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“The authors demonstrated an example of a metabolite differentially expressed within two cohorts of mice and utilized MASST to reveal that this metabolite is also differentially expressed in healthy and non-alcoholic fatty liver disease in humans – even without knowing the molecule's chemical structure.”
From Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products (2024) · cites this paper as [155]
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“The MASST tool finds all occurrences of a query MS/MS spectrum across all public metabolomics experiments.”
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“The enzymes responsible for these conjugation reactions are unknown.”
From Bile Acids Are Substrates for Amine N-Acyl Transferase Activity by Bile Salt Hydrolase (2022) · cites this paper as [17]
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“Recent studies demonstrated that bacteria, in addition to the host, have bile acid amine N-acyltransferase activity, with dozens of bacterially conjugated amino acid amidates identified1–4,6,17.”
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“All MCBAs were purified according to literature precedent and characterization data are consistent with reported data31,33,42,77,78.”
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Metadata
- Authors
- Wang, M., Jarmusch, A. K., Vargas, F., Aksenov, A. A., Gauglitz, J. M., Weldon, K., Petras, D., da Silva, R., Quinn, R., Melnik, A. V., van der Hooft, J. J. J., Caraballo-Rodríguez, A. M., Nothias, L. F., Aceves, C. M., Panitchpakdi, M., Brown, E., Di Ottavio, F., Sikora, N., Elijah, E. O., Labarta-Bajo, L., Gentry, E. C., Shalapour, S., Kyle, K. E., Puckett, S. P., Watrous, J. D., Carpenter, C. S., Bouslimani, A., Ernst, M., Swafford, A. D., Zúñiga, E. I., Balunas, M. J., Klassen, J. L., Loomba, R., Knight, R., Bandeira, N., & Dorrestein, P. C.
- Affiliations
- University of California San Diego (US)
- University of Connecticut (US)
- Corresponding author
- Dorrestein, Pieter C.
- ORCID
- Wang, Mingxun
- Jarmusch, Alan K.
- Vargas, Fernando
- Aksenov, Alexander A.
- Gauglitz, Julia M.
- Weldon, Kelly
- Petras, Daniel
- Quinn, Robert
- Melnik, Alexey V.
- van der Hooft, Justin J. J.
- Caraballo-Rodríguez, Andrés Mauricio
- Aceves, Christine M.
- Panitchpakdi, Morgan
- Brown, Elizabeth
- Sikora, Nicole
- Labarta-Bajo, Lara
- Gentry, Emily C.
- Shalapour, Shabnam
- Kyle, Kathleen E.
- Puckett, Sara P.
- Watrous, Jeramie D.
- Carpenter, Carolina S.
- Bouslimani, Amina
- Ernst, Madeleine
- Swafford, Austin D.
- Zúñiga, Elina I.
- Balunas, Marcy J.
- Klassen, Jonathan L.
- Loomba, Rohit
- Knight, Rob
- Bandeira, Nuno
- Dorrestein, Pieter C.
- Venue
- Nature Biotechnology
- Published
- 2020-01
- Volume
- 38
- Issue
- 1
- Pages
- 23-26
- ISSN
- 0733-222X (ISSN-L)
- 1087-0156
- 1546-1696
- PMC
- PMC7236533
- OpenAlex
- W2997345427
- Cited by
- 281
- References
- 26
- Citations by year
- 2026: 40 · 2025: 45 · 2024: 57 · 2023: 43 · 2022: 27 · 2021: 39 · 2020: 29
- FWCI
- 11.19
- Type
- journal article
- Language
- en
- Open access
- green
- research.wur.nl
- Licence
- public-domain
- www.springer.com/tdm (tdm)
- www.springer.com/tdm (vor)
- Locations
- Nature Biotechnology (publishedVersion)
- PubMed (publishedVersion)
- Socio-Environmental Systems Modeling (acceptedVersion, public-domain)
- PubMed Central (acceptedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- Funders
- Netherlands eScience Center ASDI eScience grant
- Gordon and Betty Moore Foundation (GBMF7622)
- Alfred P. Sloan Foundation (N/A)
- U.S. Department of Health & Human Services | National Institutes of Health (CA211211, P41 GM103484)
- United States Department of Defense | United States Navy | Office of Naval Research (N00014-15-1-2809)
- United States Department of Justice | National Institute of Justice (2015-DN-BX-K047)
- National Science Foundation (IOS-1656475)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolomics and Mass Spectrometry Studies
- Physical Sciences › Chemistry › Spectroscopy › Mass Spectrometry Techniques and Applications
- Physical Sciences › Chemistry › Spectroscopy › Advanced Proteomics Techniques and Applications
- Keywords
- spectral library search, metabolite annotation, unknown metabolites, cold pressor test, multi-omics, metabolic networks, medicinal plants, traditional East Asian medicine
- MeSH terms
- Algorithms, Mass Spectrometry, Reproducibility of Results, Knowledge Bases, Search Engine
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