Vertebrate neurogenesis is counteracted by Sox1–3 activity

Multipotent cell lineages in early mouse development depend on SOX2 functionPreprint

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NeuN, a neuronal specific nuclear protein in vertebratesxs

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Proneural genes and the specification of neural cell types

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Topographic organization of embryonic motor neurons defined by expression of LIM homeobox genes

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PCNA: structure, functions and interactions

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From head to toes: the multiple facets of Sox proteins

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Identification of neurogenin, a vertebrate neuronal determination gene.

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Developmental-specific activity of the FGF-4 enhancer requires the synergistic action of Sox2 and Oct-3.Preprint

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Pairing SOX off: with partners in the regulation of embryonic development

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Sox2 -Deficient Müller Glia Disrupt the Structural and Functional Maturation of the Mammalian Retina

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Prenatal alcohol exposure alters expression of neurogenesis-related genes in an ex vivo cell culture model

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RAE‐1 is expressed in the adult subventricular zone and controls cell proliferation of neurospheres

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Sox2 is dispensable for primary melanoma and metastasis formation

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Lamin A/C Haploinsufficiency Modulates the Differentiation Potential of Mouse Embryonic Stem Cells

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SOX 12: a novel potential target for acute myeloid leukaemia

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Molecular Mechanisms Regulating Impaired Neurogenesis of Fragile X Syndrome Human Embryonic Stem Cells

Telias, M., Mayshar, Y., Amit, A., & Ben‐Yosef, D. (2015) · Stem Cells and Development · doi:10.1089/scd.2015.0220 · Cited by 35

Overexpression of Sox3 is Associated with Diminished Prognosis in Esophageal Squamous Cell Carcinoma

Li, K., Wang, R., Jiang, Y., Zou, Y.-B., & Guo, W. (2012) · Annals of Surgical Oncology · doi:10.1245/s10434-012-2792-6 · Cited by 32

The transcription factor sry‐related HMG box‐4 (SOX4) is required for normal renal development in vivo

Huang, J., Arsenault, M. G., Kann, M., Lopez‐Mendez, C., Saleh, M. C., Wadowska, D. W., Taglienti, M. E., Ho, J., Miao, Y., Sims, D., et al. (2013) · Developmental Dynamics · doi:10.1002/dvdy.23971 · Cited by 34

A flexible genetic toolkit for arthropod neurogenesis

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Inhibitory Smads differentially regulate cell fate specification and axon dynamics in the dorsal spinal cord

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Congenital Hydrocephalus and Abnormal Subcommissural Organ Development in Sox3 Transgenic Mice

Lee, K., Tan, J., Morris, M. B., Rizzoti, K., Hughes, J., Cheah, P.-S., Felquer, F. A., Liu, X., Piltz, S., Lovell-Badge, R. H., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0029041 · Cited by 32

Morphogenesis and cytodifferentiation of the avian retinal pigmented epithelium require downregulation of Group B1 Sox genes

Ishíi, Y., Weinberg, K., Oda‐Ishii, I., Coughlin, L. A., & Mikawa, T. (2009) · Development · doi:10.1242/dev.031344 · Cited by 32

Dnajb8, a Member of the Heat Shock Protein 40 Family Has a Role in the Tumor Initiation and Resistance to Docetaxel but Is Dispensable for Stress Response

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SOX13 Exhibits a Distinct Spatial and Temporal Expression Pattern During Chondrogenesis, Neurogenesis, and Limb Development

Wang, Y., Ristevski, S., & Harley, V. R. (2006) · Journal of Histochemistry & Cytochemistry · doi:10.1369/jhc.6a6923.2006 · Cited by 32

Functional Equivalence of the SOX2 and SOX3 Transcription Factors in the Developing Mouse Brain and Testes

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Electroacupuncture Improves Neurobehavioral Function Through Targeting of SOX2-Mediated Axonal Regeneration by MicroRNA-132 After Ischemic Stroke

Zhao, X., Bai, F., Zhang, E., Zhou, D., Jiang, T., Zhou, H., & Wang, Q. (2018) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2018.00471 · Cited by 31

Zinc Finger Protein 191 (ZNF191/Zfp191) Is Necessary to Maintain Neural Cells As Cycling Progenitors

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Genetic and epigenetic effects in sex determination

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Calcium dynamics at the neural cell primary cilium regulate Hedgehog signaling–dependent neurogenesis in the embryonic neural tube

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Dynamic gene expression profiles during arm regeneration in the brittle star Amphiura filiformis

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Mechanisms of Cortical Differentiation

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Adult stem cells in the knifefish cerebellum

Sîrbulescu, R. F., Ilieş, I., Vitalo, A. G., Trull, K., Zhu, J., Traniello, I. M., & Zupanc, G. K. H. (2014) · Developmental Neurobiology · doi:10.1002/dneu.22210 · Cited by 29

Identification of Highly Conserved Putative Developmental Enhancers Bound by SOX3 in Neural Progenitors Using ChIP-Seq

McAninch, D., & Thomas, P. Q. (2014) · PLoS ONE · doi:10.1371/journal.pone.0113361 · Cited by 29

The role of Dichaete in transcriptional regulation during Drosophila embryonic development

Aleksic, J., Ferrero, E. A., Fischer, B., Shen, S. P., & Russell, S. R. H. (2013) · BMC Genomics · doi:10.1186/1471-2164-14-861 · Cited by 28

Transcriptional Regulation and Specification of Neural Stem Cells

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A cellular and molecular analysis of SoxB-driven neurogenesis in a cnidarian

Chrysostomou, E., Flici, H., Gornik, S. G., Salinas‐Saavedra, M., Gahan, J. M., McMahon, E. T., Thompson, K., Hanley, S. A., Kilcoyne, M., Schnitzler, C. E., et al. (2022) · eLife · doi:10.7554/elife.78793 · Cited by 29

Crucial First Steps: The Transcriptional Control of Neuron Delamination

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Differentiation of Chromaffin Progenitor Cells to Dopaminergic Neurons

Vukićević, V., Schmid, J., Hermann, A., Lange, S., Qin, N., Gebauer, L., Chung, K.-F., Ravens, U., Eisenhofer, G., Storch, A., et al. (2012) · Cell Transplantation · doi:10.3727/096368912x638874 · Cited by 29

Gene regulatory networks in neural cell fate acquisition from genome-wide chromatin association of Geminin and Zic1

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The expression and function of MTG/ETO family proteins during neurogenesis

Koyano‐Nakagawa, N., & Kintner, C. R. (2004) · Developmental Biology · doi:10.1016/j.ydbio.2004.10.010 · Cited by 29

Overexpression of genes in Purkinje cells in the embryonic chicken cerebellum by in vivo electroporation

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SOX2 transcription factor binding and function

Hagey, D. W., Bergsland, M., & Muhr, J. (2022) · Development · doi:10.1242/dev.200547 · Cited by 34

Functional Overload Enhances Satellite Cell Properties in Skeletal Muscle

Fujimaki, S., Machida, M., Wakabayashi, T., Asashima, M., Takemasa, T., & Kuwabara, T. (2015) · Stem Cells International · doi:10.1155/2016/7619418 · Cited by 27

Mitotic phosphorylation of SOX2 mediated by Aurora kinase A is critical for the stem-cell like cell maintenance in PA-1 cells

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Specific domains of FoxD4/5 activate and repress neural transcription factor genes to control the progression of immature neural ectoderm to differentiating neural plate

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Isolation of Human Multipotent Neural Progenitors from Adult Filum Terminale

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Evolving gene regulatory networks into cellular networks guiding adaptive behavior: an outline how single cells could have evolved into a centralized neurosensory system

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Crumbs 2 prevents cortical abnormalities in mouse dorsal telencephalon

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SOX2 hypomorphism disrupts development of the prechordal floor and optic cup

Langer, L., Taranova, O., Sulik, K. K., & Pevny, L. (2012) · Mechanisms of Development · doi:10.1016/j.mod.2012.04.001 · Cited by 27

De novo microdeletions and point mutations affecting SOX2 in three individuals with intellectual disability but without major eye malformations

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SOX19b regulates the premature neuronal differentiation of neural stem cells through EZH2-mediated histone methylation in neural tube development of zebrafish

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Akt Increases Sox2 Expression in Adult Hippocampal Neural Progenitor Cells, but Increased Sox2 Does Not Promote Proliferation

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Rosiglitazone enhances the proliferation of neural progenitor cells and inhibits inflammation response after spinal cord injury

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Single-Factor SOX2 Mediates Direct Neural Reprogramming of Human Mesenchymal Stem Cells via Transfection of In Vitro Transcribed mRNA

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A critical role for miR-184 in the fate determination of oligodendrocytes

Afrang, N., Tavakoli, R., Tasharrofi, N., Alian, A., Sohi, A. N., Kabiri, M., Fathi‐Roudsari, M., Zomorrod, M. S., Rajaei, F., Soleimani, M., et al. (2019) · Stem Cell Research & Therapy · doi:10.1186/s13287-019-1208-y · Cited by 28

Sox21 inhibits glioma progression in vivo by forming complexes with Sox2 and stimulating aberrant differentiation

Caglayan, D., Lundin, E., Kastemar, M., Westermark, B., & Ferletta, M. (2013) · International Journal of Cancer · doi:10.1002/ijc.28147 · Cited by 26

Genome-wide identification and transcriptome-based expression analysis of sox gene family in the Japanese flounder Paralichthys olivaceus

Yu, H., Du, X., Li, X., Qu, J., Zhu, H., Zhang, Q., & Wang, X. (2018) · Journal of Oceanology and Limnology · doi:10.1007/s00343-018-7216-4 · Cited by 26

Repressive interactions in gene regulatory networks: When you have no other choice

Delàs, M. J., & Briscoe, J. (2020) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/bs.ctdb.2020.03.003 · Cited by 25

Developmental Cues and Molecular Drivers in Myelinogenesis: Revisiting Early Life to Re-Evaluate the Integrity of CNS Myelin

Dermitzakis, I., Μanthou, M. E., Meditskou, S., Miliaras, D., Kesidou, E., Boziki, M. K., Petratos, S., Grigoriadis, N., & Theotokis, P. (2022) · Current Issues in Molecular Biology · doi:10.3390/cimb44070222 · Cited by 26

Direct transcriptional regulation of Six6 is controlled by SoxB1 binding to a remote forebrain enhancer

Lee, B., Rizzoti, K., Kwon, D., Kim, S., Oh, S., Epstein, D. J., Son, Y., Yoon, J., Baek, K., & Jeong, Y. (2012) · Developmental Biology · doi:10.1016/j.ydbio.2012.04.023 · Cited by 26

Molecular and Cellular Mechanisms Contributing to the Regulation, Proliferation and Differentiation of Neural Stem Cells in the Adult Dentate Gyrus

Gage, F. H. (2010) · The Keio Journal of Medicine · doi:10.2302/kjm.59.79 · Cited by 26

Quantitative analysis reveals dominance of gliogenesis over neurogenesis in an adult brainstem oscillator

Sîrbulescu, R. F., Ilieş, I., & Zupanc, G. K. H. (2014) · Developmental Neurobiology · doi:10.1002/dneu.22176 · Cited by 26

Organization and physiology of the zebrafish nervous system

Bally‐Cuif, L., & Vernier, P. (2010) · Fish physiology · doi:10.1016/s1546-5098(10)02902-x · Cited by 25

Intrinsic regulations in neural fate commitment

Tang, K., Peng, G., Qiao, Y., Song, L., & Jing, N. (2015) · Development Growth & Differentiation · doi:10.1111/dgd.12204 · Cited by 24

Polyalanine expansion mutations in the X-linked hypopituitarism gene SOX3 result in aggresome formation and impaired transactivation

Wong, J. T. (2006) · Frontiers in bioscience · doi:10.2741/2213 · Cited by 25

Waking up the sleepers: shared transcriptional pathways in axonal regeneration and neurogenesis

Quadrato, G., & Giovanni, S. D. (2012) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-012-1099-x · Cited by 25

Loss of adenomatous polyposis coli (apc) results in an expanded ciliary marginal zone in the zebrafish eye

Stephens, W. Z., Senecal, M., Nguyen, M., & Piotrowski, T. (2010) · Developmental Dynamics · doi:10.1002/dvdy.22325 · Cited by 27

Sox2 gene regulation via the D1 enhancer in embryonic neural tube and neural crest by the combined action of SOX2 and ZIC2

Iida, H., Furukawa, Y., Teramoto, M., Suzuki, H., Takemoto, T., Uchikawa, M., & Kondoh, H. (2020) · Genes to Cells · doi:10.1111/gtc.12753 · Cited by 25

Chromaffin Progenitor Cells from the Adrenal Medulla

Ehrhart‐Bornstein, M., Vukićević, V., Chung, K.-F., Ahmad, M., & Bornstein, S. R. (2010) · Cellular and Molecular Neurobiology · doi:10.1007/s10571-010-9571-3 · Cited by 26

sox2 and sox3 cooperate to regulate otic/epibranchial placode induction in zebrafish

Gou, Y., Guo, J., Maulding, K., & Riley, B. B. (2018) · Developmental Biology · doi:10.1016/j.ydbio.2018.01.011 · Cited by 24

Mapping of clonal lineages across developmental stages in human neural differentiation

You, Z., Wang, L., He, H., Wu, Z., Zhang, X., Xue, S., Xu, P., Hong, Y., Xiong, M., Wei, W., et al. (2023) · Cell stem cell · doi:10.1016/j.stem.2023.02.007 · Cited by 22

Upregulation of SOX2, NOTCH1, and ID1 in supratentorial primitive neuroectodermal tumors: a distinct differentiation pattern from that of medulloblastomas

Phi, J. H., Kim, J. H., Eun, K. M., Wang, K., Park, K. H., Choi, S. A., Kim, Y. Y., Park, S., Cho, B.-K., & Kim, S. (2010) · Journal of Neurosurgery Pediatrics · doi:10.3171/2010.2.peds1065 · Cited by 24

Transcription factor protein expression patterns by neural or neuronal progenitor cells of adult monkey subventricular zone

Tonchev, A. B., Yamashima, T., Sawamoto, K., & Okano, H. (2006) · Neuroscience · doi:10.1016/j.neuroscience.2006.01.053 · Cited by 24

The Sox transcriptional factors: Functions during intestinal development in vertebrates

Fu, L., & Shi, Y. (2016) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2016.08.022 · Cited by 24

A single cell transcriptional portrait of embryoid body differentiation and comparison to progenitors of the developing embryo

Spangler, A., Su, E. Y., Craft, A. M., & Cahan, P. (2018) · Stem Cell Research · doi:10.1016/j.scr.2018.07.022 · Cited by 24

The Xenopus POU class V transcription factor XOct-25 inhibits ectodermal competence to respond to bone morphogenetic protein-mediated embryonic induction

Takebayashi‐Suzuki, K., Arita, N., Murasaki, E., & Suzuki, A. (2007) · Mechanisms of Development · doi:10.1016/j.mod.2007.09.005 · Cited by 24

Hierarchical reactivation of transcription during mitosis-to-G1 transition by Brn2 and Ascl1 in neural stem cellsPreprint

Soares, M. A. F., Soares, D. S., Teixeira, V., Heskol, A., Bressan, R. B., Pollard, S. M., Oliveira, R. A., & Castro, D. S. (2021) · Genes & Development · doi:10.1101/gad.348174.120 · Cited by 26

Development of the Pituitary Gland

Alatzoglou, K. S., Gregory, L. C., & Dattani, M. (2020) · Comprehensive physiology · doi:10.1002/j.2040-4603.2020.tb00113.x · Cited by 23

Loss of Pluripotency in Human Embryonic Stem Cells Directly Correlates with an Increase in Nuclear Zinc

Wolford, J. L., Chishti, Y., Jin, Q., Ward, J. D., Chen, L., Vogt, S., & Finney, L. A. (2010) · PLoS ONE · doi:10.1371/journal.pone.0012308 · Cited by 23

Stimulation of cell proliferation in the subventricular zone by synthetic murine pheromones

小山, 幸., Soini, H. A., Foley, J., Novotný, M. V., & Lai, C. (2013) · Frontiers in Behavioral Neuroscience · doi:10.3389/fnbeh.2013.00101 · Cited by 24

The cell cycle and differentiation as integrated processes: Cyclins and CDKs reciprocally regulate Sox and Notch to balance stem cell maintenance

Muhr, J., & Hagey, D. W. (2021) · BioEssays · doi:10.1002/bies.202000285 · Cited by 23

Transcriptome pyrosequencing of the Antarctic brittle star Ophionotus victoriae

Burns, G., Thorndyke, M. C., Peck, L. S., & Clark, M. S. (2012) · Marine Genomics · doi:10.1016/j.margen.2012.05.003 · Cited by 23

Potent molecular-targeted therapies for gastro-entero-pancreatic neuroendocrine carcinoma

Ooki, A., Osumi, H., Fukuda, K., & Yamaguchi, K. (2023) · Cancer and Metastasis Reviews · doi:10.1007/s10555-023-10121-2 · Cited by 24

Cyclin-Dependent Kinase-Dependent Phosphorylation of Sox2 at Serine 39 Regulates Neurogenesis

Lim, S., Bhinge, A., Alonso, S. B., Aksoy, I., Aprea, J., Cheok, C. F., Calegari, F., Stanton, L. W., & Kaldis, P. (2017) · Molecular and Cellular Biology · doi:10.1128/mcb.00201-17 · Cited by 24

Additive neurogenesis supported by multiple stem cell populations mediates adult spinal cord development: A spatiotemporal statistical mapping analysis in a teleost model of indeterminate growth

Sîrbulescu, R. F., Ilieş, I., Meyer, A., & Zupanc, G. K. H. (2017) · Developmental Neurobiology · doi:10.1002/dneu.22511 · Cited by 22

Six1 and Eya1 both promote and arrest neuronal differentiation by activating multiple Notch pathway genes

Riddiford, N. J., & Schlosser, G. (2017) · Developmental Biology · doi:10.1016/j.ydbio.2017.09.027 · Cited by 22

Crazy Little Thing Called Sox—New Insights in Oligodendroglial Sox Protein Function

Wittstatt, J., Reiprich, S., & Küspert, M. (2019) · International Journal of Molecular Sciences · doi:10.3390/ijms20112713 · Cited by 25

The effect of melatonin on Hippo signaling pathway in dental pulp stem cells

Baysal, E., Zırh, E. B., Büber, E., Kanhema, T., & Zeybek, N. D. (2021) · Neurochemistry International · doi:10.1016/j.neuint.2021.105079 · Cited by 22

Elevated levels of ZAC1 disrupt neurogenesis and promote rapid in vivo reprogramming

Rraklli, V., Södersten, E., Nyman, U., Hagey, D. W., & Holmberg, J. (2015) · Stem Cell Research · doi:10.1016/j.scr.2015.11.002 · Cited by 22

Human spinal cord in vitro differentiation pace is initially maintained in heterologous embryonic environments

Dady, A., Davidson, L., Halley, P. A., & Storey, K. G. (2022) · eLife · doi:10.7554/elife.67283 · Cited by 21

Artificial Induction of Sox21 Regulates Sensory Cell Formation in the Embryonic Chicken Inner Ear

Freeman, S. D., & Daudet, N. (2012) · PLoS ONE · doi:10.1371/journal.pone.0046387 · Cited by 21

Molecular Cloning, Promoter Analysis and Expression Profiles of the sox3 Gene in Japanese Flounder, Paralichthys olivaceus

Gao, J., Li, P., Zhang, W., Wang, Z., Wang, X., & Zhang, Q. (2015) · International Journal of Molecular Sciences · doi:10.3390/ijms161126079 · Cited by 21

The nucleosome remodeling and deacetylase complex protein CHD4 regulates neural differentiation of mouse embryonic stem cells by down-regulating p53

Hirota, A., Nakajima‐Koyama, M., Ashida, Y., & Nishida, E. (2018) · Journal of Biological Chemistry · doi:10.1074/jbc.ra118.004086 · Cited by 21

SOX3 duplication: A genetic cause to investigate in fetuses with neural tube defects

Hureaux, M., Miled, S. B., Chatron, N., Coussement, A., Bessières, B., Egloff, M., Mechler, C., Stirnemann, J., Tsatsaris, V., Barcia, G., et al. (2019) · Prenatal Diagnosis · doi:10.1002/pd.5523 · Cited by 21

Regulation of SOX3 gene expression is driven by multiple NF-Y binding elements

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Neural-fated self-renewing cells regulated by Sox2 during secondary neurulation in chicken tail bud

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