Correction of dysregulated lipid metabolism normalizes gene expression in oligodendrocytes and prolongs lifespan in female poly-GA C9orf72 mice
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Clinical and genetic research links altered cholesterol metabolism with ALS development and progression, yet pinpointing specific pathomechanisms remain challenging. We investigated how cholesterol dysmetabolism interacts with protein aggregation, demyelination, and neuronal loss in ALS. Bulk RNAseq transcriptomics showed decreased cholesterol biosynthesis and increased cholesterol export in ALS mouse models (GA-Nes, GA-Camk2a GA-CFP, rNLS8) and patient samples (spinal cord), suggesting an adaptive response to cholesterol overload. Consequently, we assessed the efficacy of the cholesterol-binding drug 2-hydroxypropyl-β-cyclodextrin (CD) in a fast-progressing C9orf72 ALS mouse model with extensive poly-GA expression and myelination deficits. CD treatment normalized cholesteryl ester levels, lowered neurofilament light chain levels, and prolonged lifespan in female but not male GA-Nes mice, without impacting poly-GA aggregates. Single nucleus transcriptomics indicated that CD primarily affected oligodendrocytes, significantly restored myelin gene expression, increased density of myelinated axons, inhibited the disease-associated oligodendrocyte response, and downregulated the lipid-associated genes Plin4 and ApoD. These results suggest that reducing excess free cholesterol in the CNS could be a viable ALS treatment strategy.
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PLIN4 has been reported to be increased in disease-associated oligodendrocytes in a mouse model of amyotrophic lateral sclerosis.
“PLIN4 has also been reported to be increased in disease-associated oligodendrocytes in a mouse model of amyotrophic lateral sclerosis [33].”
From Astrocytic APOE3-Christchurch expression ameliorates brain amyloid-β pathology in 5xFAD mice (2026) · cites this paper as [33]
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Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris
The Tabula Muris Consortium, coordination, O., coordination, L., processing, O. C. A., sequencing, L. P. A., analysis, C. D., annotation, C. T., Writing group, Supplemental text writing group, & Principal investigators (2018) · Nature · doi:10.1038/s41586-018-0590-4 · Cited by 3,326 · see citing works
Spatial Transcriptomics and In Situ Sequencing to Study Alzheimer’s Disease
Chen, W.-T., Lu, A., Craessaerts, K., Pavie, B., Sala Frigerio, C., Corthout, N., Qian, X., Laláková, J., Kühnemund, M., Voytyuk, I., et al. (2020) · Cell · doi:10.1016/j.cell.2020.06.038 · Cited by 949 · see citing works
Disease-specific oligodendrocyte lineage cells arise in multiple sclerosis
Falcão, A. M., van Bruggen, D., Marques, S., Meijer, M., Jäkel, S., Agirre, E., Samudyata, Floriddia, E. M., Vanichkina, D. P., ffrench-Constant, C., et al. (2018) · Nature Medicine · doi:10.1038/s41591-018-0236-y · Cited by 579 · see citing works
APOE4 impairs myelination via cholesterol dysregulation in oligodendrocytes
Blanchard, J. W., Akay, L. A., Davila-Velderrain, J., von Maydell, D., Mathys, H., Davidson, S. M., Effenberger, A., Chen, C.-Y., Maner-Smith, K., Hajjar, I., et al. (2022) · Nature · doi:10.1038/s41586-022-05439-w · Cited by 493 · cited 1× · see citing works
“These results suggest a new therapeutic strategy, although validation in other mouse models of C9orf72-ALS/FTD, such as BAC transgenic mice that show disease phenotypes, will be needed in the future.”
Myelin dysfunction drives amyloid-β deposition in models of Alzheimer’s disease
Depp, C., Sun, T., Sasmita, A. O., Spieth, L., Berghoff, S. A., Nazarenko, T., Overhoff, K., Steixner-Kumar, A. A., Subramanian, S., Arinrad, S., et al. (2023) · Nature · doi:10.1038/s41586-023-06120-6 · Cited by 476 · see citing works
Self-citationDipeptide repeat protein pathology in C9ORF72 mutation cases: clinico-pathological correlations
Mackenzie, I. R., Arzberger, T., Kremmer, E., Troost, D., Lorenzl, S., Mori, K., Weng, S.-M., Haass, C., Kretzschmar, H. A., Edbauer, D., et al. (2013) · Acta Neuropathologica · doi:10.1007/s00401-013-1181-y · Cited by 345 · see citing works
Self-citationSingle-Nucleus RNA-Seq Is Not Suitable for Detection of Microglial Activation Genes in Humans
Thrupp, N., Sala Frigerio, C., Wolfs, L., Skene, N. G., Fattorelli, N., Poovathingal, S., Fourne, Y., Matthews, P. M., Theys, T., Mancuso, R., et al. (2020) · Cell Reports · doi:10.1016/j.celrep.2020.108189 · Cited by 329 · cited 1× · see citing works
“For eg. at P21 when drug is administered, is myelin comparable in the genotypes as this would speak towards a rescue of demyelination by CD. 9) The final section of the manuscript examines the expression of the cholesterol specific gene Plin4.”
Disease-associated oligodendrocyte responses across neurodegenerative diseases
Pandey, S., Shen, K., Lee, S.-H., Shen, Y.-A. A., Wang, Y., Otero-García, M., Kotova, N., Vito, S. T., Laufer, B. I., Newton, D. F., et al. (2022) · Cell Reports · doi:10.1016/j.celrep.2022.111189 · Cited by 227 · cited 1× · see citing works
“Below is a brief summary of the key changes made in response to your suggestions: Extended Figure 1a: We replicated the cholesterol dysmetabolism in additional RNAseq datasets from independent cohorts of GA-CFP and rNLS8 mice, both models with neuron-specific aggregate expression.”
Lorente Pons, A., Higginbottom, A., Cooper‐Knock, J., Alrafiah, A., Alofi, E., Kirby, J., Shaw, P. J., Wood, J. D., & Highley, J. R. (2020) · The Journal of Pathology · doi:10.1002/path.5455 · Cited by 57 · see citing works
Flagged first, then by citations
Research works printed but not linked: 85
- [1]Hardiman, O. et al. Amyotrophic lateral sclerosis. Nat. Rev. Dis. Prim. 3, 17071 (2017). 28980624 · DOI
- [2]Feldman E. L. et al. Amyotrophic Lateral Sclerosis (Lancet, 2022). PMC10089700 36116464
- [4]Neumann, M. et al. TDP-43-positive white matter pathology in frontotemporal lobar degeneration with ubiquitin-positive inclusions. J. Neuropathol. Exp. Neurol. 66, 177–183 (2007). 17356379 · DOI
- [5]Murray, M. E. et al. Clinical and neuropathologic heterogeneity of c9FTD/ALS associated with hexanucleotide repeat expansion in C9ORF72. Acta Neuropathol. 122, 673–690 (2011). 22083254 PMC3277860 · DOI
- [6]Mori, K. et al. Bidirectional transcripts of the expanded C9orf72 hexanucleotide repeat are translated into aggregating dipeptide repeat proteins. Acta Neuropathol. 126, 881–893 (2013). 24132570 · DOI
- [7]Mori, K. et al. The C9orf72 GGGGCC repeat is translated into aggregating dipeptide-repeat proteins in FTLD/ALS. Science 339, 1335–1338 (2013). 23393093 · DOI
- [8]Ash, P. E. et al. Unconventional translation of C9ORF72 GGGGCC expansion generates insoluble polypeptides specific to c9FTD/ALS. Neuron 77, 639–646 (2013). 23415312 PMC3593233 · DOI
- [9]Gendron, T. F. et al. Antisense transcripts of the expanded C9ORF72 hexanucleotide repeat form nuclear RNA foci and undergo repeat-associated non-ATG translation in c9FTD/ALS. Acta Neuropathol. 126, 829–844 (2013). 24129584 PMC3830741 · DOI
- [10]Zu, T. et al. RAN proteins and RNA foci from antisense transcripts in C9ORF72 ALS and frontotemporal dementia. Proc. Natl. Acad. Sci. USA 110, E4968–E4977 (2013). 24248382 PMC3870665 · DOI
- [11]Khosravi, B. et al. Cell-to-cell transmission of C9orf72 poly-(Gly-Ala) triggers key features of ALS/FTD. EMBO J. 39, e102811 (2020). 32175624 PMC7156967 · DOI
- [12]Northall, A. et al. Multimodal layer modelling reveals in vivo pathology in amyotrophic lateral sclerosis. Brain 147, 1087–1099 (2024). 37815224 PMC10907094 · DOI
- [13]Kang, S. H. et al. Degeneration and impaired regeneration of gray matter oligodendrocytes in amyotrophic lateral sclerosis. Nat. Neurosci. 16, 571–579 (2013). 23542689 PMC3637847 · DOI · Paper page
- [14]Kenigsbuch, M. et al. A shared disease-associated oligodendrocyte signature among multiple CNS pathologies. Nat. Neurosci. 25, 876–886 (2022). 35760863 PMC9724210 · DOI · Paper page
- [17]Horiuchi, M. et al. ALS-linked mutant TDP-43 in oligodendrocytes induces oligodendrocyte damage and exacerbates motor dysfunction in mice. Acta Neuropathol. Commun. 12, 184 (2024). 39605053 PMC11603663 · DOI
- [20]Zhou, Y. et al. Human and mouse single-nucleus transcriptomics reveal TREM2-dependent and TREM2-independent cellular responses in Alzheimer’s disease. Nat. Med. 26, 131–142 (2020). 31932797 PMC6980793 · DOI · Paper page
- [21]Kaya, T. et al. CD8(+) T cells induce interferon-responsive oligodendrocytes and microglia in white matter aging. Nat. Neurosci. 25, 1446–1457 (2022). 36280798 PMC9630119 · DOI · Paper page
- [22]Stadelmann, C., Timmler, S., Barrantes-Freer, A. & Simons, M. Myelin in the central nervous system: structure, function, and pathology. Physiol. Rev. 99, 1381–1431 (2019). 31066630 · DOI
- [23]Cantuti-Castelvetri, L. et al. Defective cholesterol clearance limits remyelination in the aged central nervous system. Science 359, 684–688 (2018). 29301957 · DOI · Paper page
- [24]Zimmer, S. et al. Cyclodextrin promotes atherosclerosis regression via macrophage reprogramming. Sci. Transl. Med. 8, 333ra350 (2016). PMC4878149 27053774 · DOI
- [25]Tanaka, Y. et al. Efficacy of 2-hydroxypropyl-beta-cyclodextrin in Niemann-Pick disease Type C model mice and its pharmacokinetic analysis in a patient with the disease. Biol. Pharm. Bull. 38, 844–851 (2015). 26027824 · DOI
- [26]Hartmann, H., Ho, W. Y., Chang, J. C. & Ling, S. C. Cholesterol dyshomeostasis in amyotrophic lateral sclerosis: cause, consequence, or epiphenomenon? FEBS J. 289, 7688–7709 (2022). 34469619 · DOI
- [27]Mariosa, D. et al. Blood biomarkers of carbohydrate, lipid, and apolipoprotein metabolisms and risk of amyotrophic lateral sclerosis: a more than 20-year follow-up of the Swedish AMORIS cohort. Ann. Neurol. 81, 718–728 (2017). 28437840 · DOI
- [28]Thompson, A. G., Talbot, K. & Turner, M. R. Higher blood high density lipoprotein and apolipoprotein A1 levels are associated with reduced risk of developing amyotrophic lateral sclerosis. J. Neurol. Neurosurg. Psychiatry 93, 75–81 (2022). 34518331 PMC8685635 · DOI
- [29]Dupuis, L. et al. Dyslipidemia is a protective factor in amyotrophic lateral sclerosis. Neurology 70, 1004–1009 (2008). 18199832 · DOI
- [30]Peter, R. S. et al. Life course body mass index and risk and prognosis of amyotrophic lateral sclerosis: results from the ALS registry Swabia. Eur. J. Epidemiol. 32, 901–908 (2017). 28975435 · DOI · Paper page
- [31]Dupuis, L., Pradat, P. F., Ludolph, A. C. & Loeffler, J. P. Energy metabolism in amyotrophic lateral sclerosis. Lancet Neurol. 10, 75–82 (2011). 21035400 · DOI
- [32]Diekstra, F. P. et al. Mapping of gene expression reveals CYP27A1 as a susceptibility gene for sporadic ALS. PLoS ONE 7, e35333 (2012). 22509407 PMC3324559 · DOI
- [33]van Rheenen, W. et al. Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology. Nat. Genet 53, 1636–1648 (2021). 34873335 PMC8648564 · DOI · Paper page
- [34]LaClair, K. D. et al. Congenic expression of poly-GA but not poly-PR in mice triggers selective neuron loss and interferon responses found in C9orf72 ALS. Acta Neuropathol. 140, 121–142 (2020). 32562018 PMC7360660 · DOI
- [35]Schludi, M. H. et al. Spinal poly-GA inclusions in a C9orf72 mouse model trigger motor deficits and inflammation without neuron loss. Acta Neuropathol. 134, 241–254 (2017). 28409281 PMC5508040 · DOI
- [36]Walker, A. K. et al. Functional recovery in new mouse models of ALS/FTLD after clearance of pathological cytoplasmic TDP-43. Acta Neuropathol. 130, 643–660 (2015). 26197969 PMC5127391 · DOI
- [37]Zhou, Q. et al. Active poly-GA vaccination prevents microglia activation and motor deficits in a C9orf72 mouse model. EMBO Mol. Med. 12, e10919 (2020). 31858749 PMC7005532 · DOI
- [38]Esperante, I. J. et al. Testosterone reduces myelin abnormalities in the wobbler mouse model of amyotrophic lateral sclerosis. Biomolecules14, 428 (2024). PMC11048492 38672445
- [39]Holzmann, C., Witt, M., Rolfs, A., Antipova, V. & Wree, A. Gender-specific effects of two treatment strategies in a mouse model of Niemann-Pick disease type C1. Int. J. Mol. Sci.22, 2539 (2021). PMC7962008 33802605
- [41]Keren-Shaul, H. et al. A unique microglia type associated with restricting development of Alzheimer’s disease. Cell 169, 1276–1290.e1217 (2017). 28602351 · DOI · Paper page
- [42]May, S. et al. C9orf72 FTLD/ALS-associated Gly-Ala dipeptide repeat proteins cause neuronal toxicity and Unc119 sequestration. Acta Neuropathol. 128, 485–503 (2014). 25120191 PMC4159571 · DOI
- [43]Minichiello, L. et al. Essential role for TrkB receptors in hippocampus-mediated learning. Neuron 24, 401–414 (1999). 10571233 · DOI · Paper page
- [44]Sodero, A. O. 24S-hydroxycholesterol: cellular effects and variations in brain diseases. J. Neurochem. 157, 899–918 (2021). 33118626 · DOI
- [45]Cutler, R. G., Pedersen, W. A., Camandola, S., Rothstein, J. D. & Mattson, M. P. Evidence that accumulation of ceramides and cholesterol esters mediates oxidative stress-induced death of motor neurons in amyotrophic lateral sclerosis. Ann. Neurol. 52, 448–457 (2002). 12325074 · DOI
- [46]Dodge, J. C. et al. Neutral lipid cacostasis contributes to disease pathogenesis in amyotrophic lateral sclerosis. J. Neurosci. 40, 9137–9147 (2020). 33051352 PMC7673008 · DOI
- [47]Chaves-Filho, A. B. et al. Alterations in lipid metabolism of spinal cord linked to amyotrophic lateral sclerosis. Sci. Rep. 9, 11642 (2019). 31406145 PMC6691112 · DOI
- [48]Zambusi, A. et al. TDP-43 condensates and lipid droplets regulate the reactivity of microglia and regeneration after traumatic brain injury. Nat. Neurosci. 25, 1608–1625 (2022). 36424432 · DOI
- [50]Spiller, K. J. et al. Microglia-mediated recovery from ALS-relevant motor neuron degeneration in a mouse model of TDP-43 proteinopathy. Nat. Neurosci. 21, 329–340 (2018). PMC5857237 29463850
- [51]Riemenschneider, H. et al. Targeting the glycine-rich domain of TDP-43 with antibodies prevents its aggregation in vitro and reduces neurofilament levels in vivo. Acta Neuropathol. Commun. 11, 112 (2023). 37434215 PMC10334564 · DOI
- [52]Nury, T. et al. Induction of oxiapoptophagy on 158N murine oligodendrocytes treated by 7-ketocholesterol-, 7beta-hydroxycholesterol-, or 24(S)-hydroxycholesterol: protective effects of alpha-tocopherol and docosahexaenoic acid (DHA; C22:6 n-3). Steroids 99, 194–203 (2015). 25683890 · DOI
- [53]Dodge, J. C., Yu, J., Sardi, S. P. & Shihabuddin, L. S. Sterol auto-oxidation adversely affects human motor neuron viability and is a neuropathological feature of amyotrophic lateral sclerosis. Sci. Rep. 11, 803 (2021). 33436868 PMC7804278 · DOI
- [54]Hsieh, K. et al. Perilipin family members preferentially sequester to either triacylglycerol-specific or cholesteryl-ester-specific intracellular lipid storage droplets. J. Cell Sci. 125, 4067–4076 (2012). 22685330 PMC3482316
- [55]Ruggieri, A. et al. Multiomic elucidation of a coding 99-mer repeat-expansion skeletal muscle disease. Acta Neuropathol. 140, 231–235 (2020). 32451610 PMC7360652 · DOI
- [56]Sztalryd, C. & Brasaemle, D. L. The perilipin family of lipid droplet proteins: gatekeepers of intracellular lipolysis. Biochim. Biophys. Acta Mol. Cell Biol. Lipids 1862, 1221–1232 (2017). 28754637 PMC5595658 · DOI
- [57]Han, X. et al. Plin4-dependent lipid droplets hamper neuronal mitophagy in the MPTP/p-Induced mouse model of Parkinson’s disease. Front. Neurosci. 12, 397 (2018). 29967574 PMC6015897 · DOI · Paper page
- [58]Zhu, L. et al. Perilipin 4 protein: an impending target for amyotrophic lateral sclerosis. Mol. Neurobiol. 58, 1723–1737 (2021). 33242187 · DOI
- [59]Wang, H. V. et al. Single-nucleus multiome analysis of the prefrontal cortex from C9orf72 ALS/FTD patients illuminates pathways affected during disease progression. bioRxiv, (2023).
- [60]Limone, F. et al. Single-nucleus sequencing reveals enriched expression of genetic risk factors in extratelencephalic neurons sensitive to degeneration in ALS. Nat. Aging4, 984–997 (2024). PMC11257952 38907103
- [62]Sirisi, S. et al. Myelin loss in C9orf72 hexanucleotide expansion carriers. J. Neurosci. Res. 100, 1862–1875 (2022). 35766328
- [63]Guzman, K. M. et al. Conditional depletion of Fus in oligodendrocytes leads to motor hyperactivity and increased myelin deposition associated with Akt and cholesterol activation. Glia 68, 2040–2056 (2020). 32187401 PMC7772959 · DOI
- [64]Heo, D. et al. Stage-specific control of oligodendrocyte survival and morphogenesis by TDP-43. Elife11, e75230 (2022). PMC8970587 35311646
- [65]Ferraiuolo, L. et al. Oligodendrocytes contribute to motor neuron death in ALS via SOD1-dependent mechanism. Proc. Natl. Acad. Sci. USA 113, E6496–E6505 (2016). 27688759 PMC5081600 · DOI
- [67]Schludi, M. H. et al. Distribution of dipeptide repeat proteins in cellular models and C9orf72 mutation cases suggests link to transcriptional silencing. Acta Neuropathol. 130, 537–555 (2015). 26085200 PMC4575390 · DOI
- [68]Cruz, A. L. S., Barreto, E. A., Fazolini, N. P. B., Viola, J. P. B. & Bozza, P. T. Lipid droplets: platforms with multiple functions in cancer hallmarks. Cell Death Dis. 11, 105 (2020). 32029741 PMC7005265 · DOI
- [69]Rassart, E., Desmarais, F., Najyb, O., Bergeron, K. F. & Mounier, C. Apolipoprotein D. Gene 756, 144874 (2020). 32554047 PMC8011330 · DOI
- [70]Abi-Mosleh, L., Infante, R. E., Radhakrishnan, A., Goldstein, J. L. & Brown, M. S. Cyclodextrin overcomes deficient lysosome-to-endoplasmic reticulum transport of cholesterol in Niemann-Pick type C cells. Proc. Natl. Acad. Sci. USA 106, 19316–19321 (2009). 19884502 PMC2780767 · DOI
- [71]Liu, B. et al. Reversal of defective lysosomal transport in NPC disease ameliorates liver dysfunction and neurodegeneration in the npc1-/- mouse. Proc. Natl. Acad. Sci. USA 106, 2377–2382 (2009). 19171898 PMC2650164 · DOI
- [72]Yao, J. et al. Neuroprotection by cyclodextrin in cell and mouse models of Alzheimer disease. J. Exp. Med. 209, 2501–2513 (2012). 23209315 PMC3526350 · DOI
- [73]Becktel, D. A. et al. Repeated administration of 2-hydroxypropyl-beta-cyclodextrin (HPbetaCD) attenuates the chronic inflammatory response to experimental stroke. J. Neurosci. 42, 325–348 (2022). 34819339 PMC8802936 · DOI
- [74]Agrawal, N. et al. Neurofilament light chain in cerebrospinal fluid as a novel biomarker in evaluating both clinical severity and therapeutic response in Niemann-Pick disease type C1. Genet. Med. 25, 100349 (2023). 36470574 PMC9992339 · DOI
- [75]Sharma, R. et al. Long-term administration of intravenous trappsol(R) Cyclo (HP-beta-CD) results in clinical benefits and stabilization or slowing of disease progression in patients with Niemann-Pick disease type C1: results of an international 48-week phase I/II trial. Mol. Genet Metab. Rep. 36, 100988 (2023). 37670901 PMC10475848
- [76]Kunkel, T. J. et al. The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells. Nat. Commun. 14, 3964 (2023). 37407594 PMC10322873 · DOI
- [77]Greensmith, L. & Bryson, J. B. The cholesterol depleting agent, (2-Hydroxypropyl)-ss-cyclodextrin, does not affect disease progression in SOD1(G93A) mice. Amyotroph. Lateral Scler. Frontotemporal. Degener.25, 1–7 (2023). 37489926
- [78]Proniuk, S. & Blanchard, J. Influence of degree of substitution of cyclodextrins on their colligative properties in solution. J. Pharm. Sci. 90, 1086–1090 (2001). 11536213 · DOI
- [79]Kislinger, G. et al. ATUM-FIB microscopy for targeting and multiscale imaging of rare events in mouse cortex. STAR Protoc. 1, 100232 (2020). 33377119 PMC7757728 · DOI
- [80]Harris, C. R. et al. Array programming with NumPy. Nature 585, 357–362 (2020). 32939066 PMC7759461 · DOI · Paper page
- [81]Bradski. G. The OpenCV Library. Dr Dobb’s Journal of Software Tools (The OpenCV Library, 2000).
- [82]van der Walt, S. et al. scikit-image: image processing in Python. PeerJ 2, e453 (2014). 25024921 PMC4081273 · DOI
- [83]Stringer, C., Wang, T., Michaelos, M. & Pachitariu, M. Cellpose: a generalist algorithm for cellular segmentation. Nat. Methods 18, 100–106 (2021). 33318659 · DOI · Paper page
- [85]Hao, Y. et al. Integrated analysis of multimodal single-cell data. Cell 184, 3573–3587.e3529 (2021). 34062119 PMC8238499 · DOI · Paper page
- [86]Korsunsky, I. et al. Fast, sensitive and accurate integration of single-cell data with Harmony. Nat. Methods 16, 1289–1296 (2019). 31740819 PMC6884693 · DOI · Paper page
- [87]Zappia, L. & Oshlack, A. Clustering trees: a visualization for evaluating clusterings at multiple resolutions. GigaScience7, giy083 (2018). PMC6057528 30010766
- [88]Franzén, O., Gan, L.-M. & Björkegren, J. L. M. PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data. Database2019, baz046 (2019). PMC6450036 30951143
- [89]Cembrowski, M. S., Wang, L., Sugino, K., Shields, B. C. & Spruston, N. Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons. eLife5, e14997 (2016). PMC4846374 27113915
- [90]Amezquita, R. A. et al. Orchestrating single-cell analysis with Bioconductor. Nat. Methods 17, 137–145 (2020). 31792435 PMC7358058 · DOI · Paper page
- [91]Love, M. I., Huber, W. & Anders, S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 15, 550 (2014). 25516281 PMC4302049 · DOI · Paper page
- [92]Dhingra, A. et al. Automated production of human induced pluripotent stem cell-derived cortical and dopaminergic neurons with integrated live-cell monitoring. J. Vis. Exp.162, e61525 (2020). 32831313
- [93]Czuppa, M. et al. Drug screen in iPSC-Neurons identifies nucleoside analogs as inhibitors of (G4C2)n expression in C9orf72 ALS/FTD. Cell Rep. 39, 110913 (2022). 35675776 · DOI
- [94]Strauss, T. et al. iPS cell-based model for MAPT haplotype as a risk factor for human tauopathies identifies no major differences in TAU expression. Front. Cell Dev. Biol. 9, 726866 (2021). 34532319 PMC8438159 · DOI
- [95]Janjic, A. et al. Prime-seq, efficient and powerful bulk RNA sequencing. Genome Biol. 23, 88 (2022). 35361256 PMC8969310 · DOI
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Astrocytic APOE3-Christchurch expression ameliorates brain amyloid-β pathology in 5xFAD mice
Raulin, A.-C., Alnobani, A., Rodriguez-Martinez, P., Lee, E., Linares, C., Yslas, A. R., Li, M., Ren, Y., Doss, S. V., Roy, B., et al. (2026) · Translational Psychiatry · doi:10.1038/s41398-026-04002-9
- Authors
- Rezaei, A., Kocsis-Jutka, V., Gunes, Z. I., Zeng, Q., Kislinger, G., Bauernschmitt, F., Isilgan, H. B., Parisi, L. R., Kaya, T., Franzenburg, S., Koppenbrink, J., Knogler, J., Arzberger, T., Farny, D., Nuscher, B., Katona, E., Dhingra, A., Yang, C., Gouna, G., LaClair, K. D., Janjic, A., Enard, W., Zhou, Q., Hagan, N., Ofengeim, D., Beltrán, E., Gokce, O., Simons, M., Liebscher, S., & Edbauer, D.
- Affiliations
- German Center for Neurodegenerative Diseases (DE)
- Munich Cluster for Systems Neurology (DE)
- University Hospital Bonn (DE)
- Christian-Albrechts-Universität zu Kiel (DE)
- LMU Klinikum (DE)
- Ludwig-Maximilians-Universität München (DE)
- Innsbruck Medical University (AT)
- Corresponding author
- Edbauer, Dieter
- ORCID
- Rezaei, Ali
- Gunes, Zeynep I.
- Zeng, Qing
- Kislinger, Georg
- Isilgan, Huseyin Berkcan
- Parisi, Laura R.
- Kaya, Tuğberk
- Franzenburg, Sören
- Nuscher, Brigitte
- Dhingra, Ashutosh
- Yang, Chao
- Gouna, Garyfallia
- LaClair, Katherine D.
- Janjic, Aleksandar
- Enard, Wolfgang
- Zhou, Qihui
- Hagan, Nellwyn
- Ofengeim, Dimitry
- Beltrán, Eduardo
- Simons, Mikael
- Liebscher, Sabine
- Edbauer, Dieter
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- Nature Communications
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- 2025-04-11
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- Sanofi
- European Commission (101057649, 101117710)
- Deutsche Forschungsgemeinschaft (EXC 2145, 407495230, 390857198, 423957469)
- HORIZON EUROPE Framework Programme (101057649)
- Topics
- Health Sciences › Medicine › Neurology › Amyotrophic Lateral Sclerosis Research
- Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Genetic Neurodegenerative Diseases
- Keywords
- amyotrophic lateral sclerosis, C9orf72, cholesterol metabolism, oligodendrocytes, hydroxypropyl-β-cyclodextrin, myelination, lifespan extension, lipid metabolism, PLIN4, apolipoprotein D, neurofilament light chain, sex differences, single-nucleus transcriptomics, cholesterol export, myelin gene expression
- MeSH terms
- 2-Hydroxypropyl-beta-cyclodextrin, C9orf72 Protein, Amyotrophic Lateral Sclerosis, Animals, Cholesterol, Disease Models, Animal, Female, Humans, Longevity, Male, Mice, Transgenic, Myelin Sheath, Oligodendroglia, Spinal Cord, Lipid Metabolism, Mice
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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