Nogo-B promotes angiogenesis and improves cardiac repair after myocardial infarction via activating Notch1 signaling

Should We STOP Angiotensin Converting Enzyme Inhibitors/Angiotensin Receptor Blockers in Advanced Kidney Disease?

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A new role for Nogo as a regulator of vascular remodeling

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The Notch pathway controls fibrotic and regenerative repair in the adult heart

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Quantifying the roles of cell motility and cell proliferation in a circular barrier assay

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Novel insights into the differential functions of Notch ligands in vascular formation

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Downregulation of dynamin-related protein 1 contributes to impaired autophagic flux and angiogenic function in senescent endothelial cells

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An endoplasmic reticulum protein, Nogo‐B, facilitates alcoholic liver disease through regulation of kupffer cell polarization

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Notch1 in Bone Marrow–Derived Cells Mediates Cardiac Repair After Myocardial Infarction

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Local administration of porcine immunomodulatory, chemotactic and angiogenic extracellular vesicles using engineered cardiac scaffolds for myocardial infarction

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In VivoPericyte–Endothelial Cell Interaction during Angiogenesis in Adult Cardiac and Skeletal Muscle

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Intramyocardial Delivery of Notch Ligand-Containing Hydrogels Improves Cardiac Function and Angiogenesis Following Infarction

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Notch signaling activation contributes to cardioprotection provided by ischemic preconditioning and postconditioning

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Reticulon 4B (Nogo-B) is a novel regulator of hepatic fibrosis

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Endothelial Nogo-B regulates sphingolipid biosynthesis to promote pathological cardiac hypertrophy during chronic pressure overload

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NUMB enhances Notch signaling by repressing ubiquitination of NOTCH1 intracellular domain

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Transcription Factor RBPJ as a Molecular Switch in Regulating the Notch Response

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The Notch pathway: a novel target for myocardial remodelling therapy?

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AAV Vectors Expressing LDLR Gain-of-Function Variants Demonstrate Increased Efficacy in Mouse Models of Familial Hypercholesterolemia

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Notch Signaling in Ischemic Damage and Fibrosis: Evidence and Clues from the Heart

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Combining neuropeptide Y and mesenchymal stem cells reverses remodeling after myocardial infarction

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A simple non-perturbing cell migration assay insensitive to proliferation effects

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Epithelial reticulon 4B (Nogo-B) is an endogenous regulator of Th2-driven lung inflammation

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Notch1 Mediates Preconditioning Protection Induced by GPER in Normotensive and Hypertensive Female Rat Hearts

Rocca, C., Femminò, S., Aquila, G., Granieri, M. C., Francesco, E. M. D., Pasqua, T., Rigiracciolo, D. C., Fortini, F., Cerra, M. C., Maggiolini, M., et al. (2018) · Frontiers in Physiology · doi:10.3389/fphys.2018.00521 · Cited by 45 · see citing works

Uncoupling protein 3 mediates H2O2 preconditioning-afforded cardioprotection through the inhibition of MPTP opening

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Secreted frizzled-related protein 2, a novel mechanism to induce myocardial ischemic protection through angiogenesis

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ALDOA protects cardiomyocytes against H/R-induced apoptosis and oxidative stress by regulating the VEGF/Notch 1/Jagged 1 pathway

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Clinical efficacy and safety of angiogenesis inhibitors: sex differences and current challenges

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Nogo-C regulates cardiomyocyte apoptosis during mouse myocardial infarction

Shi, J. Y., Qiao, X., Ye, J., Fang, X., Xu, C., Cao, Y., & Zheng, M. (2016) · Cell Death and Disease · doi:10.1038/cddis.2016.331 · Cited by 32 · see citing works

Curcumin attenuates hypoxia/reoxygenation‑induced cardiomyocyte injury by downregulating Notch signaling

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The vascular delta-like ligand-4 (DLL4)-Notch4 signaling correlates with angiogenesis in primary glioblastoma: an immunohistochemical study

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Notch signaling promotes angiogenesis and improves cardiac function after myocardial infarction

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Inhibition of Nogo-B promotes cardiac hypertrophy via endoplasmic reticulum stress

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The Vital Roles of Mesenchymal Stem Cells and the Derived Extracellular Vesicles in Promoting Angiogenesis After Acute Myocardial Infarction

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Activated Notch1 reduces myocardial ischemia reperfusion injury in vitro during ischemic postconditioning by crosstalk with the RISK signaling pathway

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Endothelial lipid phosphate phosphatase-3 deficiency that disrupts the endothelial barrier function is a modifier of cardiovascular development

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3,5-Bis(2,4-Difluorobenzylidene)-4-piperidone, a Novel Compound That Affects Pancreatic Cancer Growth and Angiogenesis

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Nogo-C regulates post myocardial infarction fibrosis through the interaction with ER Ca2+ leakage channel Sec61α in mouse hearts

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Nitric oxide scavenging causes remodeling of the endoplasmic reticulum, Golgi apparatus and mitochondria in pulmonary arterial endothelial cells

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Nogo‐B promotes tumor angiogenesis and provides a potential therapeutic target in hepatocellular carcinoma

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Nogo-A regulates myogenesis via interacting with Filamin-C

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Different expressions of Nogo-B1 and Nogo-B2 in mouse heart microvascular endothelial cell dysfunction induced by lysophosphatidylcholine

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Clinical Implications of Increased Nogo-B Levels in Patients With Acute Coronary Syndromes and Stable Angina Pectoris

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Nogo‐B expression, in arterial intima, is impeded in the early stages of atherosclerosis in humans

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[Effects of Fluoxetine on Nogo Expression and Collagen Production with Decrease of Pulmonary Artery Pressure in Rats with Right Ventricular Failure.]

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Strategic incorporation of metal ions in bone regenerative scaffolds: multifunctional platforms for advancing osteogenesis

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Acute Myocardial Infarction: Molecular Pathogenesis, Diagnosis, and Clinical Management

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Oligodendrocyte Maturation Alters the Cell Death Mechanisms That Cause Demyelination

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Identifying fibrogenic cells following salivary gland obstructive injury

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A BODIPY-Naphtholimine-BF2 Dyad for Precision Photodynamic Therapy, Targeting, and Dual Imaging of Endoplasmic Reticulum and Lipid Droplets in Cancer

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Kaempferol promotes angiogenesis through HIF-1α/VEGF-A/Notch1 pathway in ischemic stroke rats

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Caspase-2 kills cells with extra centrosomes

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Danhong injection combined with tPA protects the BBB through Notch-VEGF signaling pathway on long-term outcomes of thrombolytic therapy

Chen, S., Zhang, J., Li, M., Zhou, J., & Zhang, Y. (2022) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2022.113288 · Cited by 17 · see citing works

MYC acetylated lysine residues drive oncogenic cell transformation and regulate select genetic programs for cell adhesion-independent growth and survivalPreprint

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Trimethylamine- N -Oxide Affects Cell Type–Specific Pathways and Networks in Mouse Aorta to Promote Atherosclerotic Plaque Vulnerability

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Biofunctionalization of Stem Cell Scaffold for Osteogenesis and Bone Regeneration

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Cross-species conservation in the regulation of parvalbumin by perineuronal nets

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Short-term S100A8/A9 Blockade Promotes Cardiac Neovascularization after Myocardial Infarction

Mareş, R. G., Șuică, V. I., Uyy, E., Boteanu, R. M., Ivan, L., Cocuz, I. G., Sabău, A.-H., Yadav, V., Szabó, I. A., Cotoi, O. S., et al. (2024) · Journal of Cardiovascular Translational Research · doi:10.1007/s12265-024-10542-6 · Cited by 12 · see citing works

Aberrant expression of collagen type X in solid tumor stroma is associated with EMT, immunosuppressive and pro-metastatic pathways, bone marrow stromal cell signatures, and poor survival prognosis

Youth, E. H. H., Famili-Youth, A., Yang, D., Siddique, A., Wu, E. Y., Liu, W., Resnick, M. B., Chen, Q., & Brodsky, A. S. (2025) · BMC Cancer · doi:10.1186/s12885-025-13641-y · Cited by 11 · see citing works

Assessing platelet-derived extracellular vesicles for potential as therapeutic targets in cardiovascular diseases

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Unveiling the modulation of Nogo receptor in neuroregeneration and plasticity: Novel aspects and future horizon in a new frontier

Dave, B. P., Shah, K. C., Shah, M. B., Chorawala, M. R., Patel, V. N., Shah, P. A., Shah, G. B., & Dhameliya, T. M. (2023) · Biochemical Pharmacology · doi:10.1016/j.bcp.2023.115461 · Cited by 10 · see citing works

Human Satellite 3 DNA encodes megabase-scale transcription factor binding platformsPreprint

Franklin, J. M., Dubocanin, D., Chittenden, C., Barillas, A., Lee, R. J., Ghosh, R. P., Gerton, J. L., Guan, K., & Altemose, N. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.10.22.616524 · Cited by 9 · see citing works

S-Propargyl-Cysteine Ameliorates Peripheral Nerve Injury through Microvascular Reconstruction

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Mitigation of Doxorubicin Cardiotoxicity With Synergistic miRNA Combinations Identified Using Combinatorial Genetics en masse (CombiGEM)

Higashikuni, Y., Platt, C., Hastings, M. H., Chen, W. C. W., Guerra, J. R. B., Tokuyama, T., Torizal, F. G., Liu, W., Obana, T., Bayer, A. L., et al. (2025) · JACC CardioOncology · doi:10.1016/j.jaccao.2025.03.007 · Cited by 8 · see citing works

Machine learning-guided deconvolution of plasma protein levels

Pietzner, M., Beuchel, C. F., Demircan, K., Anton, J. H., Zeng, W., Römisch‐Margl, W., Yasmeen, S., Uluvar, B., Zoodsma, M., Koprulu, M., et al. (2025) · Molecular Systems Biology · doi:10.1038/s44320-025-00158-6 · Cited by 8 · see citing works

Altered Fhod3 expression involved in progressive high-frequency hearing loss via dysregulation of actin polymerization stoichiometry in the cuticular plate

Boussaty, E. C., Ninoyu, Y., de Andrade, L. R., Li, Q., Takeya, R., Sumimoto, H., Ohyama, T., Wahlin, K. J., Manor, U., & Friedman, R. A. (2024) · PLoS Genetics · doi:10.1371/journal.pgen.1011211 · Cited by 8 · see citing works

Complex changes in serum protein levels in COVID-19 convalescents

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Cirrhosis Promotes Cardiac Fibrosis Development by Inhibiting Notch1 in Cardiac Fibroblasts

Sun, H., Song, K., Zhou, Z.-Y., Tu, B., Zhou, Y., Lin, L.-C., Liu, Z., Liu, Z., Sha, J.-M., Shi, Y. X., et al. (2025) · JACC Basic to Translational Science · doi:10.1016/j.jacbts.2024.11.015 · Cited by 7 · see citing works

Cap-independent co-expression of dsRNA-sensing and NF-κB pathway inhibitors enables controllable self-amplifying RNA expression with reduced immunotoxicityPreprint

Lim, T. K. Y., Ritoux, A., Paine, L. W., Ferguson, L., Abdul, T., Grundy, L. J., & Smith, E. S. J. (2025) · eLife · doi:10.7554/elife.105978.3 · Cited by 8 · see citing works

High sensitivity cameras can lower spatial resolution in high-resolution optical microscopy

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Molecular insights into the role of desmin intermediate filament network in chromatin landscape, cardiomyocyte differentiation, and maturation

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Oncogenic Mutant p53 Sensitizes Non–Small Cell Lung Cancer Cells to Proteasome Inhibition via Oxidative Stress–Dependent Induction of Mitochondrial Apoptosis

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Endothelial PRMT7 prevents dysfunction, promotes revascularization and enhances cardiac recovery post-myocardial infarction

Tran, T. T. V., Zhang, Y., Wei, S., Lee, J., Jeong, Y., Vuong, T. A., Lee, S.-J., Ryu, D., Bae, G., & Kang, J. (2025) · Experimental & Molecular Medicine · doi:10.1038/s12276-025-01517-x · Cited by 6 · see citing works

Siponimod As a Novel Inhibitor of Retinal Angiogenesis: In Vitro and In Vivo Evidence of Therapeutic Efficacy

Alshaikh, R. A., Zaki, R. G. E., Din, R. A. S. E., Ryan, K. B., & Waeber, C. (2023) · Journal of Pharmacology and Experimental Therapeutics · doi:10.1124/jpet.122.001529 · Cited by 6 · see citing works

Salvianic acid A sodium facilitates cardiac microvascular endothelial cell proliferation by enhancing the hypoxia‐inducible factor‐1 alpha/vascular endothelial growth factor signalling pathway post‐myocardial infarction

Liu, J., Wu, F. H., Li, Z., Zheng, S., Huang, Y.-Q., & Chen, H. (2024) · Clinical and Experimental Pharmacology and Physiology · doi:10.1111/1440-1681.13855 · Cited by 6 · see citing works

A Bioinert Hydrogel Framework for Precision 3D Cell Cultures: Advancing Automated High‐Content and High‐Throughput Drug Screening

Jeon, H., Zanon, T. T. M., Carpenter, J., Ilias, A., Colón, Y. J., & Wang, Y. (2025) · Small Science · doi:10.1002/smsc.202400440 · Cited by 6 · see citing works

Regulatory Start-Stop Elements in 5’ Untranslated Regions Pervasively Modulate TranslationPreprint

Rendleman, J., Haizel, S. A., Wu, S., Liu, J., Ge, X., Zou, H., Mohammad, M. P., Pressler, M., Maity, S., Hronová, V., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.07.26.453809 · Cited by 5 · see citing works

Salmonella injectisome penetration of macrophages triggers rapid translation of transcription factors and protection against cell deathPreprint

Wood, G., Johnson, R., Powell, J., Bryant, O., Lastovka, F., Brember, M. P., Tourlomousis, P., Carr, J., Bryant, C., & Chung, B. (2024) · bioRxiv · doi:10.1101/2023.07.21.550113 · Cited by 4 · see citing works

Integrative Genetic, Proteogenomic, and Multi-omics Analyses Reveal Sex-Biased Causal Genes and Drug Targets in Alzheimer’s DiseasePreprint

Cook, N., Yang, C., Zeng, Y., Sivasankaran, S. K., Song, S., Talozzi, L., Western, D., Yang, C., Liu, Y., Guen, Y. L., et al. (2025) · medRxiv · doi:10.1101/2025.10.31.25339089 · Cited by 10 · see citing works

Nanoparticles For Rescue: Innovative Therapeutic Strategy For Cardiac Repair After Myocardial Infarction

Mao, Y.-A., Wang, R., Shi, X., Jin, Y., Pan, Z., Chatterjee, E., Li, G., Chen, X., Wang, H., Jiang, J., et al. (2025) · Journal of Cardiovascular Translational Research · doi:10.1007/s12265-025-10660-9 · Cited by 5 · see citing works

Targeting the Notch signaling pathway: molecular mechanisms and therapeutic strategies for cardiac repair after myocardial infarction

Zhang, Z., Xie, F.-Q., Cheng, J., Liu, X., Wang, X., Long, J., Feng, Q.-M., & Yuan, D. (2025) · Frontiers in Cardiovascular Medicine · doi:10.3389/fcvm.2025.1669362 · Cited by 5 · see citing works

Spatially Resolved Mapping of Monoacylglycerol Lipase Activity in the Brain

van der Vliet, D., Klinkenberg, A. X. Y., Platte, R., Higgins, K., Prokop, S., Huizenga, M. C. W., Kraaijevanger, L., van Egmond, N., Straub, V. M., Kole, M. H. P., et al. (2025) · ACS Chemical Neuroscience · doi:10.1021/acschemneuro.5c00638 · Cited by 4 · see citing works

Infusible Extracellular Matrix Biomaterial Enhances Cell‐Specific Pro‐Repair Responses Following Acute Myocardial Infarction

Mesfin, J. M., Chen, A., Lyons, Q. P., Nguyen, M. B., Karkanitsa, M. L., Yu, J. D., Ninh, V. K., Gardner, E. E., Wong, E. G., Paleti, S. N., et al. (2025) · Advanced Healthcare Materials · doi:10.1002/adhm.202503469 · Cited by 4 · see citing works

Quantitative Analysis of Nonhistone Lysine Methylation Sites and Lysine Demethylases in Breast Cancer Cell Lines

Berryhill, C. A., Evans, T. N., Doud, E. H., Smith-Kinnaman, W. R., Hanquier, J. N., Mosley, A. L., & Cornett, E. M. (2025) · Journal of Proteome Research · doi:10.1021/acs.jproteome.4c00685 · Cited by 4 · see citing works

A hybrid machine learning framework for functional annotation of mitochondrial glutathione transport and metabolism proteins in cancers

Kennedy, L., Sandhu, J. K., Harper, M.-E., & Cuperlovic-Culf, M. (2025) · BMC Bioinformatics · doi:10.1186/s12859-025-06051-1 · Cited by 4 · see citing works

The role of rare genetic variants enrichment in epilepsies of presumed genetic etiologyPreprint

Bundalian, L., Su, Y.-Y., Chen, S., Velluva, A., Kirstein, A. S., Garten, A., Biskup, S., Battke, F., Lal, D., Heyne, H., et al. (2023) · medRxiv · doi:10.1101/2023.01.17.23284702 · Cited by 4 · see citing works

FICD deficiency protects mice from hypertrophy-induced heart failure via BiP-mediated activation of the UPR ER and ER-phagyPreprint

Lacy, S. M., Taubitz, R. J., Urban, N. D., Turowski, S. N., Smith, E. D., Helms, A. S., Michele, D. E., & Truttmann, M. C. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.05.28.596287 · Cited by 4 · see citing works

Orally Delivered Milk-Derived Nanovesicles Loaded with Connexin 43 Peptides for Targeted Cardiac Ischemia-Reperfusion TherapyPreprint

Marsh, S. R., Amin, M. R., Toldo, S. A., Beard, C. E., Dogan, A. B., Mezzaroma, E., Andres, E., Stout, R. F., Bannon, M. S., Payne, L. B., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.01.01.630994 · Cited by 4 · see citing works

T Cell Dysfunction in Cutaneous Leishmaniasis at Single-Cell ResolutionPreprint

Avila, J. P., Singh, Y., de Souza, F. M., de Assunção, S. F., Damasceno, S., Guedes, H. L. D. M., Cunha, T. M., Filho, R. B., Silva, J. S., & Nakaya, H. I. (2025) · medRxiv · doi:10.1101/2025.02.21.25322565 · Cited by 4 · see citing works

INPP5D/SHIP1 regulates endo-lysosomal function and cargo-selective phagocytosis in human microglia

Terzioglu, G., Karp, E. S., Heuer, S. E., Chadarevian, J. P., Ahsan, F. M., Haage, V. C., Davtyan, H., Fogo, G. M., Curle, A. J., Ashour, N., et al. (2025) · doi:10.1101/2025.10.27.684632 · Cited by 3 · see citing works

Integration of elemental imaging and spatial transcriptomic profiling for proof-of-concept metals-based pathway analysis of colon tumor microenvironment

Srivastava, A., Shaik, N., Lu, Y., Chan, M., Diallo, A., Zavras, J. P., Han, S., Punshon, T., Jackson, B. P., Vahdat, L. T., et al. (2025) · Metallomics · doi:10.1093/mtomcs/mfaf034 · Cited by 3 · see citing works

Notch signaling pathway and heart development, congenital heart disease, and myocardial regeneration

Liu, Y., Wang, X., Tao, X., Zhang, H., Liu, B., Li, Y., Wang, H., Luo, H.-M., Lv, H.-L., & Li, P. (2026) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2025.1731605 · Cited by 3 · see citing works

Low-Strength Type I Interferon Signaling Promotes CAR T-cell Treatment Efficacy

Tang, E., Hu, Y., Cao, G., Nguyen, D.-T., Asby, N. W., Aboelella, N. S., Ruiz, H. A., Cai, X., Zhang, W., Zhao, Y. Q., et al. (2026) · Cancer Immunology Research · doi:10.1158/2326-6066.cir-25-0691 · Cited by 3 · see citing works

Parkinson’s disease LRRK2 mutations dysregulate iron homeostasis and promote oxidative stress and ferroptosis in human neurons and astrocytes

Mamais, A., Batchelor, R. D., Aravindraja, C., Ladd, T. B., Shute, A. J., Subrahmanian, N., Maio, N., Vulpe, C. D., & LaVoie, M. J. (2026) · Molecular Neurodegeneration · doi:10.1186/s13024-026-00979-5 · Cited by 3 · see citing works

Strengthening Antisense Oligonucleotide-Mediated Anti-Tumor Immunity via Metal–Organic Framework Nanoparticles

Nowak, J. A., Cho, E., Davis, M. A., Zheng, S., Bell, L., Sha, F., Magdalenski, J. S., Lui, A., Napoli, M., Falahat, R., et al. (2026) · Nano Letters · doi:10.1021/acs.nanolett.5c05579 · Cited by 3 · see citing works

Nogo-B Silencing Expedites the Senescence of Platelet-Derived Growth Factor-BB-Induced Human Hepatic Stellate Cells Via Autophagy

Gao, L., Zhuang, Y., & Liu, Z. (2024) · Molecular Biotechnology · doi:10.1007/s12033-024-01179-6 · Cited by 3 · see citing works

Stem cell-specific NF-κB is required for stem cell survival and epithelial regeneration upon intestinal damage

Joly, A., Ferguson, M., Shin, M., & Foley, E. (2025) · Biology Open · doi:10.1242/bio.062025 · Cited by 3 · see citing works

Replication stress alters CENP-A nucleosome stability during S phasePreprint

Lee, A. S., Huang, C., Su, T., Bodner, J., Kelleher, N. L., & Foltz, D. R. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.05.23.655122 · Cited by 3 · see citing works

Cardioprotective effect of Yiqi Huoxue decoction on post-myocardial infarction injury mediated by Ca2+ flux through MAMs

Li, Y., Du, T., Zhang, Y., Lu, Y., Li, X., Xie, W., & Guo, S. (2025) · Frontiers in Cardiovascular Medicine · doi:10.3389/fcvm.2025.1596757 · Cited by 2 · see citing works

Anemoside B4 improves cardiac function after myocardial infarction by regulating HTR2A/ERK pathway

Lv, M., Sun, Q., Yi-lin, Y., & Yu, D. (2025) · International Immunopharmacology · doi:10.1016/j.intimp.2025.115394 · Cited by 2 · see citing works

Longitudinal analysis of retinal cell state transitions in RB1-deficient retinal organoids reveals the nascent cone precursors are the earliest cell-origin of human retinoblastoma

Ye, K., Wang, Y., Xu, P., Xie, B., Wu, S., Zhang, W., Gao, G., Zheng, D., Song, X., Zhang, S., et al. (2026) · Cell Death and Disease · doi:10.1038/s41419-025-08191-x · Cited by 2 · see citing works

Src promotes tumor cell invasion by hijacking the translation machineries

Bonnard, B., Chatefau, A., Dourthe, C., Di-Tommaso, S., Dupuy, J., Mahouche, I., Solórzano, J., Fevrier, L., Bras, M. L., Raymond, A., et al. (2026) · Cell Reports · doi:10.1016/j.celrep.2026.116989 · Cited by 2 · see citing works

Reducing Nogo-B Improves Hepatic Fibrosis by Inhibiting BACe1-Mediated Autophagy

Gao, L., Zhuang, Y., & Liu, Z. (2024) · Tissue Engineering and Regenerative Medicine · doi:10.1007/s13770-024-00641-5 · Cited by 2 · see citing works

Biomarker and clinical data–based predictor tool (MAUXI) for ultrafiltration failure and cardiovascular outcome in peritoneal dialysis patients: a retrospective and longitudinal study

Arriero‐País, E. M., Bajo, M. A., Arrojo-García, R., Sandoval, P., Gónzalez-Mateo, G. T., Albar-Vizcaíno, P., del Peso-Gilsanz, G., Ossorio-González, M., Majano, P. L., & López‐Cabrera, M. (2025) · BMJ Health & Care Informatics · doi:10.1136/bmjhci-2024-101138 · Cited by 2 · see citing works

Topical Administration of Novel FKBP12 Ligand MP-004 Improves Retinal Function and Structure in Retinitis Pigmentosa Models

Lara-López, A., González-Imaz, K., Rodríguez-Hidalgo, M., Sarasola-Gastesi, M., Escudero-Arrarás, L., Navarro, S. M., de la Villa, P., Sagartzazu‐Aizpurua, M., Miranda, J. I., Aizpurua, J. M., et al. (2025) · Investigative Ophthalmology & Visual Science · doi:10.1167/iovs.66.3.56 · Cited by 2 · see citing works

Neurite outgrowth inhibitor-B in physiology and disease

Tan, W., Long, D. A., & Gnudi, L. (2025) · Physiological Reviews · doi:10.1152/physrev.00052.2024 · Cited by 2 · see citing works

Resistance patterns in drug-adapted cancer cell lines reflect the complex evolution in clinical tumoursPreprint

Grimsley, H. E., Antczak, M., Reddin, I. G., McLaughlin, K.-M., Nist, A., Mernberger, M., Stiewe, T., Fenton, T. R., Speidel, D., Harper-Wynne, C. L., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.01.20.576412 · Cited by 2 · see citing works

UHRF1 is critical for tumor-promoting inflammation and tumorigenesis in retinoblastomaPreprint

Gu, Y., Suarez-Pizarro, M., Chen, C. C., Wu, J., Zocchi, L., Suh, S., Smith, P. J., Cruz, S. M., Tinoco, R., & Benavente, C. A. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.03.02.641083 · Cited by 2 · see citing works

CRIS: A Centralized Resource for High-Quality RNA Structure and Interaction Data in the AI EraPreprint

Lee, W. H., Dharmawan, C., Li, K., Bai, J., Solanki, P., Sharma, A., Zhang, M., & Lu, Z. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.05.05.652292 · Cited by 2 · see citing works

A Unified Framework for Model-Informed and Agentic RNA DesignPreprint

Riley, A. T., Vlasity, M., Becicka, W. M., Huang, J., Pang, S., Wong, W. W., Grinstaff, M. W., & Green, A. A. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.06.17.659751 · Cited by 3 · see citing works

Metabolic and transcriptional adaptations to phagocytosis sustain microglia functionality and regenerative propertiesPreprint

Márquez-Ropero, M., Valero, J., Cuesta‐Puente, X., Márquez-Galera, Á., Pereira‐Iglesias, M., Louail, A., González-Domínguez, M., Beccari, S., Lopez-Murillo, L., Juan, A. S., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.09.18.676800 · Cited by 2 · see citing works

USP7 inhibition perturbs proteostasis and tumorigenesis in triple-negative breast cancer

Kim, A., Gopalakrishnan, P., Suarez-Pizarro, M., Chen, C. C., Wang, X., McCoy, S. M., Umesh, N., Mordant, A. L., Barker, N. K., Herring, L. E., et al. (2026) · npj Breast Cancer · doi:10.1038/s41523-026-00974-5 · Cited by 1 · see citing works

Harnessing Distinct Tissue-Resident Immune Niches via S100A9/TLR4 Improves Ketone, Lipid, and Glucose Metabolism

Lucibello, G., Ursino, G., Teixeira, P. D. S., Zahorán, S., Fanuele, F., Kallikourdis, M., Visentin, F., Veyrat‐Durebex, C., Widmer, A., Wu, Y., et al. (2025) · Endocrinology · doi:10.1210/endocr/bqaf131 · Cited by 1 · see citing works

YBX1 promotes angiogenesis after myocardial infarction by stabilizing HIF1α mRNA via m6A signaling

Bi, F., Yu, T., Liu, H., Cao, M., He, Y., Li, J., Wang, H., Kong, C., Xiao, H., Tian, H., et al. (2026) · iScience · doi:10.1016/j.isci.2026.114810 · Cited by 1 · see citing works

Phosphorylation of the AP2 μ2 subunit by p70S6 kinase facilitates clathrin-mediated endocytosis

Tempes, A., Brzozowska, A., Węgierski, T., Fasemire, A., Olek, K., Jastrzębski, K., Liszewska, E., Misztal, K., Machnicka, K., Macias, M., et al. (2026) · Journal of Cell Science · doi:10.1242/jcs.264867 · Cited by 1 · see citing works

Mesenchymal Stem Cell-Derived Exosomes for Myocardial Infarction Treatment

Zheng, H., Hong, Y., Hu, B., Li, X., & Zhang, Y. (2023) · Physiology · doi:10.5772/intechopen.110736 · Cited by 1 · see citing works

The nanoscale organization of reticulon 4 shapes local endoplasmic reticulum structure in situPreprint

Fuentes, L. A., Marin, Z., Tyson, J., Baddeley, D., & Bewersdorf, J. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.01.26.525608 · Cited by 1 · see citing works

EHMT2/G9a-Inhibition Reprograms Cancer-Associated Fibroblasts (CAFs) to a More Differentiated, Less Proliferative and Invasive StatePreprint

Wu, N. C., Quevedo, R., Nurse, M., Hezaveh, K., Liu, H., Sun, F., Muffat, J., Sun, Y., Simmons, C. A., McGaha, T. L., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.07.17.549300 · Cited by 1 · see citing works

TranSiGen: Deep representation learning of chemical-induced transcriptional profilePreprint

Tong, X., Qu, N., Kong, X., Ni, S., Wang, K., Zhang, L., Wen, Y., Zhang, S., Li, X., & Zheng, M. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.11.12.566777 · Cited by 1 · see citing works

Multi-omic and functional screening reveal targetable vulnerabilities in TP53 mutated multiple myelomaPreprint

Tsallos, D., Ikonen, N., Miettinen, J. J., Majumder, M. M., Eldfors, S., Västrik, I., Parsons, A., Suvela, M. H., Dunphy, K., Dowling, P., et al. (2024) · medRxiv · doi:10.1101/2024.08.23.24312359 · Cited by 1 · see citing works

Inferring tumour microenvironment ecosystems from scRNA-seq atlasesPreprint

Yu, C., Geuenich, M. J., Ge, S., Jang, G.-H., Ju, T. T., Zhang, A. X. W., O'Kane, G. M., Notta, F., & Campbell, K. R. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.08.21.608956 · Cited by 1 · see citing works

Targeting de novo lipogenesis improves gemcitabine efficacy in pancreatic ductal adenocarcinomaPreprint

Hancock, S. E., Garthwaite, L. L., Harellis, K., Susetio, M., Ding, E., Choong, L. L. Y., Contreras, O., Nguyen, A., Lising, J., Hansen, F., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.12.18.628624 · Cited by 1 · see citing works

Myonuclear domain-associated and central nucleation-dependent spatial restriction of dystrophin protein expression in a novel DMD mouse modelPreprint

Chwalenia, K., Feng, V.-Y., Hemmer, N., Hildyard, J. C. W., Roskrow, L. E., Piercy, R. J., Wang, E. T., Aartsma-Rus, A. M., van Putten, M., Wood, M. J. A., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.07.24.666562 · Cited by 1 · see citing works

Astrocytic Ceruloplasmin Deficiency Triggers Iron Toxicity and Neurodegeneration in a LRRK2 Parkinson's Tri-Culture ModelPreprint

Testa, V., Montero-Muñoz, J., Baruffi, V., Alzeer, M., Mularoni, L., Fernández‐Carasa, I., Simmini, G., Comellas-Comaposada, N., Ake, F. A., Richaud, Y., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.08.01.668099 · Cited by 1 · see citing works

The SNCA A53T mutation sensitizes human neurons and microglia to ferroptosisPreprint

Mahoney‐Sanchez, L., Clarke, H., Penverne, A., Evans, J. R., D’Sa, K., Strohbuecker, S., Lopez-Garcia, P., Cosker, K., Šoltić, D., O’Callaghan, B., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.10.13.682089 · Cited by 1 · see citing works

Chromatin association promotes UBR5-mediated degradation of RbPreprint

Zhang, S., Lanz, M. C., Konschnik, J., & Skotheim, J. M. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.04.16.719064 · Cited by 1 · see citing works

A dynamic Boolean model of molecular and cellular interactions represents psoriasis development and predicts drug candidatesPreprint

Tsirvouli, E., Noël, V., Flobak, Å., Calzone, L., & Kuiper, M. T. R. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.09.03.556147

RIPC may promotes angiogenesis of myocardium by downregulation of miR-148aPreprint

Li, M., Zhao, Z., Nie, M., Guo, Q., & Zhang, Z. (2023) · Research Square · doi:10.21203/rs.3.rs-3763747/v1

ARHGEF3 Regulates Hair Follicle MorphogenesisPreprint

Kalyanakrishnan, K., Beaudin, A., Jetté, A., Ghezelbash, S., Hotea, D. I., Chen, J., Lefrançois, P., & Laurin, M. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.09.13.612256

Identification and interaction analysis of molecular markers in myocardial infarction by bioinformatics and next-generation sequencing data analysis

Vastrad, B. M., & Vastrad, C. M. (2024) · Egyptian Journal of Medical Human Genetics · doi:10.1186/s43042-024-00584-5

HER2-driven mammary tumorigenesis enhances bioenergetics despite reductions in mitochondrial contentPreprint

Frangos, S. M., Brunetta, H. S., Wang, D., Jabile, M. J. T., Jeffries, L., Mencfeld, G., David, W. L., Muller, W. J., Khursigara, C. M., Fisher‐Wellman, K. H., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.11.03.621754

The kinesin KIF3AC recycles endocytosed integrin to polarize adhesion formation towards the leading edgePreprint

Zenzen, J. A. R., Nader, G. P. F., Antoku, S., & Gundersen, G. G. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.12.09.627580

Intestinal stem cell renewal controlled by capillary morphogenesis gene 2 following injuryPreprint

Bracq, L. J., Chuat, A., Kunz, B., Burri, O., Guiet, R., & van der Goot, F. G. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.01.07.631493

Unveiling theranostic potential: Insights into cell-free microRNA-protein interactions

Sahu, V. K., Sur, S., Agarwal, S., Madhyastha, H., Ranjan, A., & Basu, S. (2025) · Biophysical Chemistry · doi:10.1016/j.bpc.2025.107421 · Cited by 1 · see citing works

Immune Cells Infiltration of Patient Derived Glioblastoma Cells spheroids in Acoustic Levitation in Bulk Acoustic Wave devicesPreprint

Mousset, X., Kuermanbayi, S., Chloé, D., Jeger‐Madiot, N., Delaunay, V., Ibdaih, A., El-Habr, E. A., Chneiweiss, H., Junier, M., Aider, J., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.02.28.640539

Genetic estimates and genome-wide association studies of antibody response in Tanzanian dairy cattle

Hernandez-Castro, L. E., Cook, E. A. J., Matika, O., Mengele, I. J., Motto, S. K., Bwatota, S. F., Zirra-Shallangwa, B., Pong‐Wong, R., Prendergast, J. G. D., Mrode, R., et al. (2025) · Frontiers in Genetics · doi:10.3389/fgene.2025.1497355

Developmental Plasticity and Stromal Co-option Shape a Pituitary Neuroendocrine Tumor Transcriptional ContinuumPreprint

Osorio, R. C., Oh, J. Y., Sati, A., Jung, J., Ehrenberg, A. J., Saha, A., Lad, M., Khela, H., Brennick, N., Giannikopoulos, P., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.06.18.659743

Lcn2 deficiency leads to social impairments independent of maternal immune activationPreprint

Pękała, M., Zawiślak, S., Romanis, S., Nader, K., Cabaj, A., Madecka, A., Puścian, A., Knapska, E., Pawlak, R., Kaczmarek, L., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.06.27.661499

Autophagy maintains HEV identity and function during inflammationPreprint

Jacobs, K., Hua, Y., Nikolakopoulos, A. P., Gupta, S., Vella, G., Laranjeiro, A. F. D., Bonnereau, J., Guyot, M., Mourão, L., Cansiz, F., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.08.06.668862

Transcription factor ETV1 promotes angiogenesis after myocardial infarction via activation of the VEGFA/VEGFR2/eNOS pathway

Wang, J., Li, C., Li, F., Fang, S., & Chen, Y. (2025) · Frontiers in Cardiovascular Medicine · doi:10.3389/fcvm.2025.1633438

Bioinformatic inference of the exercise-responsive control of p70 S6 kinase through RPS6KB1 expressionPreprint

McColl, T. J., Zhang, R., Dugourd, A. J. F., Sáez-Rodríguez, J., & Clarke, D. C. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.10.11.681841

Skin-derived G-CSF activates pathological granulopoiesis upon psoriasis

Kosasih, T., Morishima, T., Lee, S., Yoon, J., Wakahashi, K., Kim, P., Sada, A., & Takizawa, H. (2026) · EMBO Molecular Medicine · doi:10.1038/s44321-026-00456-y

The assembly of stress granule-like foci during foot-and-mouth disease virus infection is uncoupled from activation of cellular intrinsic antiviral signallingPreprint

Marques, M., Sun, Z., Yasmin, A., Taylor, J. P., Ruggieri, A., Tuthill, T. J., & Locker, N. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.10.30.685519

Pan-cancer multi-omics analysis identifies non-canonical oncogenic functions beyond DNA replication of the POLE2 subunit of DNA Polymerase epsilonPreprint

Krasilia, A., Chaudhry, D., Fijałkowska, I. J., & Dmowski, M. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2025.12.09.693296

Nogo-A-cleaved amino-terminal fragment but not Nogo-B regulates STAT3 activation

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