Student or educator? Sign up with your school email and get 6 months of Pro free.
Cited by 640

The DOI matches its Crossref record; 33 of the 33 references it cites were found in a registry or an index.

Virtual histological staining of unlabelled tissue-autofluorescence images via deep learning

Open access
Rivenson, Yair, Wang, Hongda, Wei, Zhensong, de Haan, Kevin, Zhang, Yibo, Wu, Yichen, Günaydın, Harun, Zuckerman, Jonathan E., Chong, Thomas, Sisk, Anthony E., Westbrook, Lindsey M., Wallace, W. Dean, Ozcan, Aydogan·2019·Nature Biomedical Engineering

Abstract

The histological analysis of tissue samples, widely used for disease diagnosis, involves lengthy and laborious tissue preparation. Here, we show that a convolutional neural network trained using a generative adversarial-network model can transform wide-field autofluorescence images of unlabelled tissue sections into images that are equivalent to the bright-field images of histologically stained versions of the same samples. A blind comparison, by board-certified pathologists, of this virtual staining method and standard histological staining using microscopic images of human tissue sections of the salivary gland, thyroid, kidney, liver and lung, and involving different types of stain, showed no major discordances. The virtual-staining method bypasses the typically labour-intensive and costly histological staining procedures, and could be used as a blueprint for the virtual staining of tissue images acquired with other label-free imaging modalities. Deep learning can be used to virtually stain autofluorescence images of unlabelled tissue sections, generating images that are equivalent to the histologically stained versions.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/s41551-019-0362-y

Cites

33 of 33 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Show all 33 references

Cited by

See all 640

Metadata

Authors
Rivenson, Y., Wang, H., Wei, Z., de Haan, K., Zhang, Y., Wu, Y., Günaydın, H., Zuckerman, J. E., Chong, T., Sisk, A. E., Westbrook, L. M., Wallace, W. D., & Ozcan, A.
Venue
Nature Biomedical Engineering
Published
2019-03-04
Volume
3
Issue
6
Pages
466-477
ISSN
2157-846X (ISSN-L)
OpenAlex
W3098491829
Cited by
640
References
33
FWCI
29.93
Type
journal article
Language
en
Open access
green

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How to cite

Cite CoChat for the checks on this page, and the paper for its own findings.

This page
CoChat. (2026). Citation check: Virtual histological staining of unlabelled tissue-autofluorescence images via deep learning. https://app.cochat.ai/papers/10.1038/s41551-019-0362-y
The paper
Rivenson, Y., Wang, H., Wei, Z., de Haan, K., Zhang, Y., Wu, Y., Günaydın, H., Zuckerman, J. E., Chong, T., Sisk, A. E., Westbrook, L. M., Wallace, W. D., & Ozcan, A. (2019). Virtual histological staining of unlabelled tissue-autofluorescence images via deep learning. Nature Biomedical Engineering. https://doi.org/10.1038/s41551-019-0362-y

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.