Genomic Islands in Pathogenic and Environmental Microorganisms

Dobrindt, Ulrich, Hochhut, Bianca, Hentschel, Ute, Hacker, Jörg·2004·Nature Reviews Microbiology

Cited by (1,001)

Items 201–300 of 1,001

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    Mark Eppinger, Claudia Baar, Guenter Raddatz, Daniel H. Huson, Stephan Christoph Schuster · 2004 · Nature Reviews Microbiology
  2. Genomic Island TnSmu2 of Streptococcus mutans Harbors a Nonribosomal Peptide Synthetase-Polyketide Synthase Gene Cluster Responsible for the Biosynthesis of Pigments Involved in Oxygen and H 2 O 2 Tolerance
    Chenggang Wu, Robert H. Cichewicz, Yihong Li, Jinman Liu, Bruce A. Roe, Joseph J. Ferretti, Justin L. Merritt, Fengxia Qi · 2010 · Applied and Environmental Microbiology
  3. Genome organization of epidemic Acinetobacter baumannii strains
    Pier Paolo Di Nocera, Francesco Rocco, Maria Giannouli, Maria Triassi, Raffaele Zarrilli · 2011 · BMC Microbiology
  4. Molecular features of bile salt hydrolases and relevance in human health
    Deepak Chand, Vellore Sunder Avinash, Yashpal Yadav, Archana Vishnu Pundle, Cheravakattu Gopalan Suresh, Sureshkumar Ramasamy · 2016 · Biochimica et Biophysica Acta (BBA) - General Subjects
  5. Controlled Biomineralization by and Applications of Magnetotactic Bacteria
    Dennis A. Bazylinski, Sabrina Schübbe · 2007 · Advances in applied microbiology
  6. Griseofulvin: An Updated Overview of Old and Current Knowledge
    Parisa Aris, Yulong Wei, Masoud Mohamadzadeh, Xuhua Xia · 2022 · Molecules
  7. Dynamic analysis of a genomic island in Magnetospirillum sp. strain AMB‐1 reveals how magnetosome synthesis developed
    Yorikane Fukuda, Yoshiko Okamura, Haruko Takeyama, Tadashi Matsunaga · 2006 · FEBS Letters
  8. Genome dynamics and its impact on evolution of Escherichia coli
    Ulrich Dobrindt, M. Geddam Chowdary, G. Krumbholz, Jörg Hinrich Hacker · 2010 · Medical Microbiology and Immunology
  9. Genotypes of Klebsiella oxytoca Isolates from Patients with Nosocomial Pneumonia Are Distinct from Those of Isolates from Patients with Antibiotic-Associated Hemorrhagic Colitis
    Kathrin A. T. Herzog, Georg Schneditz, Eva Leitner, Gebhard Feierl, Karl Martin Hoffmann, Ines Zollner‐Schwetz, Robert G. E. Krause, Gregor Gorkiewicz, Ellen L. Zechner, Christoph Högenauer · 2014 · Journal of Clinical Microbiology
  10. Defining Pathogenic Bacterial Species in the Genomic Era
    Kalliopi Georgiades, Didier Raoult · 2011 · Frontiers in Microbiology · Retracted
  11. Towards pathogenomics: a web-based resource for pathogenicity islands
    Sung Ho Yoon, Y.-K. Park, S. Lee, Doil Choi, Tae-Kwang Oh, C.-G. Hur, J. F. Kim · 2006 · Nucleic Acids Research
  12. New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration
    Chloé Ambroset, Charles Coluzzi, Gérard Guédon, Marie‐Dominique Devignes, Valentin Loux, Thomas Lacroix, Sophie Payot, Nathalie Leblond‐Bourget · 2016 · Frontiers in Microbiology
  13. Chalkophores
    Grace E. Kenney, Amy C. Rosenzweig · 2018 · Annual Review of Biochemistry
  14. Comparative Genome Analysis of Enterobacter cloacae
    Wing-Yee Liu, Chifat Wong, Karl Ming-Kar Chung, Jingwei Jiang, Frederick Chi-Ching Leung · 2013 · PLoS ONE
  15. Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site
    Jessica E. Butler, Qiang He, Kelly P. Nevin, Zhili He, Jizhong Z. Zhou, Derek R. Lovley · 2007 · BMC Genomics
  16. The Impact of Recombination on dN/dS within Recently Emerged Bacterial Clones
    Santiago Castillo‐Ramírez, Simon R. Harris, Matthew T. G. Holden, Miao He, Julian Parkhill, Stephen D. Bentley, Edward J. Feil · 2011 · PLoS Pathogens
  17. Cognitive Biology
    Gennaro Auletta · 2011
  18. The Vibrio seventh pandemic island-II is a 26{middle dot}9 kb genomic island present in Vibrio cholerae El Tor and O139 serogroup isolates that shows homology to a 43{middle dot}4 kb genomic island in V. vulnificus
    Yvonne A. O’Shea · 2004 · Microbiology
  19. Phylum XXVI. Actinobacteria phyl. nov.
    Michael Goodfellow · 2012 · Springer eBooks
  20. Exploring the influence of the gut microbiota and probiotics on health: a symposium report
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  21. Bacterial recombination promotes the evolution of multi-drug-resistance in functionally diverse populations
    Gabriel G. Perron, Alexander E. G. Lee, Yun Wang, Wei E. Huang, Timothy G. Barraclough · 2011 · Proceedings of the Royal Society B Biological Sciences
  22. Widespread Occurrence and Genomic Context of Unusually Small Polyketide Synthase Genes in Microbial Consortia Associated with Marine Sponges
    Lars Fieseler, Ute Hentschel, Lubomir Grozdanov, Andreas Schirmer, Gaiping Wen, Matthias Platzer, Siniša Hrvatin, Daniel Butzke, Katrin Zimmermann, Jörn Piel · 2007 · Applied and Environmental Microbiology
  23. Assembly and transfer of tripartite integrative and conjugative genetic elements
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  24. The limitations of draft assemblies for understanding prokaryotic adaptation and evolution
    Nicole Ricker, H. Qian, Roberta R. Fulthorpe · 2012 · Genomics
  25. Identifying Pathogenicity Islands in Bacterial Pathogenomics Using Computational Approaches
    Dongsheng Che, Mohammad Hasan, Bernard K. Chen · 2014 · Pathogens
  26. Coastal Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity
    Brian P. Palenik, Q. Ren, Vera Tai, Ian T. Paulsen · 2008 · Environmental Microbiology
  27. Global transcriptional analysis of nitrogen fixation and ammonium repression in root-associated Pseudomonas stutzeri A1501
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  28. Demonstrating plasmid-based horizontal gene transfer in complex environmental matrices: A practical approach for a critical review
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    Leonard Simon van Overbeek, Joop van Doorn, Jan H. Wichers, A. van Amerongen, H.J.W. van Roermund, Peter Willemsen · 2014 · Frontiers in Microbiology
  30. Genomic Insights into the Contribution of Phytopathogenic Bacterial Plasmids to the Evolutionary History of Their Hosts
    George W. Sundin · 2007 · Annual Review of Phytopathology
  31. Horizontally acquired papGII-containing pathogenicity islands underlie the emergence of invasive uropathogenic Escherichia coli lineages
    Michael Biggel, Basil Britto Xavier, James R. Johnson, Karen Leth Nielsen, Niels Frimodt‐Møller, Veerle Matheeussen, Herman Goossens, Pieter Moons, Sandra Van Puyvelde · 2020 · Nature Communications
  32. Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness
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  33. The role of horizontal gene transfer in the evolution of selected foodborne bacterial pathogens
    Bridget G. Kelly, A. Vespermann, Declan Bolton · 2008 · Food and Chemical Toxicology
  34. Flexible genomic islands as drivers of genome evolution
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  35. Genomic and pathogenicity islands of Listeria monocytogenes—overview of selected aspects
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  46. Genome evolution in bacteria: order beneath chaos
    Jeffrey G. Lawrence, Heather Lyn Hendrickson · 2005 · Current Opinion in Microbiology
  47. Magnetotactic Bacteria
    Dennis A. Bazylinski, Christopher T. Lefèvre, Dirk Schüler · 2013 · Springer eBooks
  48. A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria
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  49. Complete Genome Analysis of Three Acinetobacter baumannii Clinical Isolates in China for Insight into the Diversification of Drug Resistance Elements
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  50. Identification of the Regulatory Logic Controlling Salmonella Pathoadaptation by the SsrA-SsrB Two-Component System
    Ana M. Tomljenovic-Berube, David T. Mulder, Matthew D. Whiteside, Fiona S. L. Brinkman, Brian K. Coombes · 2010 · PLoS Genetics
  51. Transmission of antibiotic resistance genes through mobile genetic elements in Acinetobacter baumannii and gene-transfer prevention
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  52. Ancient horizontal gene transfer can benefit phylogenetic reconstruction
    Jinling Huang, Johann Peter Gogarten · 2006 · Trends in Genetics
  53. Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome
    Biju Joseph, Roland F. Schwarz, Burkhard Linke, Jochen Blom, Anke Becker, Heike Claus, Alexander Goesmann, Matthias Frosch, Tobias Müller, Ulrich Felix Vogel et al. · 2011 · PLoS ONE
  54. Common Evolutionary Origin for the Unstable Virulence Plasmid pMUM Found in Geographically Diverse Strains ofMycobacterium ulcerans
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  55. The survival and removal mechanism of Sphingobacterium changzhouense TC931 under tetracycline stress and its’ ecological safety after application
    Zewen Tan, Jiacheng Chen, Yiling Liu, Lian Chen, Yuqing Xu, Yixuan Zou, Yongtao Li, Beini Gong · 2021 · Bioresource Technology
  56. A New Family of Secreted Toxins in Pathogenic Neisseria Species
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  57. From food to cell: nutrient exploitation strategies of enteropathogens
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  58. Computational methods for predicting genomic islands in microbial genomes
    Bingxin Lu, Hon Wai Leong · 2016 · Computational and Structural Biotechnology Journal
  59. Experimental Evolution as a Tool to Investigate Natural Processes and Molecular Functions
    Philippe Remigi, Catherine Masson‐Boivin, Eduardo P. C. Rocha · 2019 · Trends in Microbiology
  60. Characterization of AvrBs3-Like Effectors from a Brassicaceae Pathogen Reveals Virulence and Avirulence Activities and a Protein with a Novel Repeat Architecture
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  61. Postgenomic analysis of bacterial pathogens repertoire reveals genome reduction rather than virulence factors
    Vicky Merhej, Kalliopi Georgiades, Didier Raoult · 2013 · Briefings in Functional Genomics
  62. Microbial Lifestyle and Genome Signatures
    Chitra Dutta · 2012 · Current Genomics
  63. Biocides and health-care agents are more than just antibiotics: Inducing cross to co-resistance in microbes
    Debarati Paul, Ranadhir Chakraborty, Santi M. Mandal · 2019 · Ecotoxicology and Environmental Safety
  64. A genomic island provides Acidithiobacillus ferrooxidans ATCC 53993 additional copper resistance: a possible competitive advantage
    Luis H. Orellana, Carlos A. Jerez · 2011 · Applied Microbiology and Biotechnology
  65. Evidence for Horizontal Gene Transfer as Origin of Putrescine Production in Oenococcus oeni RM83
    Angela M. Marcobal, Blanca de las Rivas, María Victoria Moreno-Arribas, Rosario Múñoz · 2006 · Applied and Environmental Microbiology
  66. Coevolution of the Organization and Structure of Prokaryotic Genomes.
    M. Touchon, E. Rocha · 2016 · Cold Spring Harbor Perspectives in Biology
  67. The evolution and expression of virulence
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  68. Acquired Type III Secretion System Determines Environmental Fitness of Epidemic Vibrio parahaemolyticus in the Interaction with Bacterivorous Protists
    Carsten Matz, Bianka Nouri, Linda L. McCarter, Jaime Martínez-Urtaza · 2011 · PLoS ONE
  69. Uropathogenic E. coli Induce Different Immune Response in Testicular and Peritoneal Macrophages: Implications for Testicular Immune Privilege
    Sudhanshu Bhushan, Hamid Hossain, Yongning Lu, Geisler Andreas, Svetlin Tchatalbachev, Zbigniew Mikulski, Gerhard C Schuler, Jörg Klug, Adrian M. E. Pilatz, Florian Wagenlehner et al. · 2011 · PLoS ONE
  70. Genomic islands ofPseudomonas aeruginosa
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  71. The Evolution of Virulence in Non-O157 Shiga Toxin-Producing Escherichia Coli
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  72. Clustered Genes Related to Sulfate Respiration in Uncultured Prokaryotes Support the Theory of Their Concomitant Horizontal Transfer
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  73. Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas
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  74. DNA bridging and antibridging: a role for bacterial nucleoid-associated proteins in regulating the expression of laterally acquired genes
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  75. Identification of Six Type III Effector Genes with the PIP Box in Xanthomonas campestris pv. campestris and Five of Them Contribute Individually to Full Pathogenicity
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