Imprinting of the immune system by the microbiota early in life

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells

Furusawa, Y., Obata, Y., Fukuda, S., Endo, T. A., Nakato, G., Takahashi, D., Nakanishi, Y., Uetake, C., Kato, K., Kato, T., et al. (2013) · Nature · doi:10.1038/nature12721 · Cited by 5,549

The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic T reg Cell Homeostasis

Smith, P. M., Howitt, M. R., Panikov, N., Michaud, M., Gallini, C. A., Bohlooly-Y, M., Glickman, J. N., & Garrett, W. S. (2013) · Science · doi:10.1126/science.1241165 · Cited by 5,413

Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour

Cryan, J. F., & Dinan, T. G. (2012) · Nature Reviews Neuroscience · doi:10.1038/nrn3346 · Cited by 4,572

Gut Microbiota Metabolism of Dietary Fiber Influences Allergic Airway Disease and Hematopoiesis

Trompette, A., Gollwitzer, E. S., Yadava, K., Sichelstiel, A. K., Sprenger, N., Ngom-Bru, C., Blanchard, C., Junt, T., Nicod, L. P., Harris, N. L., et al. (2014) · Nature Medicine · doi:10.1038/nm.3444 · Cited by 2,862

Trained immunity: A program of innate immune memory in health and– disease

Netea, M. G., Joosten, L. A. B., Latz, E., Mills, K. H. G., Natoli, G., Stunnenberg, H. G., O’Neill, L. A. J., & Xavier, R. J. (2016) · Science · doi:10.1126/science.aaf1098 · Cited by 2,768

The Effect of Infections on Susceptibility to Autoimmune and Allergic Diseases

Bach, J. (2002) · New England Journal of Medicine · doi:10.1056/nejmra020100 · Cited by 2,723

The Placenta Harbors a Unique Microbiome

Aagaard, K., Ma, J., Antony, K. M., Ganu, R., Petrosino, J., & Versalovic, J. (2014) · Science Translational Medicine · doi:10.1126/scitranslmed.3008599 · Cited by 2,494

How colonization by microbiota in early life shapes the immune system

Gensollen, T., Iyer, S. S., Kasper, D. L., & Blumberg, R. S. (2016) · Science · doi:10.1126/science.aad9378 · Cited by 2,044

Reciprocal T H 17 and Regulatory T Cell Differentiation Mediated by Retinoic Acid

Mucida, D., Park, Y., Kim, G., Turovskaya, O., Scott, I., Kronenberg, M., & Cheroutre, H. (2007) · Science · doi:10.1126/science.1145697 · Cited by 1,982

Microbial Exposure During Early Life Has Persistent Effects on Natural Killer T Cell Function

Olszak, T., An, D., Zeissig, S., Vera, M. P., Richter, J., Franke, A., Glickman, J. N., Siebert, R., Baron, R. M., Kasper, D. L., et al. (2012) · Science · doi:10.1126/science.1219328 · Cited by 1,661

Global climate change, diet, and the complex relationship between human host and microbiome: Towards an integrated picture

Catania, F., Baedke, J., Fábregas‐Tejeda, A., Delgado, A. N., Vitali, V., & Long, L. A. N. (2021) · BioEssays · doi:10.1002/bies.202100049 · Cited by 19

Clostridioides difficile and the Microbiota Early in Life

Semon, A., Keenan, O., & Zackular, J. P. (2021) · Journal of the Pediatric Infectious Diseases Society · doi:10.1093/jpids/piab063 · Cited by 18

Anti-fungal T cell responses in the lung and modulation by the gut-lung axis

Scheffold, A., & Bächer, P. (2020) · Current Opinion in Microbiology · doi:10.1016/j.mib.2020.06.006 · Cited by 18

Prenatal Maternal Antibiotics Treatment Alters the Gut Microbiota and Immune Function of Post-Weaned Prepubescent Offspring

Madany, A. M., Hughes, H. K., & Ashwood, P. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms232112879 · Cited by 17

The Role of Early Life Gut Mycobiome on Child Health

Rodriguez, K. A., Gurung, M., Talatala, R., Rearick, J. R., Ruebel, M. L., Stephens, K., & Yeruva, L. (2024) · Advances in Nutrition · doi:10.1016/j.advnut.2024.100185 · Cited by 17

Deep Investigating the Changes of Gut Microbiome and Its Correlation With the Shifts of Host Serum Metabolome Around Parturition in Sows

Fu, H., He, M., Wu, J., Zhou, Y., Ke, S., Chen, Z., Liu, Q., Liu, M., Jiang, H., Huang, L., et al. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.729039 · Cited by 17

The microbiota in respiratory tract infections: from association to intervention

Koenen, M. H., Piters, W. A. A. D. S., Bogaert, D., & Verhagen, L. M. (2022) · Current Opinion in Infectious Diseases · doi:10.1097/qco.0000000000000826 · Cited by 16

Microbial network signatures of early colonizers in infants with eczema

Huang, L., Pan, G., Feng, Y., Fan, Z., Ma, K., Wang, R., Wang, G., Huang, G., Huang, S., Hou, Y., et al. (2023) · iMeta · doi:10.1002/imt2.90 · Cited by 16

Human Respiratory and Gut Microbiomes—Do They Really Contribute to Respiratory Health?

Durack, J., & Christophersen, C. T. (2020) · Frontiers in Pediatrics · doi:10.3389/fped.2020.00528 · Cited by 18

Ethanol: striking the cardiovascular system by harming the gut microbiota

da Silva, C. B. P., Elias‐Oliveira, J., McCarthy, C. G., Wenceslau, C. F., Carlos, D., & Tostes, R. C. (2021) · American Journal of Physiology-Heart and Circulatory Physiology · doi:10.1152/ajpheart.00225.2021 · Cited by 15

Vertical Transfer of Maternal Gut Microbes to Offspring of Western Diet-Fed Dams Drives Reduced Levels of Tryptophan Metabolites and Postnatal Innate Immune Response

Sugino, K. Y., Janssen, R. C., McMahan, R. H., Zimmerman, C., Friedman, J. E., & Jonscher, K. R. (2024) · Nutrients · doi:10.3390/nu16121808 · Cited by 15

Importance of crosstalk between the microbiota and the neuroimmune system for tissue homeostasis

Li, K., Ly, K., Mehta, S. Y., & Braithwaite, A. W. (2022) · Clinical & Translational Immunology · doi:10.1002/cti2.1394 · Cited by 16

Nature and nurture: understanding phenotypic variation in inborn errors of immunity

Similuk, M. N., & Kuijpers, T. W. (2023) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2023.1183142 · Cited by 17

The Role of Intestinal Microbiota and Immune System Interactions in Autoimmune Diseases

Yurtseven, B., Aydemir, E., & Ayaz, F. (2025) · ImmunoTargets and Therapy · doi:10.2147/itt.s569016 · Cited by 19

The social microbiome: The missing mechanism mediating the sociality-fitness nexus?

Baniel, A., & Charpentier, M. J. E. (2024) · iScience · doi:10.1016/j.isci.2024.109806 · Cited by 14

The Early Appearance of Asthma and Its Relationship with Gut Microbiota: A Narrative Review

Suárez-Martínez, C., Santaella, M., Yagüe‐Guirao, G., García‐Marcos, L., Ros, G., & Martínez‐Graciá, C. (2024) · Microorganisms · doi:10.3390/microorganisms12071471 · Cited by 17

Pathogenic mechanisms in the evolution of food allergy

Martínez‐Blanco, M., Mukhatayev, Z., & Chatila, T. A. (2024) · Immunological Reviews · doi:10.1111/imr.13398 · Cited by 16

Immunomodulation by the Commensal Microbiome During Immune-Targeted Interventions: Focus on Cancer Immune Checkpoint Inhibitor Therapy and Vaccination

Reens, A. L., Cabral, D. J., Liang, X., Norton, J. E., Therien, A. G., Hazuda, D. J., & Swaminathan, G. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.643255 · Cited by 14

Understanding exposures and latent disease risk within the National Institute of Environmental Health Sciences Superfund Research Program

Amolegbe, S. M., Carlin, D. J., Henry, H. F., Heacock, M. L., Trottier, B. A., & Suk, W. A. (2022) · Experimental Biology and Medicine · doi:10.1177/15353702221079620 · Cited by 13

Developmental changes in the rules for B cell selection

Vergani, S., & Yuan, J. (2021) · Immunological Reviews · doi:10.1111/imr.12949 · Cited by 13

Historical Perspective: Metchnikoff and the intestinal microbiome

Mowat, A. M. (2021) · Journal of Leukocyte Biology · doi:10.1002/jlb.4ri0920-599 · Cited by 16

Maturation of the Visceral (Gut-Adipose-Liver) Network in Response to the Weaning Reaction versus Adult Age and Impact of Maternal High-Fat Diet

Guzzardi, M. A., Rosa, F. L., Campani, D., Insilla, A. C., Sena, V. D., Panetta, D., Brunetto, M. R., Bonino, F., Collado, M. C., & Iozzo, P. (2021) · Nutrients · doi:10.3390/nu13103438 · Cited by 13

Role of bacteria and microbial metabolites in immune modulation during early life

Oldereid, T. S., Jiang, X., Nordhus, K. S., Ponzetta, A., Bjørnholt, J. V., Björkström, N. K., Melum, E., & Rasmussen, H. (2023) · Scandinavian Journal of Immunology · doi:10.1111/sji.13336 · Cited by 12

Isolation, phytochemistry, characterization, biological activity, and application of Morinda officinalis How oligosaccharide: a review

Yue, J., Xia, W., Wang, Y., Zhang, Y., Zhang, Y., Li, Y., Wang, L., Li, C., Li, T., & Fu, X. (2023) · Journal of Pharmacy and Pharmacology · doi:10.1093/jpp/rgad096 · Cited by 12

The relationship between pinworm (Trypanoxyuris) infection and gut bacteria in wild black howler monkeys (Alouatta pigra)

Martínez‐Mota, R., Righini, N., Mallott, E. K., Gillespie, T. R., & Amato, K. R. (2021) · American Journal of Primatology · doi:10.1002/ajp.23330 · Cited by 12

Assessing the safety of bioactive ingredients in infant formula that affect the immune system: recommendations from an expert panel

Callahan, E. A., Chatila, T. A., Deckelbaum, R. J., Field, C. J., Greer, F. R., Hernell, O., Järvinen, K. M., Kleinman, R. E., Milner, J. D., Neu, J., et al. (2021) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqab346 · Cited by 12

Amoxicillin does not affect the development of cow’s milk allergy in a Brown Norway rat model

Locke, A., Larsen, J. M., Graversen, K., Licht, T. R., Bahl, M. I., & Bøgh, K. L. (2022) · Scandinavian Journal of Immunology · doi:10.1111/sji.13148 · Cited by 12

Towards the generation of gnotobiotic larvae as a tool to investigate the influence of the microbiome on the development of the amphibian immune system

Miller, A. J., Gass, J. T., Jo, M. C., Bishop, L., Petereit, J., Woodhams, D. C., & Voyles, J. (2023) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2022.0125 · Cited by 11

Gut Microbial Intersections with Human Ecology and Evolution

Amato, K. R., & Carmody, R. N. (2023) · Annual Review of Anthropology · doi:10.1146/annurev-anthro-052721-085122 · Cited by 11

Pathways of atopic disease and neurodevelopmental impairment: assessing the evidence for infant antibiotics

Volker, E. A., Tessier, C., Rodriguez, N., Yager, J. Y., & Kozyrskyj, A. L. (2022) · Expert Review of Clinical Immunology · doi:10.1080/1744666x.2022.2101450 · Cited by 11

Dirty mice join the immunologist's toolkit

Kuypers, M., Despot, T., & Mallevaey, T. (2021) · Microbes and Infection · doi:10.1016/j.micinf.2021.104817 · Cited by 9

The multisensory regulation of unconventional T cell homeostasis

Darrigues, J., Almeida, V., Conti, E., & Ribot, J. C. (2022) · Seminars in Immunology · doi:10.1016/j.smim.2022.101657 · Cited by 10

Microbial Interventions to Improve Neonatal Gut Health

Nakandalage, R., Guan, L. L., & Malmuthuge, N. (2023) · Microorganisms · doi:10.3390/microorganisms11051328 · Cited by 10

Akkermansia muciniphila Promotes SIgA Production and Alters the Reactivity Toward Commensal Bacteria in Early-Weaned Piglets

Jiang, Q., Zhu, X., Sun, L., Xie, C., Wang, X., Ma, L., & Yan, X. (2024) · Journal of Nutrition · doi:10.1016/j.tjnut.2024.11.002 · Cited by 11

Birth Order, Caesarean Section, or Daycare Attendance in Relation to Child- and Adult-Onset Type 1 Diabetes: Results from the German National Cohort

Tanoey, J., Bächle, C., Brenner, H., Deckert, A., Fricke, J., Günther, K., Karch, A., Keil, T. O. P., Kluttig, A., Leitzmann, M. F., et al. (2022) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph191710880 · Cited by 11

Stochastic variational variable selection for high-dimensional microbiome data

Dang, T., Kumaishi, K., Usui, E., Kobori, S., Sato, T., Toda, Y., Yamasaki, Y., Tsujimoto, H., Ichihashi, Y., & Iwata, H. (2022) · Microbiome · doi:10.1186/s40168-022-01439-0 · Cited by 9

Characterizing the prevalence of Fusobacterium necrophorum subsp. necrophorum, Fusobacterium necrophorum subsp. funduliforme, and Fusobacterium varium in bovine and ovine semen, bovine gut, and vagino-uterine and fetal microbiota using targeted culturing and qPCR

Kilama, J., Dahlen, C. R., Abbasi, M., Shi, X., Nagaraja, T. G., Crouse, M. S., Cushman, R. A., Snider, A. P., McCarthy, K. L., Caton, J. S. S., et al. (2025) · Microbiology Spectrum · doi:10.1128/spectrum.03145-24 · Cited by 9

From gut to gamete: how the microbiome influences fertility and preconception health

Munyoki, S. K., Vukmer, N. A., Rios, J. M., Kallen, A. N., & Jašarević, E. (2025) · Microbiome · doi:10.1186/s40168-025-02230-7 · Cited by 8

Maternal obesity alters human milk oligosaccharides content and correlates with early acquisition of late colonizers in the neonatal gut microbiome

Corona-Cervantes, K., Urrutia-Baca, V. H., Gámez-Valdez, J. S., Jiménez-López, B., Rodríguez-Gutiérrez, N. A., Caraza, K. L. C., Espiricueta-Candelaria, F., Salas-Villalobos, U. A., Ramos‐Parra, P. A., Uribe, J. A. G., et al. (2026) · Gut Microbes · doi:10.1080/19490976.2025.2607043 · Cited by 11

Early-life microbiota skews long-term gene expression and chromatin states of bone marrow hematopoietic precursors

Kabil, A., Cait, A., Reynolds, L. A., Chopra, S., Bilenky, M., Moksa, M., Li, Y., Cait, J., Hernaez, D. C., Scott, R. W., et al. (2026) · Cell Reports · doi:10.1016/j.celrep.2025.116871 · Cited by 8

Impact of perinatal administration of probiotics on immune cell composition in neonatal mice

Rühle, J., Schwarz, J., Dietz, S., Rückle, X., Schoppmeier, U., Lajqi, T., Poets, C. F., Gille, C., & Köstlin‐Gille, N. (2024) · Pediatric Research · doi:10.1038/s41390-024-03029-2 · Cited by 9

Milk and bugs educate infant immune systems

Spreckels, J. E., & Zhernakova, A. (2021) · Immunity · doi:10.1016/j.immuni.2021.07.013 · Cited by 8

Practical and Robust NMR-Based Metabolic Phenotyping of Gut Health in Early Life

Bervoets, L., Ippel, H., Smolinska, A., van Best, N., Savelkoul, P. H. M., Mommers, M., & Penders, J. (2021) · Journal of Proteome Research · doi:10.1021/acs.jproteome.1c00617 · Cited by 8

A Non-Invasive Neonatal Signature Predicts Later Development of Atopic Diseases

Sérémé, Y., Michel, M., Mezouar, S., Guindo, C. O., Kaba, L., Grine, G., Mura, T., Mège, J., Tran, T.-A., Corbeau, P., et al. (2022) · Journal of Clinical Medicine · doi:10.3390/jcm11102749 · Cited by 8

A Water-Soluble Polysaccharide from the Fibrous Root of Anemarrhena asphodeloides Bge. and Its Immune Enhancement Effect in Vivo and in Vitro

Huang, Q., Wang, J., Zong, R., Wu, D., & Jin, C. (2022) · Evidence-based Complementary and Alternative Medicine · doi:10.1155/2022/8723119 · Cited by 9

Amphibians as a model to study the role of immune cell heterogeneity in host and mycobacterial interactions

Paiola, M., Dimitrakopoulou, D., Pavelka, M. S., & Robert, J. (2022) · Developmental & Comparative Immunology · doi:10.1016/j.dci.2022.104594 · Cited by 9

Supplementation With Human Foods Affects the Gut Microbiota of Wild Howler Monkeys

Amato, K. R., Back, J. P., Sardaro, M. L. S., & Bicca‐Marques, J. C. (2025) · American Journal of Primatology · doi:10.1002/ajp.70029 · Cited by 7

Coevolutionary interplay: Helminths-trained immunity and its impact on the rise of inflammatory diseases

Silva, E. A. C., Puyssegur, J., & Errasti, A. E. (2025) · eLife · doi:10.7554/elife.105393 · Cited by 12

Multiple low dose streptozotocin‐induced diabetes as a model for studying autoimmune diabetes in humans

Koprivica, I., Stanisavljević, S., Mićanović, D., Stojanović, I., & Miljković, D. M. (2025) · Animal Models and Experimental Medicine · doi:10.1002/ame2.70050 · Cited by 7

Bacterial communities co-develop with respiratory immunity early in life, linking dysbiosis to systemic monocyte signature and wheezing

Pattaroni, C., Macowan, M. G., Chatzis, R., Iacono, G., Cardwell, B., Gore, M. L., Čustović, A., Shields, M. D., Power, U. F., Grigg, J., et al. (2025) · Science Advances · doi:10.1126/sciadv.adw1410 · Cited by 7

T-bet-expressing Tr1 cells driven by dietary signals dominate the small intestinal immune landscape

Ansaldo, E., Yong, D., Carrillo, N., McFadden, T. E., Abid, M., Corral, D., Rivera, C. A., Farley, T. K., Bouladoux, N. J., Gribonika, I., et al. (2026) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2520747122 · Cited by 9

The gut-lung axis in childhood asthma: from early-life programming to microbiome-informed precision medicine—a narrative review

Mo, M., Chen, L., Wang, Y., Lin, X., Li, H., Chen, B., Yuan, J., & Tao, E. (2026) · Frontiers in Immunology · doi:10.3389/fimmu.2026.1814901 · Cited by 7

Eosinophil-derived neurotoxin levels can predict allergic disease development and atopic march in children

Callaway, Z., & Kim, C. K. (2025) · Korean Journal of Pediatrics · doi:10.3345/cep.2024.01382 · Cited by 7

Prebiotic Supplementation during Lactation Affects Microbial Colonization in Postnatal-Growth-Restricted Mice

Marousez, L., Tran, L. C., Micours, E., Antoine, M., Gottrand, F., Lésage, J., & Ley, D. (2023) · Nutrients · doi:10.3390/nu15122771 · Cited by 7

Multi-omics analysis reveals interactions between host and microbes in Bama miniature pigs during weaning

Ma, W., Li, Y., Hu, Y., Liu, X., Guo, Z., Zhong, B., Qiu, H., & Li, J. (2024) · Frontiers in Microbiology · doi:10.3389/fmicb.2024.1482925 · Cited by 6

Ochratoxin A induces immunotoxicity by targeting Annexin A1 mediated neutrophil apoptosis in zebrafish

Zheng, Y., Liu, Y., Tian, J., Liu, S., Ma, G., Xie, Y., Zheng, C., & Wu, Z. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1542964 · Cited by 6

The association between the adenoid microbiome and chronic otitis media with effusion in children differs according to age

Jo, J.-W., Kim, S. K., Byun, J. Y., Hong, S. M., & Kim, B. S. (2025) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2025.1660939 · Cited by 5

Accelerating discovery of cancer causes for prevention in the era of rising early-onset cancers

Shi, M., Patti, G. J., Gunter, M. J., Govindan, R., Lansdorp‐Vogelaar, I., Wang, T., Townsend, J. P., Colditz, G. A., Belkaid, Y., & Cao, Y. (2026) · Cell · doi:10.1016/j.cell.2026.03.019 · Cited by 7

Dendritic Cells and Cryptosporidium: From Recognition to Restriction

Saraav, I., & Sibley, L. D. (2023) · Microorganisms · doi:10.3390/microorganisms11041056 · Cited by 5

Monobutyrin Can Regulate the Gut Microbiota, Which Is Beneficial for the Development of Intestinal Barrier Function and Intestinal Health in Weaned Mice

Wang, H., Qiu, J., Zhou, M., Luo, Y., Li, X., & Wang, M. (2024) · Nutrients · doi:10.3390/nu16132052 · Cited by 5

Perinatal treatment of parents with the broad-spectrum antibiotic enrofloxacin aggravates contact sensitivity in adult offspring mice

Kowalczyk, P. K., Strzępa, A., & Szczepanik, M. (2021) · Pharmacological Reports · doi:10.1007/s43440-021-00217-3 · Cited by 5

Per Os to Protection – Targeting the Oral Route to Enhance Immune-mediated Protection from Disease of the Human Newborn

Verhasselt, V., Marchant, A., & Kollmann, T. R. (2024) · Journal of Molecular Biology · doi:10.1016/j.jmb.2024.168718 · Cited by 6

Supplemental Feeding Implementation: Window of Opportunities for the Intestinal Microbiota Development and Immune Responses Modulation

Belyaeva, I. A., Namazova-Baranova, L. S., Петровна, Б. Е., Shukenbaeva, R. A., & Turti, T. V. (2024) · Вопросы современной педиатрии · doi:10.15690/vsp.v22i6.2663 · Cited by 5

Impact of maternal obesity and mode of delivery on the newborn skin and oral microbiomes

Seifert, A., Ingram, K., Eko, E. N., Nunziato, J. D., Ahrens, M. L., & Howell, B. (2025) · Journal of Medical Microbiology · doi:10.1099/jmm.0.002000 · Cited by 4

Review: In vitro and ex vivo models advancing the study of host-microbiota interactions across organ systems in farm animals

Goetz, C., Payros, D., Knudsen, C., Grundy, M.-L. M., Lacroix‐Lamandé, S., Lalmanach, A.-C., Wiedemann, A., Piriou-Guzylack, L., Archer, F., Descamps, D., et al. (2026) · animal · doi:10.1016/j.animal.2026.101810 · Cited by 4

Early flora colonization affects intestinal immunoglobulin G uptake in piglets, which may be mediated by NF-κB-FcRn pathway

Peng, F., Zhang, H., He, X., & Song, Z. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1136513 · Cited by 5

Embryonic injection of Lactobacillus plantarum PA01 alters the microbial diversity in the gastrointestinal tract of the broilers before and after hatching

Guo, W., Zhou, J., Liu, Y., Bai, J., Zhu, Y., Yang, X., & Yang, X. (2023) · Poultry Science · doi:10.1016/j.psj.2023.102764 · Cited by 4

Solubilized β-Glucan Supplementation in C57BL/6J Mice Dams Augments Neurodevelopment and Cognition in the Offspring Driven by Gut Microbiome Remodeling

Katimbwa, D. A., Kim, Y., Kim, M. J., Jeong, M., & Lim, J. (2024) · Foods · doi:10.3390/foods13193102 · Cited by 5

The Development of the Gut Microbiota in Childhood and Its Distortion by Lifestyle Changes

Penders, J., & van Best, N. (2022) · Progress in inflammation research · doi:10.1007/978-3-030-91051-8_7 · Cited by 4

Household conditions modulate associations between cesarean delivery and childhood growth

Veile, A. J., Kramer, K. L., & Otárola‐Castillo, E. (2022) · American Journal of Biological Anthropology · doi:10.1002/ajpa.24563 · Cited by 3

The ontogeny of immune tolerance: a model of early-life secretory IgA - gut microbiome interactionsPreprint

Tepekule, B., Lim, A. I., & Metcalf, C. J. E. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.05.20.594845 · Cited by 4

“Microbial and immune modulation by 2’-fucosyllactose supplementation during gestation: a strategy to prevent food allergies”

Brosseau, C., Rousseaux, A., Romancer, M. L., Ropers, M., Lollier, V., de Carvalho, M., Barbarot, S., & Bodinier, M. (2025) · Gut Microbes · doi:10.1080/19490976.2025.2523813 · Cited by 3

Targeting the Microbiota Reverses C‐Section‐Induced Effects on Intestinal Permeability, Microbiota Composition, and Amygdala Gene Expression in the Mouse

Silva, A. P. V., Moloney, G. M., Sequeira, A. M., Liber, M., Bastiaanssen, T. F. S., Rea, K., Fitzgerald, P., Golubeva, A. V., Rodriguez‐Aburto, M., Renes, I. B., et al. (2025) · Neurogastroenterology & Motility · doi:10.1111/nmo.70107 · Cited by 3

Weaning age impacts intestinal stabilization of jejunal intraepithelial T lymphocytes and mucosal microbiota in pigs

Wiarda, J., Watkins, H. R., Monson, M. S., Anderson, C. L., & Loving, C. L. (2025) · BMC Veterinary Research · doi:10.1186/s12917-025-04850-5 · Cited by 3

Disruption of IgA-mediated aggregation at weaning favors mucus encroachment by commensal bacteria

Simpson, K., Baillou, R., Roy, T. L., Ranson, A., Vázquez-Gómez, M., Sterlin, D., Gorochov, G., Beaumont, M., Clément, K., & Clément, É. (2026) · npj Biofilms and Microbiomes · doi:10.1038/s41522-026-00946-4 · Cited by 3

Long-term inhibition of protease hypersensitivity by initial immunological cross-regulation and epigenetic memory in lung stromal cells

Ryu, J., Blondeau, A., Mirabeau, O., Carlo, S. E. D., Baillet, V., Hardy, D., Pasquali, C., Peduto, L., & Eberl, G. (2026) · Nature Immunology · doi:10.1038/s41590-026-02439-0 · Cited by 3

Evolution and development of innate immune memory

Divangahi, M., & Kaufmann, E. (2026) · Science Immunology · doi:10.1126/sciimmunol.aeb7976 · Cited by 7

HUMAN MICROBIOTA AND DISEASES OF CIVILIZATION: SEARCHING WAY OUT

Saubenova, M., Oleinikova, Y., ЧИЖАЕВА, А. В., АЛЫБАЕВА, А. Ж., Aitzhanova, A., Amangeldi, A., & Potoroko, I. Y. (2022) · МИКРОБИОЛОГИЯ ЖӘНЕ ВИРУСОЛОГИЯ · doi:10.53729/mv-as.2022.03.01 · Cited by 3

Region-specific establishment of bacterial communities in the small intestine of neonatal calves from birth

Malmuthuge, N., Chen, Y., Liang, G., Widenmann, A., & Guan, L. L. (2024) · Animal Nutriomics · doi:10.1017/anr.2024.4 · Cited by 4

Nurturing futures through the maternal microbiome

Pala, R., & Kenny, K. (2024) · Sociology of Health & Illness · doi:10.1111/1467-9566.13828 · Cited by 5

B-1 Cells Carry the Memory of Neonatal Immune Imprinting

Vergani, S., & Yuan, J. (2020) · Immunity · doi:10.1016/j.immuni.2020.06.018 · Cited by 3

Agaricus subrufescens fermented rye affects the development of intestinal microbiota, local intestinal and innate immunity in suckling-to-nursery pigs

Wen, C., Geervliet, M., de Vries, H., Fabà, L., den Hil, P. J. R.-V., Skovgaard, K., Savelkoul, H. F. J., Schols, H. A., Wells, J. M., Tijhaar, E. J., et al. (2023) · Animal Microbiome · doi:10.1186/s42523-023-00244-w · Cited by 3

Management of asthma using probiotics

Garg, A. P., Ateeq, A., Bisht, N., & Patil, B. (2024) · doi:10.37349/eaa.2024.00026 · Cited by 4

Prevalence of neutropenia in the U.S. among reproductive-aged women: a population-based analysis of NHANES 2013–2020

Chen, J., Song, S., & Li, Y. (2025) · BMC Public Health · doi:10.1186/s12889-025-21330-5 · Cited by 3

Probiotics in Allergic Rhinitis Management: Is There a Positioning for Them?

Ciprandi, G., & Tosca, M. A. (2022) · Allergies · doi:10.3390/allergies2030011 · Cited by 6

A window of opportunity : Modulation of the porcine gut microbiota and immune system by feed additives in early life

Geervliet, M. (2021) · doi:10.18174/553257 · Cited by 2

Modulation of adaptive immune responses by Akkermansia muciniphila is restricted to an early life window in NOD micePreprint

Maddux, S., Lubin, J., Green, J., Flores, J. N., Rozich, I., Duranova, T., Planet, P. J., & Silverman, M. A. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.08.16.504185 · Cited by 2

Early-life exposures to specific commensal microbes prevent type 1 diabetesPreprint

Green, J., Deschaine, B. M., Lubin, J., Flores, J. N., Maddux, S., Duranova, T., Grimes, L. P., Planet, P. J., Eisenlohr, L. C., & Silverman, M. A. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.02.15.580579 · Cited by 3

Parity influences postpartum adaptations in the maternal gut microbiota

Jarmukhanov, Z., Vinogradova, E. B., Mukhanbetzhanov, N., Kozhakhmetov, S., Khassenbekova, D., & Kushugulova, A. R. (2025) · Scientific Reports · doi:10.1038/s41598-025-02013-y · Cited by 3

Intestinal barrier alterations in mice following fecal microbiota transplant from children of IBD-affected mothers

Wieringa, J. W., Binyamin, D., Jankelowitz, I. A., Schweitzer, R., Turjeman, S. C., Khatib, S., Esser, M. J., van der Woude, C. J., Fuhler, G. M., & Koren, O. (2025) · Med · doi:10.1016/j.medj.2025.100915 · Cited by 2

Maternal and infant gut microbiome

Wang, H., Tin, F., Chen, H., Jiao, F., Wu, M., Sun, S., Lin, L., Li, D., Zheng, H., Niu, Z., et al. (2026) · iMeta · doi:10.1002/imt2.70151 · Cited by 2

Vaccination with an HIV T-Cell Immunogen (HTI) Using DNA Primes Followed by a ChAdOx1-MVA Boost Is Immunogenic in Gut Microbiota-Depleted Mice despite Low IL-22 Serum Levels

Elizalde‐Torrent, A., Borgognone, A., Casadellà, M., Romero-Martín, L., Escribà, T., Parera, M., Rosales-Salgado, Y., Dı́az, J., Català‐Moll, F., Noguera-Julián, M., et al. (2023) · Vaccines · doi:10.3390/vaccines11111663 · Cited by 2

Early-life vitamin A treatment rescues neonatal infection-induced durably impaired tolerogenic properties of celiac lymph nodes

Zou, M., Pezoldt, J., Mohr, J., Philipsen, L., Leufgen, A., Cerovic, V., Wiechers, C., Pils, M. C., Ortiz, D., Hao, L., et al. (2024) · Cell Reports · doi:10.1016/j.celrep.2024.114153 · Cited by 2

An in vitro model system for testing chemical effects on microbiome-immune interactions – examples with BPX and PFAS mixtures

Fischer, F., Pierzchalski, A., Riesbeck, S., Aldehoff, A. S., Castañeda-Monsalve, V., Haange, S., von Bergen�, M., Rolle-Kampczyk, U. E., Jehmlich, N., Zenclussen, A. C., et al. (2024) · Frontiers in Immunology · doi:10.3389/fimmu.2024.1298971 · Cited by 2

Development and clinical assessment of a novel probiotic candy in the prevention of respiratory infections in asthmatic children

Tafrishi, R., Ahanchian, H., Jafari, S. A., Pahlevanlo, A., Kianifar, H. R., Kiani, M. A., Moazzen, N., Sadeghi, T., & Sly, P. D. (2025) · World Allergy Organization Journal · doi:10.1016/j.waojou.2024.101023 · Cited by 2

Effect of prenatal antibiotics on breast milk and neonatal IgA and microbiome: a case-control translational study protocol

Pietrasanta, C., Ronchi, A., Carlosama, C., Lizier, M., Silvestri, A., Fornasa, G., Melacarne, A., Mihula, M., D’Ambrosi, F., Lutterotti, M., et al. (2025) · Pediatric Research · doi:10.1038/s41390-025-03922-4 · Cited by 2

Gut microbiota and other factors associated with increased T cell regulation in HIV-exposed uninfected infants

Johnson, M. J., Lazarus, S. K., Bennett, A., Tovar-Salazar, A., Robertson, C. E., Kofonow, J. M., Li, S., McCollister, B. D., Nunes, M. C., Madhi, S. A., et al. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1533003 · Cited by 2

Microbiome and the Immune System

Cortes‐Perez, N. G. (2021) · Elsevier eBooks · doi:10.1016/b978-0-12-819265-8.00034-6 · Cited by 2

Functional maturation of the gut microbiota at weaning is influenced by maternal environment in pigletsPreprint

Beaumont, M., Cauquil, L., Bertide, A., Ahn, I., Barilly, C., Gil, L., Canlet, C., Zemb, O., Pascal, G., Samson, A., et al. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.04.02.022913 · Cited by 2

Interaction between Gut Microbiota and Central and Enteric Nervous Systems: The Gut–Brain Axis Concept

Arbab, M. H. (2023) · Wiley eBooks · doi:10.1002/9781119904786.ch15 · Cited by 2

The microbiota, a necessary element of immunity

Eberl, G. (2018) · Comptes Rendus Biologies · doi:10.1016/j.crvi.2018.03.003 · Cited by 17

Early life microbiome influences on development of the mucosal innate immune system

Ignácio, A., Czyz, S., & McCoy, K. D. (2024) · Seminars in Immunology · doi:10.1016/j.smim.2024.101885 · Cited by 55

The early life education of the immune system: Moms, microbes and (missed) opportunities

Jain, N. (2020) · Gut Microbes · doi:10.1080/19490976.2020.1824564 · Cited by 119

Chapter 6 The intestinal microbiota and the child’s immune system

Jenmalm, M. C., & Prescott, S. L. (2017) · Wageningen Academic Publishers eBooks · doi:10.3920/978-90-8686-839-1_6 · Cited by 3

A mother's touch: microbial guardians of early immune imprinting

Zeng, M. Y., & Brown, J. A. (2025) · Trends in Immunology · doi:10.1016/j.it.2025.09.008 · Cited by 3