Genomic islands in pathogenic and environmental microorganisms

Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology

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Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology

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Escherichia coli and Salmonella typhimurium: Cellular and molecular biology

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Lateral gene transfer and the nature of bacterial innovation

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Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)

Bentley, S. D., Chater, K. F., Cerdeño-Tárraga, A. M., Challis, G. L., Thomson, N. R., James, K., Harris, D. E., Quail, M. A., Kieser, H. M., Harper, D., et al. (2002) · Nature · doi:10.1038/417141a · Cited by 3,226

Type III Protein Secretion Systems in Bacterial Pathogens of Animals and Plants

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

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Whole genome sequencing of meticillin-resistant Staphylococcus aureus

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DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae

Heidelberg, J. F., Eisen, J. A., Nelson, W. C., Clayton, R. A., Gwinn, M. L., Dodson, R. J., Haft, D. H., Hickey, E. K., Peterson, J. D., Umayam, L. A., et al. (2000) · Nature · doi:10.1038/35020000 · Cited by 1,871

Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli

Welch, R. A., Burland, V., Plunkett, G., Redford, P., Roesch, P. L., Rasko, D. A., Buckles, E. L., Liou, S., Boutin, A., Hackett, J. D., et al. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.252529799 · Cited by 1,523

Mobility of the Yersinia high-pathogenicity island (HPI): Transfer mechanisms of pathogenicity islands (PAIs) revisited

Benedek, O., & Schubert, S. (2007) · Acta Microbiologica et Immunologica Hungarica · doi:10.1556/amicr.54.2007.2.1 · Cited by 13

Genomic Islands as a Marker to Differentiate between Clinical and Environmental Burkholderia pseudomallei

Bartpho, T., Wongsurawat, T., Wongratanacheewin, S., Talaat, A. M., Karoonuthaisiri, N., & Sermswan, R. W. (2012) · PLoS ONE · doi:10.1371/journal.pone.0037762 · Cited by 13

A quantitative account of genomic island acquisitions in prokaryotes

Roos, T. E., & van Passel, M. W. J. (2011) · BMC Genomics · doi:10.1186/1471-2164-12-427 · Cited by 13

Integrative bacterial artificial chromosomes for DNA integration into the Bacillus subtilis chromosome

Juhas, M., & Ajioka, J. W. (2016) · Journal of Microbiological Methods · doi:10.1016/j.mimet.2016.03.017 · Cited by 13

Draft Genome Sequences of Two Magnetotactic Bacteria, Magnetospirillum moscoviense BB-1 and Magnetospirillum marisnigri SP-1

Koziaeva, V. V., Dziuba, M. V., Ivanov, T. M., Kuznetsov, B. B., Skryabin, K. G., & Grouzdev, D. S. (2016) · Genome Announcements · doi:10.1128/genomea.00814-16 · Cited by 13

Pan-genome analysis of Riemerella anatipestifer reveals its genomic diversity and acquired antibiotic resistance associated with genomic islands

Zhu, D., Yang, Z., Xu, J., Wang, M., Jia, R., Chen, S., Liu, M., Zhao, X., Yang, Q., Wu, Y., et al. (2019) · Functional & Integrative Genomics · doi:10.1007/s10142-019-00715-x · Cited by 13

Identification and comparative analysis of a genomic island in Mycobacterium avium subsp. hominissuis

Lahiri, A., Sanchini, A., Semmler, T., Schäfer, H., & Lewin, A. (2014) · FEBS Letters · doi:10.1016/j.febslet.2014.08.037 · Cited by 13

The pheV Phenylalanine tRNA Gene in Klebsiella pneumoniae Clinical Isolates Is an Integration Hotspot for Possible Niche-Adaptation Genomic Islands

Chen, N., Ou, H., van Aartsen, J. J., Jiang, X., Li, M., Yang, Z., Wei, Q., Chen, X., He, X., Deng, Z., et al. (2009) · Current Microbiology · doi:10.1007/s00284-009-9526-4 · Cited by 13

Threat of infection: Microbes of high pathogenic potential – strategies for detection, control and eradication

Hammerschmidt, S., Hacker, J. H., & Klenk, H. (2005) · International Journal of Medical Microbiology · doi:10.1016/j.ijmm.2005.03.004 · Cited by 13

Evolutionary Adaptation of an AraC-Like Regulatory Protein in Citrobacter rodentium and Escherichia Species

Tan, A., Petty, N. K., Hocking, D. M., Bennett-Wood, V. R., Wakefield, M. J., Praszkier, J., Tauschek, M., Yang, J. W., & Robins-Browne, R. M. (2015) · Infection and Immunity · doi:10.1128/iai.02697-14 · Cited by 13

The non-motile phenotype of Salmonella hha ydgT mutants is mediated through PefI-SrgD

Wallar, L. E., Bysice, A. M., & Coombes, B. K. (2011) · BMC Microbiology · doi:10.1186/1471-2180-11-141 · Cited by 13

Identification of a mobilizable, multidrug-resistant genomic island in Myroides odoratimimus isolated from Tibetan pasture

Zhang, P., Liu, M., Fu, J., Zhong, C., Zong, G., & Cao, G. (2020) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2020.137970 · Cited by 13

Exploring Mobile Genetic Elements in Vibrio cholerae

Dörr, N. C. D., Lemopoulos, A., & Blokesch, M. (2025) · Genome Biology and Evolution · doi:10.1093/gbe/evaf079 · Cited by 12

Comparative genomics study reveals Red Sea Bacillus with characteristics associated with potential microbial cell factories (MCFs)

Othoum, G., Prigent, S., Derouiche, A., Shi, L., Bokhari, A., Alamoudi, S. A., Bougouffa, S., Gao, X., Hoehndorf, R., Arold, S. T., et al. (2019) · Scientific Reports · doi:10.1038/s41598-019-55726-2 · Cited by 12

Genomic analysis of Chromobacterium haemolyticum: insights into the species resistome, virulence determinants and genome plasticity

Teixeira, P., Tacão, M., Baraúna, R. A., Silva, A., & Henriques, I. S. (2020) · Molecular Genetics and Genomics · doi:10.1007/s00438-020-01676-8 · Cited by 12

Introducing Evolutionary Thinking For Medicine

Stearns, S. C., Nesse, R. M., & Haig, D. (2007) · Oxford University Press eBooks · doi:10.1093/acprof:oso/9780199207466.003.0001 · Cited by 12

A fructose/H+ symporter controlled by a LacI-type regulator promotes survival of pandemic Vibrio cholerae in seawater

Liu, Y., Liu, B., Xu, T., Wang, Q., Li, W., Wu, J., Zheng, X., Liu, B., Liu, R., Liu, X., et al. (2021) · Nature Communications · doi:10.1038/s41467-021-24971-3 · Cited by 12

Characterization of a novel zinc transporter ZnuA acquired by Vibrio parahaemolyticus through horizontal gene transfer

Liu, M., Yan, M., Liu, L., & Chen, S. (2013) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2013.00061 · Cited by 12

Whole-genome analysis of New Delhi Metallo-Beta-Lactamase-1-producing Acinetobacter haemolyticus from China

Jiang, L., Yu, Y., Zeng, W., Guo, J., Lv, F., Wang, X., Liu, X., & Zhao, Z. (2019) · Journal of Global Antimicrobial Resistance · doi:10.1016/j.jgar.2019.05.012 · Cited by 12

Genomic Variations Underlying Speciation and Niche Specialization of Shewanella baltica

Deng, J., Auchtung, J. M., Konstantinidis, K. T., Brettar, I., Höfle, M. G., & Tiedje, J. M. (2019) · mSystems · doi:10.1128/msystems.00560-19 · Cited by 12

The Use of Extremophilic Microorganisms in the Industrial Recovery of Metals

Jerez, C. A. (2012) · Extremophiles · doi:10.1002/9781118394144.ch12 · Cited by 12

Nocardioides

Evtushenko, L. I., Krausova, V. I., & Yoon, J. (2015) · Wiley eBooks · doi:10.1002/9781118960608.gbm00159 · Cited by 12

Comprehensive probiogenomics analysis of the commensal Escherichia coli CEC15 as a potential probiotic strain

da Silva, T. F., Glória, R. D. A., de Sousa, T. J., Americo, M. F., Freitas, A. D. S., Viana, M. V. C., de Jesus, L. C. L., da Silva Prado, L. C., Daniel, N., Ménard, O., et al. (2023) · BMC Microbiology · doi:10.1186/s12866-023-03112-4 · Cited by 11

Genomic features, antimicrobial susceptibility, and epidemiological insights into Burkholderia cenocepacia clonal complex 31 isolates from bloodstream infections in India

Saroha, T., Patil, P. P., Rana, R., Kumar, R., Kumar, S., Singhal, L., Gautam, V., & Patil, P. B. (2023) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2023.1151594 · Cited by 11

An efficient genomic signature ranking method for genomic island prediction from a single genome

Tao, J., Liu, X., Yang, S., Bao, C., He, P., & Dai, Q. (2019) · Journal of Theoretical Biology · doi:10.1016/j.jtbi.2019.02.008 · Cited by 11

xenoGI: reconstructing the history of genomic island insertions in clades of closely related bacteria

Bush, E., Clark, A. E., DeRanek, C. A., Eng, A., Forman, J., Heath, K. N., Lee, A. B., Stoebel, D. M., Wang, Z., Wilber, M., et al. (2018) · BMC Bioinformatics · doi:10.1186/s12859-018-2038-0 · Cited by 11

Genome-based insights into the resistomes and mobilomes of two Providencia rettgeri strains isolated from wound infections in Madagascar

Tchuinte, P. L. S., Rabenandrasana, M. A. N., Ramparany, L., Ratsima, E. H., Enouf, V., Randrianirina, F., & Collard, J. (2019) · Journal of Global Antimicrobial Resistance · doi:10.1016/j.jgar.2019.07.013 · Cited by 11

Fluxes of the Amazon River plume nutrients and microbes into marine sponges

de Menezes, T. A., de Freitas, M. A. M., Lima, M. S., Soares, A. C., Leal, C. V., Busch, M., Tschoeke, D. A., Vidal, L. O., Atella, G. C., Krüger, R. H., et al. (2022) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2022.157474 · Cited by 11

Life Within a Contaminated Niche: Comparative Genomic Analyses of an Integrative Conjugative Element ICEnahCSV86 and Two Genomic Islands From Pseudomonas bharatica CSV86T Suggest Probable Role in Colonization and Adaptation

Mohapatra, B., Malhotra, H., & Phale, P. S. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2022.928848 · Cited by 11

Improvement of fitness and biocontrol properties of Pseudomonas putida via an extracellular heme peroxidase

Santamaría‐Hernando, S., Bruyne, L. D., Höfte, M., & Ramos‐González, M. I. (2022) · Microbial Biotechnology · doi:10.1111/1751-7915.14123 · Cited by 11

Detection and characterization of potentially hybrid enteroaggregative Escherichia coli (EAEC) strains isolated from urinary tract infection

Moazeni, S., Badouei, M. A., Hashemitabar, G., Rezatofighi, S. E., & Mahmoodi, F. (2023) · Brazilian Journal of Microbiology · doi:10.1007/s42770-023-01195-9 · Cited by 11

Comparative analysis of essential genes in prokaryotic genomic islands

Zhang, X., Peng, C., Zhang, G., & Gao, F. (2015) · Scientific Reports · doi:10.1038/srep12561 · Cited by 11

A large scale comparative genomic analysis reveals insertion sites for newly acquired genomic islands in bacterial genomes

Du, P., Yang, Y., Wang, H., Liu, D., Gao, G. F., & Chen, C. (2011) · BMC Microbiology · doi:10.1186/1471-2180-11-135 · Cited by 11

Identification of a transposable genomic island of Paracoccus pantotrophus DSM 11072 by its transposition to a novel entrapment vector pMMB2

Mikosa, M., Sochacka-Piętal, M., Baj, J., & Bartosik, D. (2006) · Microbiology · doi:10.1099/mic.0.28603-0 · Cited by 11

Chromosome Architecture and Gene Content of the Emergent Pathogen Acinetobacter haemolyticus

Castro-Jaimes, S., Bello‐López, E., Velázquez-Acosta, C., Volkow-Fernández, P. A., Lozano-Zaraín, P., Castillo‐Ramírez, S., & Cevallos, M. A. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.00926 · Cited by 11

A bioinformatic approach to identify core genome difference between Salmonella Pullorum and Salmonella Enteritidis

Fei, X., Li, Q., Olsen, J. E., & Jiao, X. (2020) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2020.104446 · Cited by 11

The Importance of Mobile Genetic Elements in the Evolution of Salmonella: Pathogenesis, Antibiotic Resistance and Host Adaptation

Silva, C., Wiesner, M., & Calv, E. (2012) · InTech eBooks · doi:10.5772/28024 · Cited by 12

Co-evolution of genomic islands and their bacterial hosts revealed through phylogenetic analyses of 17 groups of homologous genomic islands

Guo, F., Wei, W., Wang, X. L., Lin, H., Ding, H., Huang, J. H., & Rao, N. (2012) · Genetics and Molecular Research · doi:10.4238/2012.october.15.5 · Cited by 11

Pathoadaptive Mutations in Uropathogenic Escherichia coli

Sokurenko, E. V. (2016) · Microbiology Spectrum · doi:10.1128/microbiolspec.uti-0020-2015 · Cited by 13

Distribution and characteristics of SGI1/PGI2 genomic island from Proteus strains in China

Xiao, T., Dai, H., Lu, B., Li, Z., Cai, H., Huang, Z., Kan, B., & Wang, D. (2019) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2019.02.027 · Cited by 11

Identifying genomic islands with deep neural networks

Assaf, R., Xia, F., & Stevens, R. L. (2021) · BMC Genomics · doi:10.1186/s12864-021-07575-5 · Cited by 11

Horizontal Gene Transfer in Planktonic and Biofilm Modes

Broszat, M., & Grohmann, E. (2014) · Springer series on biofilms · doi:10.1007/978-3-642-53833-9_5 · Cited by 12

Human genetic variation of medical significance

Kídd, K. K., & Kidd, J. R. (2007) · Oxford University Press eBooks · doi:10.1093/acprof:oso/9780199207466.003.0005 · Cited by 11

Disinfection and post-disinfection conditions drive bacterial and viral evolution across the environment and host

Zhou, Z., & Shuai, D. (2024) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2024.134811 · Cited by 10

Efficient degradation of cephalexin by newly isolated strain Brevundimonas sp. CEF1 and its biodegradation mechanisms

Kou, B., Wang, Y., Dong, Y., Wang, T., Wang, Z., Wang, J., Ma, D., & Dong, S. (2025) · Chemical Engineering Journal · doi:10.1016/j.cej.2025.167124 · Cited by 10

Comparative Genome Analysis of a Pathogenic Erysipelothrix rhusiopathiae Isolate WH13013 from Pig Reveals Potential Genes Involve in Bacterial Adaptions and Pathogenesis

Yang, L., Zhu, Y., Peng, Z., Ding, Y., Jie, K., Wang, Z., Peng, Y., Tang, X., Wang, X., Chen, H., et al. (2020) · Veterinary Sciences · doi:10.3390/vetsci7020074 · Cited by 10

Comparative Genomics Applied to Systematically Assess Pathogenicity Potential in Shiga Toxin-Producing Escherichia coli O145:H28

Carter, M. Q., Laniohan, N. S., Lo, C., & Chain, P. (2022) · Microorganisms · doi:10.3390/microorganisms10050866 · Cited by 10

Elucidating doxycycline biotransformation mechanism by Chryseobacterium sp. WX1: Multi-omics insights

Chen, X., Zhu, Y., Zheng, W., Yan, S., Li, Y., & Xie, S. (2024) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2024.133975 · Cited by 10

Magnetosomes in Magnetotactic Bacteria

Scheffel, A., & Schüler, D. (2006) · Microbiology monographs · doi:10.1007/7171_024 · Cited by 10

Fighting Outbreaks with Bacterial Genomics: Case Review and Workflow Proposal

Cheung, M. K., & Kwan, H. S. (2012) · Public Health Genomics · doi:10.1159/000342770 · Cited by 10

An Allele of an Ancestral Transcription Factor Dependent on a Horizontally Acquired Gene Product

Chen, H. D., Jewett, M. W., & Groisman, E. A. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1003060 · Cited by 10

Comparative Genomics of Methanopyrus sp. SNP6 and KOL6 Revealing Genomic Regions of Plasticity Implicated in Extremely Thermophilic Profiles

Yu, Z., Ma, Y., Zhong, W., Qiu, J., & Li, J. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01278 · Cited by 10

Comparative Genomic Analysis of Rhodococcus equi: An Insight into Genomic Diversity and Genome Evolution

Ying, J., Ye, J., Xu, T., Wang, Q., Bao, Q., & Li, A. (2019) · International Journal of Genomics · doi:10.1155/2019/8987436 · Cited by 10

Differential synthesis of novel small protein times Salmonella virulence program

Salvail, H., Choi, J., & Groisman, E. A. (2022) · PLoS Genetics · doi:10.1371/journal.pgen.1010074 · Cited by 10

An Introduction to Microbial Genomic Islands for Evolutionary Adaptation and Pathogenicity

Saini, A., Mani, I., Rawal, M. K., Verma, C., Singh, V., & Mishra, S. K. (2023) · Springer eBooks · doi:10.1007/978-981-19-9342-8_1 · Cited by 10

IGIPT - Integrated genomic island prediction tool

Jain, R., Ramineni, S., & Parekh, N. (2011) · Bioinformation · doi:10.6026/007/97320630007307 · Cited by 10

Heterogeneity of P seudomonas savastanoi populations infecting M yrtus communis in S ardinia ( I taly)

Cinelli, T., Marchi, G., Cimmino, A., Marongiu, R., Evidente, A., & Fiori, M. (2013) · Plant Pathology · doi:10.1111/ppa.12096 · Cited by 10

Horizontal Gene Transfer Between Bacteria Under Natural Conditions

Grohmann, E. (2011) · Springer eBooks · doi:10.1007/978-1-4419-7931-5_7 · Cited by 10

Systematic annotation of hyper-variability hotspots in phage genomes and plasmidsPreprint

Egorov, A. A., Hauryliuk, V., & Atkinson, G. C. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.10.15.618418 · Cited by 10

Regional variation and adaptive evolution in Bifidobacterium pseudocatenulatum: Insights into genomic and functional diversity in human gut

Wu, Q., Li, W., Kwok, L.-Y., Lv, H., Sun, J., & Sun, Z. (2024) · Food Research International · doi:10.1016/j.foodres.2024.114840 · Cited by 9

Genome-Based Analysis of Virulence Factors and Biofilm Formation in Novel P. aeruginosa Strains Isolated from Household Appliances

Kiel, A., Creutz, I., Rückert, C., Kaltschmidt, B. P., Hütten, A., Niehaus, K., Busche, T., Kaltschmidt, B., & Kaltschmidt, C. (2022) · Microorganisms · doi:10.3390/microorganisms10122508 · Cited by 9

Complex interactions between diverse mobile genetic elements drive the evolution of metal‐resistant bacterial genomes

Mahbub, K. R., Chénard, C., Batinovic, S., Petrovski, S., Lauro, F. M., Rahman, M. H., Megharaj, M., Franks, A. E., & Labbate, M. (2023) · Environmental Microbiology · doi:10.1111/1462-2920.16532 · Cited by 9

Genomic insights into mechanism underlying virulence variations between Vibrio mediterranei strains different in pathogenicity toward bivalves

Zhang, H., Zou, X., Hu, J., Liu, S., Fan, C., Dai, W., Lin, Z., & Xue, Q. (2025) · Aquaculture · doi:10.1016/j.aquaculture.2025.742524 · Cited by 9

Comprehensive genomic analysis of hypocholesterolemic probiotic Enterococcus faecium LR13 reveals unique proteins involved in cholesterol-assimilation

Aswal, M., Singhal, N., & Kumar, M. (2023) · Frontiers in Nutrition · doi:10.3389/fnut.2023.1082566 · Cited by 9

Integrative and conjugative elements of Pasteurella multocida : Prevalence and signatures in population evolution

He, J., Yang, Z., Wang, M., Jia, R., Chen, S., Liu, M., Zhao, X., Yang, Q., Wu, Y., Zhang, S., et al. (2024) · Virulence · doi:10.1080/21505594.2024.2359467 · Cited by 9

Genomes in Motion: Gene Transfer as a Catalyst for Genome Change

Lawrence, J. G., & Hendrickson, H. L. (2008) · Cambridge University Press eBooks · doi:10.1017/cbo9780511541520.002 · Cited by 9

Molecular detection of nine clinically important non-O157 Escherichia coli serogroups from raw sheep meat in Chaharmahal-va-Bakhtiari province, Iran

Hossein, T., Samaneh, M., Tajbakhsh, E., Farahmandi, S., Monji, H., & Farahmandi, K. (2014) · Meat Science · doi:10.1016/j.meatsci.2014.02.007 · Cited by 9

Microbiote et cancer colorectal : des bactéries génotoxiques dans le tractus intestinal

Nougayrède, J., & Oswald, É. (2011) · Bulletin de l Académie Nationale de Médecine · doi:10.1016/s0001-4079(19)31989-2 · Cited by 9

Geographic Impact on Genomic Divergence as Revealed by Comparison of Nine Citromicrobial Genomes

Zheng, Q., Liu, Y., Jeanthon, C., Zhang, R., Lin, W., Yao, J., & Jiao, N. (2016) · Applied and Environmental Microbiology · doi:10.1128/aem.02495-16 · Cited by 9

Genomic islands and the evolution of livestock-associatedStaphylococcus aureusgenomes

Rao, R. T., Sharma, S., Sivakumar, N., & Jayakumar, K. (2020) · Bioscience Reports · doi:10.1042/bsr20202287 · Cited by 9

The Virulence Plasmids of Shigella flexneri

Dorman, C. J. (2009) · Microbiology monographs · doi:10.1007/978-3-540-85467-8_7 · Cited by 9

Characterization of four novel genomic regions of uropathogenic Escherichia coli highly associated with the extraintestinal virulent phenotype: A jigsaw puzzle of genetic modules

Sorsa, L. J., Feldmann, F., Hildinger, K., Dufke, S., & Schubert, S. (2007) · International Journal of Medical Microbiology · doi:10.1016/j.ijmm.2006.11.007 · Cited by 10

Evidence of a large novel gene pool associated with prokaryotic genomic islands

Hsiao, W., Ung, K. S. E., Aeschliman, D. S., Bryan, J., Finlay, B. B., & Brinkman, F. S. L. (2005) · PLoS Genetics · doi:10.1371/journal.pgen.0010062.eor · Cited by 9

Eukaryote Evolution: The Importance of the Stem Group

Poole, A. M. (2010) · Wiley eBooks · doi:10.1002/9780470570418.ch4 · Cited by 10

Growth and Form: What is the Aim of Biomineralization?

Bäuerlein, E. (2007) · Wiley eBooks · doi:10.1002/9783527619443.ch1 · Cited by 9

Comparative genomics analysis of Salmonella Enteritidis isolated from clinical cases associated with chicken

Bu, X., Wu, Y., Hong, Y., Shi, J., Shao, J., Jia, K., Dong, Q., & Wang, X. (2024) · BMC Microbiology · doi:10.1186/s12866-024-03651-4 · Cited by 8

Genomic analysis reveals the population structure and antimicrobial resistance of avian Pasteurella multocida in China

Jiang, N., Chen, H., Cheng, L., Fu, Q., Liu, R., Liang, Q., Fu, G., Wan, C., & Huang, Y. (2023) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkad365 · Cited by 8

SMU_1361c regulates the oxidative stress response of Streptococcus mutans

Yu, S., 黄骏, Liu, Y., Liu, Y., Zhang, Q., Wang, Y., Gong, T., Ma, Q., Zou, J., & Li, Y. (2024) · Applied and Environmental Microbiology · doi:10.1128/aem.01871-23 · Cited by 8

The LAMP-CRISPR-Cas13a technique for detecting the CBASS mechanism of phage resistance in bacteria

Ortiz-Cartagena, C., Fernández-Grela, P., Armán, L., Blasco, L., Pablo‐Marcos, D., Bleriot, I., Fernández-García, L., Ibarguren-Quiles, C., Fernández-Cuenca, F., Barrio-Pujante, A., et al. (2025) · Frontiers in Microbiology · doi:10.3389/fmicb.2025.1550534 · Cited by 8

Accurate Localization of the Integration Sites of Two Genomic Islands at Single-Nucleotide Resolution in the Genome ofBacillus cereusATCC 10987

Zhang, R., & Zhang, C. (2008) · Comparative and Functional Genomics · doi:10.1155/2008/451930 · Cited by 8

Novel chromosome-encodederm(47) determinant responsible for constitutive MLSBresistance inHelcococcus kunzii

Guérin, F., Isnard, C., Bucquet, F., Fines-Guyon, M., Giárd, J.-C., Burrus, V., & Cattoir, V. (2016) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkw290 · Cited by 8

Involvement of a Novel TetR-Like Regulator (BdtR) of Bradyrhizobium diazoefficiens in the Efflux of Isoflavonoid Genistein

Han, F., He, X., Chen, W., Gai, H., Bai, X., He, Y., Takeshima, K., Ohwada, T., Wei, M., & Xie, F. (2020) · Molecular Plant-Microbe Interactions · doi:10.1094/mpmi-08-20-0243-r · Cited by 8

Whole Genome Sequencing of First Janibacter indicus Isolate in China Revealed Three Unique Genomic Islands Compared with Saprophytic Strains

Zhang, M., Wang, Z., Liang, Z., & Hu, N. (2021) · Infection and Drug Resistance · doi:10.2147/idr.s341591 · Cited by 8

How to Assess the Abundance and Diversity of Mobile Genetic Elements in Soil Bacterial Communities?

Smalla, K., & Heuer, H. (2006) · Springer eBooks · doi:10.1007/3-540-29449-x_13 · Cited by 8

Evolutionary Analysis of Synteny and Gene Fusion for Pyrimidine Biosynthetic Enzymes in Euglenozoa: An Extraordinary Gap between Kinetoplastids and Diplonemids

Makiuchi, T., Annoura, T., Hashimoto, T., Murata, E., Aoki, T., & Nara, T. (2008) · Protist · doi:10.1016/j.protis.2008.02.002 · Cited by 8

Genetic resources of nodule bacteria

Roumiantseva, M. L. (2009) · Russian Journal of Genetics · doi:10.1134/s1022795409090014 · Cited by 8

Abundant Oligonucleotides Common to Most Bacteria

Davenport, C., & Tümmler, B. (2010) · PLoS ONE · doi:10.1371/journal.pone.0009841 · Cited by 8

PathogenicStreptococcusstrains employ novel escape strategy to inhibit bacteriostatic effect mediated by mammalian peptidoglycan recognition protein

Wang, J., Feng, Y., Wang, C., Srinivas, S., Chen, C., Liao, H., He, E. W., Jiang, S., & Tang, J. (2017) · Cellular Microbiology · doi:10.1111/cmi.12724 · Cited by 8

Conjugative type IVb pilus recognizes lipopolysaccharide of recipient cells to initiate PAPI-1 pathogenicity island transfer in Pseudomonas aeruginosa

Hong, T. P., Carter, M. Q., Struffi, P., Casonato, S., Hao, Y., Lam, J. S., Lory, S., & Jousson, O. (2017) · BMC Microbiology · doi:10.1186/s12866-017-0943-4 · Cited by 8

Genetic and Biochemical Analysis of Magnetosome Formation in Magnetospirillum gryphiswaldense

Jogler, C., & Schüler, D. (2007) · Wiley eBooks · doi:10.1002/9783527619443.ch9 · Cited by 8

Genetic Recombination and Bacterial Population Structure

Martin, D. P., & Beiko, R. G. (2010) · Wiley eBooks · doi:10.1002/9780470600122.ch4 · Cited by 8

Comparative Genome Analysis of Lactobacillus plantarum GB-LP3 Provides Candidates of Survival-Related Genetic Factors

Jeon, S., Jung, J., Kim, K., Yoo, D., Lee, C., Kang, J., Cho, K., Kang, D.-K., Kwak, W., Yoon, S. H., et al. (2017) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2017.05.015 · Cited by 7

Adaptive evolution of Sphingopyxis sp. MC4 conferred degradation potential for persistent β- and δ-Hexachlorocyclohexane (HCH) isomers

Sharma, M., Singh, D. N., Uttam, G., Sharma, P., Meena, S. A., Verma, A. K., & Negi, R. K. (2023) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2023.132545 · Cited by 7

Genomic insights into multidrug resistant Escherichia coli from bovine mastitis in Bangladesh

Siddique, N., Arafat, K. Y., Gilman, M. A. A., Rahman, M. M., Das, Z. C., Islam, T., & Hoque, M. N. (2025) · BMC Microbiology · doi:10.1186/s12866-025-04514-2 · Cited by 7

DNA-Targeted Sonodynamic Activation Enhances Antibacterial Efficacy in Deep and Hypoxic Infections

Xu, Y., Yan, L., Li, C., Zhao, L., Mei, L., Zhang, J., Liang, S., Li, J., Zhang, R., Sun, Y., et al. (2026) · Journal of the American Chemical Society · doi:10.1021/jacs.6c06618 · Cited by 7

The Genomic-Driven Discovery of Glutarimide-Containing Derivatives from Burkholderia gladioli

Chen, H., Bai, X., Sun, T., Wang, X., Zhang, Y., Bian, X., & Zhou, H. (2023) · Molecules · doi:10.3390/molecules28196937 · Cited by 7

Synteruptor : mining genomic islands for non-classical specialized metabolite gene clusters

Haas, D., Barba, M., Vicente, C. M., Nezbedová, Š., Garénaux, A., Bury‐Moné, S., Lorenzi, J.-N., Hôtel, L., Laureti, L., Thibessard, A., et al. (2024) · NAR Genomics and Bioinformatics · doi:10.1093/nargab/lqae069 · Cited by 7

Prediction and Analysis in silico of Genomic Islands in Aeromonas hydrophila

Filho, A. C. D. S., Marchaukoski, J. N., Raittz, R. T., Pierri, C. R. D., Machado, D. D. J. S., Fadel-Picheth, C. M. T., & Picheth, G. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.769380 · Cited by 7

Evolution of pathogenic Escherichia coli

Chattopadhyay, S., & Sokurenko, E. V. (2013) · Elsevier eBooks · doi:10.1016/b978-0-12-397048-0.00003-6 · Cited by 8

Innovation for ascertaining genomic islands in PAO1 and PA14 of Pseudomonas aeruginosa

Song, L., & Zhang, X. (2009) · Chinese Science Bulletin · doi:10.1007/s11434-009-0598-0 · Cited by 7

Pathogenicity islands: the tip of the iceberg

Hentschel, U., & Hacker, J. H. (2001) · Microbes and Infection · doi:10.1016/s1286-4579(01)01410-1 · Cited by 139

Ecological fitness, genomic islands and bacterial pathogenicity

Hacker, J. H., & Carniel, É. (2001) · EMBO Reports · doi:10.1093/embo-reports/kve097 · Cited by 622

A Darwinian view of the evolution of microbes

Hacker, J. H., & Carniel, É. (2001) · Cited by 138

Pathogenicity Islands and the Evolution of Microbes

Hacker, J. H., & Kaper, J. B. (2000) · Annual Review of Microbiology · doi:10.1146/annurev.micro.54.1.641 · Cited by 1,298

Genomic Islands in Nutritional Fitness and Adaptation

Tirunagari, P., Choudhary, M., & Deb, S. (2023) · Springer eBooks · doi:10.1007/978-981-19-9342-8_7