The DOI matches its Crossref record; 43 of the 43 references it cites were found in a registry or an index.
A macrodomain-containing histone rearranges chromatin upon sensing PARP1 activation
Open accessAbstract
Poly-ADP-ribosylation is a post-translational modification catalyzed by PARP enzymes with roles in transcription and chromatin biology. Here we show that distinct macrodomains, including those of histone macroH2A1.1, are recruited to sites of PARP1 activation induced by laser-generated DNA damage. Chemical PARP1 inhibitors, PARP1 knockdown and mutation of ADP-ribose-binding residues in macroH2A1.1 abrogate macrodomain recruitment. Notably, histone macroH2A1.1 senses PARP1 activation, transiently compacts chromatin, reduces the recruitment of DNA damage factor Ku70-Ku80 and alters gamma-H2AX patterns, whereas the splice variant macroH2A1.2, which is deficient in poly-ADP-ribose binding, does not mediate chromatin rearrangements upon PARP1 activation. The structure of the macroH2A1.1 macrodomain in complex with ADP-ribose establishes a poly-ADP-ribose cap-binding function and reveals conformational changes in the macrodomain upon ligand binding. We thus identify macrodomains as modules that directly sense PARP activation in vivo and establish macroH2A histones as dynamic regulators of chromatin plasticity.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Citations
Cites
Coot : model-building tools for molecular graphics
Emsley, P., & Cowtan, K. (2004) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444904019158 · Cited by 30,571
MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
Davis, I., Leaver‐Fay, A., Chen, V. B., Block, J. N., Kapral, G. J., Wang, X., Murray, L. W., Arendall, W. B., Snoeyink, J. S., Richardson, J. S., et al. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm216 · Cited by 3,918
Kabsch, W. (1993) · Journal of Applied Crystallography · doi:10.1107/s0021889893005588 · Cited by 3,562
A pyramid approach to subpixel registration based on intensity
Thévenaz, P., Ruttimann, U. E., & Unser, M. A. (1998) · IEEE Transactions on Image Processing · doi:10.1109/83.650848 · Cited by 3,097
Poly(ADP-ribosyl)ation reactions in the regulation of nuclear functions
D’Amours, D., Desnoyers, S., D’Silva, I., & Poirier, G. G. (1999) · Biochemical Journal · doi:10.1042/bj3420249 · Cited by 1,819
Use of TLS parameters to model anisotropic displacements in macromolecular refinement
Winn, M., Isupov, M. N., & Murshudov, G. N. (2001) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444900014736 · Cited by 1,685
Likelihood-enhanced fast translation functions
McCoy, A. J., Grosse‐Kunstleve, R. W., Storoni, L. C., & Read, R. J. (2005) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444905001617 · Cited by 1,641
A Topoisomerase IIß-Mediated dsDNA Break Required for Regulated Transcription
Ju, B., Lunyak, V. V., Perissi, V., García-Bassets, I., Rose, D. W., Glass, C. K., & Rosenfeld, M. G. (2006) · Science · doi:10.1126/science.1127196 · Cited by 842
Nuclear ADP-Ribosylation Reactions in Mammalian Cells: Where Are We Today and Where Are We Going?
Hassa, P. O., Haenni, S. S., Elser, M., & Hottiger, M. O. (2006) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00040-05 · Cited by 719
Self-citationPavri, R., Zhu, B., Li, G., Trojer, P., Mandal, S. S., Shilatifard, A., & Reinberg, D. (2006) · Cell · doi:10.1016/j.cell.2006.04.029 · Cited by 708
Flagged first, then by citations
Cited by
Sorted by citations
Items 401–415 of 415
Repurposed macroH2A Chromatin Landscapes Guide Cellular ReprogrammingPreprint
Valakos, D., Kokkalis, A., Klagkou, E., Polyzos, A., Vatsellas, G., & Thanos, D. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2025.12.11.693653
Role of Poly-(ADP-ribose)-ylation signaling pathway in the chromatin remodeling after DNA damage
Sellou, H. (2016) · theses.fr (ABES) · doi:10.70675/c2e900e6zb02ez4a12zb3fazc621be99e611
Double strand break repair within constitutive heterochromatin
Tsouroula, A. (2017) · theses.fr (ABES) · doi:10.70675/6345eaa6z96c3z47bdz8b53zab2527ff8785
Multiscale analysis of poly-ADP-ribosylation dependent chromatin remodeling mechanisms at DNA breaks
Lebeaupin, T. (2017) · theses.fr (ABES) · doi:10.70675/e61e4cf3z6af7z4766z8412zde6fc6de0dbe
Inhibitors of the mRNA capping machinery and structural studies on macro domains from alphaviruses
Ramos, A. S. F. (2019) · theses.fr (ABES) · doi:10.70675/4cfb4e55zcee1z400az819ezc32e9d48c4c4
Caractérisation biochimique de macroH2A1.1 dans les cellules cancéreuses mammaires
Liénard-Lambour, B. (2016) · theses.fr (ABES) · doi:10.70675/780b4671z9e60z45d3zbf23z9cceb6bbf3f9
Ramos‐Morales, E. (2021) · theses.fr (ABES) · doi:10.70675/c6b28473zf6b6z4024z99bfz05629f0484d7
Repair of single-strand breaks during the cell cycle - saturation of repair capacity
Szelest, O., Hoang-Bujnowicz, A., Dobrucki, J. W., & Zarębski, M. (2026) · Nucleus · doi:10.1080/19491034.2026.2673717
Revealing ancient macroH2A features through in vivo analysis in the cricket Gryllus bimaculatus
Gonzalez-Sqalli, E., Caron, M. J., & Loppin, B. (2026) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2602208123
Variation, modification, and reorganization of broken chromatin
Humphrey, T. C., Downs, J. A., & Chambers, A. L. (2016) · Elsevier eBooks · doi:10.1016/b978-0-443-19001-8.00014-3
Regulation of chromatin structure and function by adenosine diphosphate (ADP)-ribosylation
Huang, D., Edwards, A. D., & Kraus, W. L. (2026) · Elsevier eBooks · doi:10.1016/b978-0-443-19001-8.00007-6
Epigenetics in development, disease, and therapy: from mechanisms to clinical interventions
Ren, Y., Yang, L., Fei, B., Guo, R., Huang, J., Xu, Z., Wang, R., Zhang, P., Cao, D., Chen, P., et al. (2026) · Science China Life Sciences · doi:10.1007/s11427-025-3356-1
Metadata
- Authors
- Timinszky, G., Till, S., Hassa, P. O., Hothorn, M., Kustatscher, G., Nijmeijer, B., Colombelli, J., Altmeyer, M., Stelzer, E. H. K., Scheffzek, K., Hottiger, M. O., & Ladurner, A. G.
- Affiliations
- European Molecular Biology Laboratory (DE)
- Salk Institute for Biological Studies (US)
- University of Zurich (CH)
- Corresponding author
- Ladurner, Andreas G
- ORCID
- Venue
- Nature Structural & Molecular Biology
- Published
- 2009-08-13
- Volume
- 16
- Issue
- 9
- Pages
- 923-929
- ISSN
- 1545-9985 (ISSN-L)
- 1545-9993
- OpenAlex
- W2019637656
- Cited by
- 416
- References
- 43
- Citations by year
- 2026: 8 · 2025: 6 · 2024: 13 · 2023: 9 · 2022: 25 · 2021: 22 · 2020: 25 · 2019: 14 · 2018: 27 · 2017: 32 · 2016: 28 · 2015: 24 · 2014: 32 · 2013: 44 · 2012: 44
- FWCI
- 14.24
- Type
- journal article
- Language
- en
- Open access
- green
- doi.org
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Structural & Molecular Biology (publishedVersion)
- PubMed (publishedVersion)
- Zurich Open Repository and Archive (University of Zurich) (acceptedVersion)
- Zurich Open Repository and Archive (University of Zurich) (submittedVersion)
- Zurich Open Repository and Archive (University of Zurich)
- Funders
- European Molecular Biology Laboratory
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Health Sciences › Medicine › Oncology › PARP inhibition in cancer therapy
- Keywords
- macroH2A1.1, macroH2A1.2, macrodomain, PARP1, poly(ADP-ribosyl)ation, chromatin condensation, ADP-ribose binding, Ku70/Ku80, γH2AX, DNA damage response, laser-induced DNA damage, chromatin plasticity
- MeSH terms
- Poly (ADP-Ribose) Polymerase-1, Chromatin, DNA Damage, Enzyme Activation, HeLa Cells, Histones, Humans, Models, Molecular, Poly Adenosine Diphosphate Ribose, Poly(ADP-ribose) Polymerases, Protein Binding, RNA Processing, Post-Transcriptional, Protein Structure, Tertiary, Amino Acid Motifs, Protein Structure, Quaternary
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review