Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks

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Items 601–670 of 670

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  11. PKA prevents resection of DNA double strand breaks and favor non-homologous end-joining
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  16. The 7SK small nuclear ribonucleoprotein links the cell responses to transcription and replication stress by promoting replication fork reversal and homologous recombination
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  17. A novel class of non-coding variants driving DNA double-strand breaks is associated with complex genetic diseases
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  19. PKA prevents the resection of DNA double-strand breaks and favours nonhomologous end-joining
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  20. Additional file 3 of Genome-wide identification of replication fork stalling/pausing sites and the interplay between RNA Pol II transcription and DNA replication progression
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  21. Additional file 2 of Genome-wide identification of replication fork stalling/pausing sites and the interplay between RNA Pol II transcription and DNA replication progression
    Rojas, Patricia, Wang, Jianming, Guglielmi, Giovanni, Martina Mustè Sadurnì, Lucas Pavlou, Geoffrey Ho Duen Leung, Rajagopal, Vijay, Fabian Spill, Marco Saponaro · 2024 · Figshare
  22. Additional file 1 of Genome-wide identification of replication fork stalling/pausing sites and the interplay between RNA Pol II transcription and DNA replication progression
    Rojas, Patricia, Wang, Jianming, Guglielmi, Giovanni, Martina Mustè Sadurnì, Lucas Pavlou, Geoffrey Ho Duen Leung, Rajagopal, Vijay, Fabian Spill, Marco Saponaro · 2024 · Figshare
  23. Additional file 5 of Genome-wide identification of replication fork stalling/pausing sites and the interplay between RNA Pol II transcription and DNA replication progression
    Rojas, Patricia, Wang, Jianming, Guglielmi, Giovanni, Martina Mustè Sadurnì, Lucas Pavlou, Geoffrey Ho Duen Leung, Rajagopal, Vijay, Fabian Spill, Marco Saponaro · 2024 · Figshare
  24. Additional file 4 of Genome-wide identification of replication fork stalling/pausing sites and the interplay between RNA Pol II transcription and DNA replication progression
    Rojas, Patricia, Wang, Jianming, Guglielmi, Giovanni, Martina Mustè Sadurnì, Lucas Pavlou, Geoffrey Ho Duen Leung, Rajagopal, Vijay, Fabian Spill, Marco Saponaro · 2024 · Figshare
  25. SFPQ Promotes Homologous Recombination via mRNA Stabilization of RAD51 and Its Paralogs
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  29. Rôle du complexe de cohésion sur la ligature d'extrémités d'ADN non homologues et la stabilité du génome
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  49. Étude du rôle des protéines Ribonucléases H dans la réponse cellulaire au stress réplicatif
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  51. Interplay between facultative heterochromatin and the DNA double-strand break repair response
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  66. Variation, modification, and reorganization of broken chromatin
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  67. ALYREF binds to poly-ADP-ribose at double strand breaks impairing repair in tumoral cells
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  68. BindingDB Entry 50015118: Discovery of a First-in-Class Inhibitor of the Histone Methyltransferase SETD2 Suitable for Preclinical Studies.
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  69. Tubulin acetylation regulates nuclear shape fluctuations and DNA repair
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