Marthe Norreen-Thorsen, Martin Zwahlen, Kalle von Feilitzen, Per Oksvold, Martina Bosić, MJ Iglesias, Thomas Renné et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  20. Integrative single-cell transcriptomics clarifies adult neurogenesis and macroglia evolution
    David Morizet, Isabelle Foucher, Alessandro Alunni, Laure Bally‐Cuif · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  21. Lesion-remote astrocytes govern microglia-mediated white matter repair
    Sarah E. McCallum, Keshav B. Suresh, Timothy Islam et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  22. High-Complexity Barcoded Rabies Virus for Scalable Circuit Mapping Using Single-Cell and Single-Nucleus Sequencing
    David Shin, Madeleine E. Urbanek, H. Hanh Larson, Anthony J. Moussa, Kevin Y. Lee, Donovan L Baker, Elio Standen-Bloom, Sangeetha Ramachandran, Derek Bogdanoff, Cathryn René Cadwell et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  23. Sample Collection Methods in Upper Gastrointestinal Research
    Hyo‐Joon Yang, Seung In Seo, Jin Lee, Cheal Wung Huh, Joon Sung Kim, Jun Chul Park, Hyunki Kim, Hakdong Shin, Cheol Min Shin, Chan Hyuk Park et al. · 2023 · Journal of Korean Medical Science
  24. Characterizing the distinct imaging phenotypes, clinical behavior, and genetic vulnerability of brain maturational subtypes in mood disorders
    Junjie Zheng, Xiaofen Zong, Lili Tang, Huiling Guo, Pengfei Zhao, Fay Y. Womer, Xizhe Zhang, Yanqing Tang, Fei Wang · 2024 · Psychological Medicine
  25. The evolution of gene regulation in mammalian cerebellum development
    Ioannis Sarropoulos, Mari Sepp, Tetsuya Yamada, P. Schäfer, Nils Trost, Julia Schmidt, Céline Schneider, C. Drummer, Sophie Mißbach, I. I. Taskiran et al. · 2026 · Science
  26. Improved protocol for single-nucleus RNA-sequencing of frozen human bladder tumor biopsies
    Sofie S. Schmøkel, Iver Nordentoft, Sia V. Lindskrog, Philippe Lamy, Michael Knudsen, Jørgen Bjerggaard Jensen, Lars Dyrskjøt · 2023 · Nucleus
  27. Ambient RNAs removal of cortex-specific snRNA-seq reveals Apoe+ microglia/macrophage after deeper cerebral hypoperfusion in mice
    Zhang, Yuan, Tan, Jinyun, Yang, Kai, Fan, Weijian, Yu, Bo, Shi, Weihao · 2023 · Journal of Neuroinflammation
  28. Single Cell Sequencing Technology and Its Application in Alzheimer’s Disease
    Yuru Han, Congying Huang, Yuhui Pan, Xuefeng Gu · 2024 · Journal of Alzheimer s Disease
  29. sNucConv: A bulk RNA-seq deconvolution method trained on single-nucleus RNA-seq data to estimate cell-type composition of human adipose tissues
    Gil Sorek, Yulia Haim, Vered Chalifa Caspi, Or Lazarescu, Maya Ziv, Tobias Hagemann, Pamela A. Nono Nankam, Matthias Blüher, Idit F. Liberty, Oleg Dukhno et al. · 2024 · iScience
  30. Single-nucleus transcriptomic analysis reveals the regulatory circuitry of myofiber XBP1 during regenerative myogenesis
    Aniket S. Joshi, Micah B. Castillo, Meiricris Tomaz da Silva, Anh Tuan Vuong, Preethi H. Gunaratne, Radbod Darabi, Yu Liu, Ashok Kumar · 2024 · iScience
  31. Single-cell RNA Sequencing: In-depth Decoding of Heart Biology and Cardiovascular Diseases
    Zhongli Chen, Wei Liang, Fırat Duru, Liang Chen · 2020 · Current Genomics
  32. Cell-type-specific genes associated with cortical structural abnormalities in pediatric bipolar disorder
    Wenkun Lei, Qian Xiao, Chun Wang, Weijia Gao, Yiwen Xiao, Yingliang Dai, Guangming Lu, Linyan Su, Yuan Zhong · 2022 · Psychoradiology
  33. Molecular profiling in desmoplastic small round cell tumours
    Yuen Bun Tam, Robin L. Jones, Paul H. Huang · 2023 · The International Journal of Biochemistry & Cell Biology
  34. Identification of brain cell types underlying genetic association with word reading and correlated traits
    Kaitlyn M. Price, Karen G. Wigg, Anukrati Nigam, Yu Feng, Kirsten Blokland, Margaret Wilkinson, Elizabeth Nellis Kerr, Sharon Guger, Maureen W. Lovett, Lisa J. Strug et al. · 2023 · Molecular Psychiatry
  35. Glyoxal as an alternative fixative for single-cell RNA sequencing
    Josephine Bageritz, Niklas Krausse, Schayan Yousefian, Svenja Leible, Erica Valentini, Michael Boutros · 2023 · G3 Genes Genomes Genetics
  36. Selective Vulnerability to Neurodegenerative Disease: Insights from Cell Type-Specific Translatome Studies
    Walker S. Jackson, Susanne Bauer, Lech Kaczmarczyk, Srivathsa Subramanya Magadi · 2024 · Biology
  37. bigSCale: An Analytical Framework for Big-Scale Single-Cell Data
    Giovanni Iacono, Elisabetta Mereu, Amy Guillaumet-Adkins · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  38. Massively parallel, time-resolved single-cell RNA sequencing with scNT-Seq
    Qi Qiu, Peng Hu, Kiya W. Govek · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  39. Strategies for cellular deconvolution in human brain RNA sequencing data
    Olukayode Ayodeji Sosina, Matthew Nguyen Tran, Kristen R. Maynard et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  40. Exercise promotes satellite cell contribution to myofibers in a load-dependent manner
    Evi Masschelein, Gommaar D’Hulst, Joel Zvick · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  41. ABACUS: A flexible UMI counter that leverages intronic reads for single-nucleus RNAseq analysis
    Hualin Simon Xi, Lauren Gibilisco, Markus P. Kummer, Knut Biber, Astrid Wachter, Maya E. Woodbury · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  42. Disrupted microglial iron homeostasis in progressive multiple sclerosis
    Jonathan D. Proto, Mindy Zhang, Sean K. Ryan, Xinting Yao, Yinyin Huang, Yi-Chien Chang, Michael R. Dufault, Emilie Christie, Anthony Chomyka, Jackie Saleh et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  43. Differences in molecular sampling and data processing explain variation among single-cell and single-nucleus RNA-seq experiments
    John T. Chamberlin, Younghee Lee, Gábor Marth · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  44. Neurophysiological signatures of cortical micro-architecture
    Golia Shafiei, Ben Fulcher, Bradley Voytek · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  45. Alzheimer’s disease-linked risk alleles elevate microglial cGAS-associated senescence and neurodegeneration in a tauopathy model
    Gillian Carling, Li Fan, Nessa R. Foxe et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  46. Consensus meta-analysis of genome-wide association studies for Alzheimer’s disease and related dementias
    EADB, Bellenguez, Céline, Castillo Morales, Atahualpa, Amin, Najaf, van der Lee, Sven J., Muntaner, Manon, Parveen, Kayenat, Küçükali, Fahri, Grenier-Boley, Benjamin, Heikkinen, Sami et al. · 2026 · Nature Genetics
  47. Transcriptional signatures of cortical structural changes in chronic insomnia disorder
    Liyong Yu, Daijie Hu, Yucai Luo, Wenting Lin, Hao Xu, Xiangwen Xiao, Zihao Xia, Zeyang Dou, Guangli Zhao, Lu Yang et al. · 2024 · Psychophysiology
  48. Human adult hippocampal neurogenesis in health and disease
    M C Alonso-Moreno, Marta Gallardo‐Caballero, A V Prádanos-Senén, Marı́a Llorens-Martı́n · 2025 · Aging Brain
  49. Heterogeneous, temporally consistent, and plastic brain development after preterm birth
    Melissa Thalhammer, Jakob Seidlitz, Antonia Neubauer, Aurore Menegaux, Benita Schmitz‐Koep, Maria Angelique Di Biase, Julia Schulz, Lena Dorfschmidt, Richard A. I. Bethlehem, Aaron F. Alexander‐Bloch et al. · 2025 · Nature Communications
  50. Stereo‐cell: A planar DNA nanoball‐array route to ultrahigh‐throughput, imaging‐integrated single‐cell profiling
    Chao Wang, Miao Huang, Junxia Han, Mingyuan Sun, Haijun Li, Yu Zhang, Hong Liu, Lin Ge Han · 2025 · BMEMat
  51. Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell sequencing data
    Gennady Gorin, Tara Chari, Maria Carilli, John J. Vastola, Lior S. Pachter · 2025 · Nature Methods
  52. Leveraging single‐cell RNA‐seq for uncovering naïve B cells associated with better prognosis of hepatocellular carcinoma
    Qingjia Sun, Rui Gao, Yingxin Lin, Xianchao Zhou, Tao Wang, Jian He · 2024 · MedComm
  53. Single-cell RNA sequencing: An overview for the ophthalmologist
    Elizabeth J. Rossin, Lucia Sobrin, Leo A. Kim · 2021 · Seminars in Ophthalmology
  54. SCSit: A high-efficiency preprocessing tool for single-cell sequencing data from SPLiT-seq
    Meiwei Luan, Jia-Lun Lin, Ye-Fan Wang, Yu-Xiao Liu, Chuan‐Le Xiao, Rongling Wu, Shuang Xie · 2021 · Computational and Structural Biotechnology Journal
  55. Chromatin structure predicts survival in glioma patients
    Matthew C. Garrett, Rebecca Albano, Troy Carnwath, Sanjit Shah, Daniel Woo, Michael A. S. Lamba, David R. Plas, Aditi Paranjpe, Krishna M. Roskin, Chuntao Zhao et al. · 2022 · Scientific Reports
  56. Combination of single-nucleus and bulk RNA-seq reveals the molecular mechanism of thalamus haemorrhage-induced central poststroke pain
    Tianfeng Huang, Yinggang Xiao, Yang Zhang, Yali Ge, Ju Gao · 2023 · Frontiers in Immunology
  57. Model-based evaluation of spatiotemporal data reduction methods with unknown ground truth through optimal visualization and interpretability metrics
    Komlan Atitey, Alison A. Motsinger‐Reif, Benedict Anchang · 2023 · Briefings in Bioinformatics
  58. Single-Nuclei Characterization of Lacrimal Gland in Scopolamine-Induced Dry Eye Disease
    Yang Tang, Shengqian Dou, Chao Wei · 2024 · Investigative Ophthalmology & Visual Science
  59. Fine-grained cell-type specific association studies with human bulk brain data using a large single-nucleus RNA sequencing based reference panel
    Edwin J. C. G. van den Oord, Karolina A. Åberg · 2023 · Scientific Reports
  60. Sequencing the Human Brain at Single-Cell Resolution
    Malosree Maitra, Corina Nagy, Gustavo Turecki · 2019 · Current Behavioral Neuroscience Reports
  61. Epigenomic convergence of genetic and immune risk factors in neurodevelopmental disorder cortex
    Vogel Ciernia A., Laufer B.I., Dunaway K.W., Hwang H., Mordaunt C.E., Rochelle L. Coulson, Yasui D.H., Janine M. LaSalle · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  62. Cortical remodelling in childhood is associated with genes enriched for neurodevelopmental disorders
    Gareth Ball, Jakob Seidlitz, Richard J Beare · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  63. Single cell transcriptome profiling of the human alcohol-dependent brain
    Eric A. Brenner, Gayatri R. Tiwari, Yunlong Liu · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  64. A literature-derived knowledge graph augments the interpretation of single cell RNA-seq datasets
    Deeksha Doddahonnaiah, Patrick J. Lenehan, Travis Hughes et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  65. Single-nucleus transcriptomic atlas of spinal cord neuron in human
    Donghang Zhang, Yiyong Wei, Jin Liu, Hongjun Chen, Jin Li, Tao Zhu, Cheng Zhou · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  66. Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types
    2022
  67. A Risk-reward Examination of Sample Multiplexing Reagents for Single Cell RNA-Seq
    Daniel V. Brown, Casey J. A. Anttila, Ling Ling et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  68. A spatially-resolved transcriptional atlas of the murine dorsal pons at single-cell resolution
    Stefano Nardone, Roberto De Luca, Antonino Zito et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  69. Cell type transcriptomics reveal shared genetic mechanisms in Alzheimer’s and Parkinson’s disease
    Anwesha Bhattacharya, Edward A. Fon, Alain Dagher, Yasser Iturria‐Medina, Jo Anne Stratton, Chloé Savignac, Jack Stanley, L. M. Hodgson, Badr Ait Hammou, David A. Bennett et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  70. Spatiotemporal Analysis of Remyelination Reveals a Concerted Interferon-Responsive Glial State That Coordinates Immune Infiltration
    Michael-John Dolan, Raphael Rakosi-Schmidt, Eric Garcia, Yuesang Lin, Naeem M. Nadaf, Jessica Dixon, Shiran Guo, Nader Morshed, Constanze Depp, Jordan L. Doman et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  71. Survey of transcriptome analyses of hippocampal neurogenesis with focus on adult dentate gyrus stem cells
    Laura Micheli, Maurizia Caruso, Giorgio D’Andrea, Daniel Volpe, Manuela Ceccarelli, Felice Tirone · 2025 · Frontiers in Cell and Developmental Biology
  72. Ingenious integration of synthetic biology and droplet microfluidics
    Panrui Zhang, Haoyu Wu, Runxin Zhang, Danshan Zhao, Wei Wei, Qiaoyi Yang, Zhe Wang, Tian‐Qiong Shi, Yuetong Wang · 2025 · Chemical Engineering Journal
  73. Effects of Shared and Nonshared Schizophrenia and Bipolar Disorder Alleles on Cognition and Educational Attainment in the UK Biobank
    Alexander L. Richards, Eilidh Fenner, Nicholas E. Clifton, Darren Cameron, Claire E. Tume, Nicholas J. Bray, Sophie E. Legge, James Walters, Peter Holmans, Michael C. O’Donovan et al. · 2025 · Biological Psychiatry Global Open Science
  74. DAP12 deletion reduces neuronal SLIT2 and demyelination and enhances brain resilience in female tauopathy mice
    Hao Chen, Li Fan, Qi Guo, Man Ying Wong, Jingjie Zhu, Nessa R. Foxe, Winston T. Wang, Aviram Nessim, Gillian Carling, Bangyan Liu et al. · 2025 · Molecular Neurodegeneration
  75. Five energy metabolism pathways show distinct regional distributions and lifespan trajectories in the human brain
    Moohebat Pourmajidian, Justine Y. Hansen, Golia Shafiei, Bratislav Mišić, Alain Dagher · 2026 · PLoS Biology
  76. Single-cell transcriptomics in thyroid eye disease
    Sofia Ahsanuddin, Albert Y. Wu · 2023 · Taiwan Journal of Ophthalmology
  77. Zi Shen Wan Fang repaired blood–brain barrier integrity in diabetic cognitive impairment mice via preventing cerebrovascular cells senescence
    Qingsheng Yin, Genhui Yang, Runtao Su, Jie Bu, Ying Li, Han Zhang, Yanjun Zhang, Pengwei Zhuang · 2024 · Chinese Medicine
  78. A simplified preparation method for single-nucleus RNA-sequencing using long-term frozen brain tumor tissues
    Kati Ernst, Konstantin Okonechnikov, Josephine Bageritz, Ashwyn A Perera, Jan‐Philipp Mallm, Andrea Wittmann, Kendra K. Maaß, Svenja Leible, Michael Boutros, Stefan Michael Pfister et al. · 2025 · Scientific Reports
  79. Simultaneous quantitative assessment of two distinct cell lineages with a nuclear-localized dual genetic reporter
    Muxue Tang, Kuo Liu, Hengwei Jin, Yan Li, Shaohua Zhang, Xiuxiu Liu, Ximeng Han, Maoying Han, Zhenqian Zhang, Bin Zhou · 2020 · Journal of Molecular and Cellular Cardiology
  80. Applications of single‐cell multi‐omics sequencing in deep understanding of brain diseases
    Xu Zhang, Ping Lü, Xiaorong Shen · 2022 · Clinical and Translational Discovery
  81. Time-resolved single-cell RNA-seq using metabolic RNA labelling
    2022 · Nature Reviews Methods Primers
  82. Application of computational algorithms for single-cell RNA-seq and ATAC-seq in neurodegenerative diseases
    H. K. Choi, Hyeonkyu Kim, Hoebin Chung, Dong-Sung Lee, Junil Kim · 2024 · Briefings in Functional Genomics
  83. QClus: a droplet filtering algorithm for enhanced snRNA-seq data quality in challenging samples
    Eloi Schmauch, Johannes Ojanen, Kyriaki Galani, Juho M. Jalkanen, Kristiina Harju, Maija Hollmén, Hannu J. Kokki, Jarmo M. Gunn, Jari Halonen, Juha E.K. Hartikainen et al. · 2024 · Nucleic Acids Research
  84. Methodological considerations for the enrichment of bone marrow endothelial and mesenchymal stromal cells
    Evan L. Dray, Carey G. Ousley, Daniel B. McKim · 2021 · Molecular Immunology
  85. Ex uno, plures–From One Tissue to Many Cells: A Review of Single-Cell Transcriptomics in Cardiovascular Biology
    Elvira Forte, Micheal A. McLellan, Daniel A. Skelly, Nadia A Rosenthal · 2021 · International Journal of Molecular Sciences
  86. Isolation of Nuclei from Human Snap-frozen Liver Tissue for Single-nucleus RNA Sequencing
    Marcus Alvarez, Jihane N. Benhammou, Shuyun Rao, Lopa Mishra, Joseph R. Pisegna, Päivi Pajukanta · 2023 · BIO-PROTOCOL
  87. Transcriptional Regulation of Cortical Interneuron Development
    Emily Ling-Lin Pai, Daniel L. Vogt, Jia Sheng Hu, John L.R. Rubenstein · 2024 · Oxford University Press eBooks
  88. An 80,000-Piece Puzzle of Alzheimer’s Disease
    Tal Iram, Andreas Keller, Tony Wyss‐Coray · 2019 · Immunity
  89. Ancestry and frequency of genetic variants in the general population are confounders in the characterization of germline variants linked to cancer
    Anna Bobyn, Mehdi Zarrei, Yuankun Zhu, Mary Hoffman, Darren R. Brenner, Adam Cain Resnick, Stephen W. Scherer, Marco Gallo · 2020 · BMC Medical Genetics
  90. Single Cell Sequencing: A New Dimension in Cancer Diagnosis and Treatment
    Fengying Wu, Jue Fan, Jingwen Fang, Priya S. Dalvi, Margarete Odenthal, Nan Fang · 2020 · Advances in experimental medicine and biology
  91. Combined aptamer and transcriptome sequencing of single cells
    Cyrille L. Delley, Leqian Liu, Maen F. Sarhan · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  92. Exome sequencing of 457 autism families recruited online provides evidence for novel ASD genes
    Pamela Feliciano, Pamela Feliciano, Xueya Zhou et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  93. Integrative genomics approach identifies conserved transcriptomic networks in Alzheimer’s disease
    Samuel Morabito, Emily Miyoshi, Neethu Michael · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  94. Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis
    Sunny Z. Wu, Daniel Lee Roden, Ghamdan Al‐Eryani et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  95. Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila
    Colleen N. McLaughlin, Maria Brbić, Qijing Xie et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  96. Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq
    Viacheslav Mylka, Jeroen Aerts, Irina Matetovici et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  97. Molecular characterization of projection neuron subtypes in the mouse olfactory bulb
    Sara Zeppilli, Tobias Ackels, Robin Attey · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  98. The transcription factor EGR2 is indispensable for tissue-specific imprinting of alveolar macrophages in health and tissue repair
    Jack McCowan, Phoebe M. Kirkwood, Frédéric Fercoq et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  99. CellDART: Cell type inference by domain adaptation of single-cell and spatial transcriptomic data
    Sungwoo Bae, Kwon Joong Na, Jaemoon Koh · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  100. Profiling DNA break sites and transcriptional changes in response to contextual fear learning
    Ryan T. Stott, Oleg Kritsky, Li‐Huei Tsai · 2021 · bioRxiv (Cold Spring Harbor Laboratory)