The DOI matches its Crossref record; 48 of the 48 references it cites were found in a registry or an index.
Social deficits in Shank3-deficient mouse models of autism are rescued by histone deacetylase (HDAC) inhibition
Open accessAbstract
Haploinsufficiency of the SHANK3 gene is causally linked to autism spectrum disorder (ASD), and ASD-associated genes are also enriched for chromatin remodelers. Here we found that brief treatment with romidepsin, a highly potent class I histone deacetylase (HDAC) inhibitor, alleviated social deficits in Shank3-deficient mice, which persisted for ~3 weeks. HDAC2 transcription was upregulated in these mice, and knockdown of HDAC2 in prefrontal cortex also rescued their social deficits. Nuclear localization of β-catenin, a Shank3-binding protein that regulates cell adhesion and transcription, was increased in Shank3-deficient mice, which induced HDAC2 upregulation and social deficits. At the downstream molecular level, romidepsin treatment elevated the expression and histone acetylation of Grin2a and actin-regulatory genes and restored NMDA-receptor function and actin filaments in Shank3-deficient mice. Taken together, these findings highlight an epigenetic mechanism underlying social deficits linked to Shank3 deficiency, which may suggest potential therapeutic strategies for ASD patients bearing SHANK3 mutations.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The nucleocytoplasmic shuttle protein involved in both cell adhesion and transcriptional regulation, β-catenin, is found to link the loss of Shank3 in the synapse to the upregulation of HDAC2 and EHMT1/2 transcription in the nucleus 145,146 (Fig. 3).”
From Mechanisms of synaptic transmission dysregulation in the prefrontal cortex: pathophysiological implications (2022) · cites this paper as [145]
In the citing paper
“In PFC of Shank3-deficient mice, the loss of histone acetylation and upregulation of HDAC2 have been identified 145.”
From Mechanisms of synaptic transmission dysregulation in the prefrontal cortex: pathophysiological implications (2022) · cites this paper as [145]
In the citing paper
“Systemic administration of the class I HDAC inhibitor romidepsin or MS-275 leads to the robust and persistent alleviation of social deficits, as well as the restoration of actin regulators and NMDAR function in PFC 144,145.”
From Mechanisms of synaptic transmission dysregulation in the prefrontal cortex: pathophysiological implications (2022) · cites this paper as [145]
In the citing paper
“A recent series of studies have shown that targeting epigenetic enzymes to adjust gene expression and ameliorate synaptic defects in PFC is a potential strategy to normalize behavioral phenotypes associated with autism 144–147.”
From Mechanisms of synaptic transmission dysregulation in the prefrontal cortex: pathophysiological implications (2022) · cites this paper as [145]
In the citing paper
“consistent with the significant involvement of NMDARs in ASD [101–103].”
From 16p11.2 Copy Number Variations and Neurodevelopmental Disorders (2020) · cites this paper as [102]
In the citing paper
“This study suggests NMDAR hypofunction in PFC as a core mechanism in 16p11.2 deletion-linked phenotypes, consistent with the significant involvement of NMDARs in ASD [101–103].”
From 16p11.2 Copy Number Variations and Neurodevelopmental Disorders (2020) · cites this paper as [102]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Robinson, M. D., McCarthy, D. J., & Smyth, G. K. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btp616 · Cited by 41,364
Cutadapt removes adapter sequences from high-throughput sequencing reads
Martin, M. (2011) · EMBnet.journal · doi:10.14806/ej.17.1.200 · Cited by 33,889
HTSeq—a Python framework to work with high-throughput sequencing data
Anders, S., Pyl, P. T., & Huber, W. (2015) · Bioinformatics · doi:10.1093/bioinformatics/btu638 · Cited by 21,464
Kim, D., Pertea, G., Trapnell, C., Pimentel, H., Kelley, R., & Salzberg, S. L. (2013) · Genome Biology · doi:10.1186/gb-2013-14-4-r36 · Cited by 12,668
Meeting of minds: the medial frontal cortex and social cognition
Amodio, D. M., & Frith, C. D. (2006) · Nature Reviews Neuroscience · doi:10.1038/nrn1884 · Cited by 3,782
Synaptic, transcriptional and chromatin genes disrupted in autism
Study, T. D., De Rubeis, S., Autism, H. M. C. F., UK10K Consortium, The Autism Sequencing Consortium, He, X., Goldberg, A. P., Poultney, C. S., Samocha, K., Ercument Cicek, A., et al. (2014) · Nature · doi:10.1038/nature13772 · Cited by 2,746
HDAC2 negatively regulates memory formation and synaptic plasticity
Guan, J.-S., Haggarty, S. J., Giacometti, E., Dannenberg, J.-H., Joseph, N., Gao, J., Nieland, T. J. F., Zhou, Y., Wang, X., Mazitschek, R., et al. (2009) · Nature · doi:10.1038/nature07925 · Cited by 1,644
Durand, C. M., Betancur, C., Boeckers, T. M., Bockmann, J., Chaste, P., Fauchereau, F., Nygren, G., Rastam, M., Gillberg, I. C., Anckarsäter, H., et al. (2007) · Nature Genetics · doi:10.1038/ng1933 · Cited by 1,602
The many faces and functions of β‐catenin
Valenta, T., Hausmann, G., & Basler, K. (2012) · The EMBO Journal · doi:10.1038/emboj.2012.150 · Cited by 1,598
Shank3 mutant mice display autistic-like behaviours and striatal dysfunction
Peça, J., Feliciano, C., Ting, J. T., Wang, W., Wells, M. F., Venkatraman, T. N., Lascola, C. D., Fu, Z., & Feng, G. (2011) · Nature · doi:10.1038/nature09965 · Cited by 1,570
Cited by
Sorted by citations
Items 201–245 of 245
Roubertoux, P. L., & Fasano, L. (2018) · Time to knit · doi:10.1016/s0246-1072(18)83094-2 · Cited by 1
An epigenetic target for autism
Liston, C. M. (2018) · Science Translational Medicine · doi:10.1126/scitranslmed.aat4476
Energy metabolism and autism: the ameliorative potential of carnosine and agmatine
Hipkiss, A. R. (2018) · Neurological Disorders and Therapeutics · doi:10.15761/ndt.1000135
Watanabe, S., Kurotani, T., Oga, T., Noguchi, J., Isoda, R., Nakagami, A., Sakai, K., Nakagaki, K., Sumida, K., Hoshino, K., et al. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.08.18.255240
Genetic determinants of autism spectrum disorders - a review
Stanicki, P., Goliszek, K., Kasprzak, K., & Makarewicz, A. (2021) · Current Problems of Psychiatry · doi:10.2478/cpp-2021-0011
Sa'diyah, C. (2014) · SKRIPSI Jurusan Kependidikan Sekolah Dasar & Prasekolah - Fakultas Ilmu Pendidikan UM
KMT2E haploinsufficiency manifests autistic-like phenotypes and amygdala abnormality in micePreprint
Li, Y.-J., Li, C., Li, C., Hu, D., Xv, Z.-B., Zhang, S., Li, Q., Zhang, P., Lan, X., & Chen, X. (2022) · Research Square · doi:10.21203/rs.3.rs-1464871/v1
Sex-biased expression is associated with chromatin state in D. melanogaster and D. simulansPreprint
Nanni, A. V., Martinez, N., Graze, R. M., Morse, A. M., Newman, J. R. B., Jain, V., Vlaho, S., Signor, S. A., Nuzhdin, S. V., Renne, R., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.01.13.523946
Drug Repurposing Patent Applications January–March 2023
Mucke, H. A. (2023) · Assay and Drug Development Technologies · doi:10.1089/adt.2023.030
Gong, M., Li, J., Liu, Y., Wilke, M. V. M. B., Li, Q., Liu, H., Chen, L., Morales‐Rosado, J. A., Cohen, A. S. A., Hughes, S. S., et al. (2024) · medRxiv · doi:10.1101/2024.04.24.24304501
Aomine, Y., Shimo, Y., Sakurai, K., Abe, M., Macpherson, T., Ozawa, T., & Hikida, T. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.04.29.591794
Global developmental delay and intellectual disability
AlMutiri, R., AlHakeem, A., Shevell, M. I., & Srour, M. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-19041-4.00004-2
Protein Transport from Synapse-to-Nucleus and the Regulation of Gene Expression
Karpova, A., Andres‐Alonso, M., Grochowska, K. M., & Kreutz, M. R. (2024) · Springer eBooks · doi:10.1007/978-3-031-68550-7_3
Epigenetic Mechanisms of Autism Spectrum Disorders
Yan, Z. (2024) · Springer eBooks · doi:10.1007/978-3-031-32035-4_103-1
Self-citationTargeting Epigenetic Enzymes for Treatment of Autism Spectrum Disorders
Yan, Z. (2024) · Springer eBooks · doi:10.1007/978-3-031-32035-4_176-1
Self-citationParsa, M., Mansouri, M., & Pouretemad, H. (2025) · Brain Research Bulletin · doi:10.1016/j.brainresbull.2025.111419
Pharmacoepigenetics of autism spectrum disorder
Hamza, M., Halayem, S., Mrad, R., & Belhadj, A. (2025) · Elsevier eBooks · doi:10.1016/b978-0-443-18722-3.00017-7
The epigenetic constellation of neurodevelopment disorders
Cacabelos, R. (2025) · Elsevier eBooks · doi:10.1016/b978-0-443-18722-3.00031-1
Targeting Epigenetic Enzymes for Treatment of Autism Spectrum Disorders
Yan, Z. (2025) · Springer eBooks · doi:10.1007/978-3-031-73368-0_176
Self-citationUncovering the genetic underpinnings for different psychiatric disorder combinations
Yin, L., Liu, M., Shi, Y., Zhang, R., Lui, S. S. Y., & So, H. (2025) · Psychological Medicine · doi:10.1017/s0033291725101396
Additional file 5 of Exploratory analysis of L1 retrotransposons expression in autism
Spirito, G., Filosi, M., Domenici, E., Mangoni, D., Gustincich, S., & Sanges, R. (2024) · Figshare · doi:10.6084/m9.figshare.26600515
Chu, M.-C., Wu, H.-F., Lee, C.-W., Chung, Y.-J., Chi, H., Chen, P. S., & Lin, H.-C. (2022) · Figshare · doi:10.6084/m9.figshare.20295820
Lopez-Rodriguez, A. B., Murray, C., Kealy, J., Towns, C., Roche, A., Nazmi, A., Doran, M. M., Lowry, J. P., & Cunningham, C. M. (2024) · Figshare · doi:10.6084/m9.figshare.26640700
Additional file 3 of Exploratory analysis of L1 retrotransposons expression in autism
Spirito, G., Filosi, M., Domenici, E., Mangoni, D., Gustincich, S., & Sanges, R. (2024) · Figshare · doi:10.6084/m9.figshare.26600509
Additional file 1 of Exploratory analysis of L1 retrotransposons expression in autism
Spirito, G., Filosi, M., Domenici, E., Mangoni, D., Gustincich, S., & Sanges, R. (2024) · Figshare · doi:10.6084/m9.figshare.26600503
Additional file 4 of Exploratory analysis of L1 retrotransposons expression in autism
Spirito, G., Filosi, M., Domenici, E., Mangoni, D., Gustincich, S., & Sanges, R. (2024) · Figshare · doi:10.6084/m9.figshare.26600512
Additional file 2 of Exploratory analysis of L1 retrotransposons expression in autism
Spirito, G., Filosi, M., Domenici, E., Mangoni, D., Gustincich, S., & Sanges, R. (2024) · Figshare · doi:10.6084/m9.figshare.26600506
Zhu, F., Shi, Q., Jiang, Y.-H., Zhang, Y. Q., & Zhao, H. (2024) · Figshare · doi:10.6084/m9.figshare.26675114
Additional file 6 of Exploratory analysis of L1 retrotransposons expression in autism
Spirito, G., Filosi, M., Domenici, E., Mangoni, D., Gustincich, S., & Sanges, R. (2024) · Figshare · doi:10.6084/m9.figshare.26600518
Wu, Y., Liang, N., He, F., & Tan, B. (2026) · Gene · doi:10.1016/j.gene.2026.150070
Diaz, L., Kong, A. X., Zhang, P., Jinhua, C. H. I., Pham, K. T., Johnson, M., Eno, A. F., Douglas, I., Mao, Y., MacDonald, J. K., et al. (2026) · eLife · doi:10.7554/elife.110280.1
Diaz, L., Kong, A. X., Zhang, P., Jinhua, C. H. I., Pham, K. T., Johnson, M., Eno, A. F., Douglas, I., Mao, Y., MacDonald, J. K., et al. (2026) · eLife · doi:10.7554/elife.110280
Ren, Y., Saleem, K., Patel, P. J., Lee, Y.-H., Feng, J., & Yan, Z. (2026) · Journal of Alzheimer s Disease · doi:10.1177/13872877261427770
Self-citationThejaswini, J., Negetha, V. K., & Rajan, K. E. (2026) · Developmental Neuroscience · doi:10.1159/000551210 · Cited by 1
Janner, D. E., de Figueiredo, F. M., Brinck, A. D. M., Meichtry, L. B., de Almeida, P. P., Musachio, E. A. S., Fernandes, E. J., Mustafa, M. M. D., Prigol, M., & Guerra, G. P. (2026) · Chemico-Biological Interactions · doi:10.1016/j.cbi.2026.112147
Dale, R. C., Nishida, H., Han, V. X., Keating, B. A., Zyner, K. G., Hayes, J. P., Gloss, B., Aryamanesh, N., Dey, P., Marshall, L. L., et al. (2026) · Research Square · doi:10.21203/rs.3.rs-9529401/v1
TAKABA, S., Banda, N., Doya, R., Soe, N. C., Ogasawara, K., Hirai, A., Ikenaka, Y., Ishizuka, M., & Nakayama, S. M. M. (2026) · Journal of Veterinary Medical Science · doi:10.1292/jvms.25-0549
Liu, D., Tao, K., Wang, Y., Sun, Y., & Wang, S. (2026) · Molecular Neurobiology · doi:10.1007/s12035-026-06035-z · Cited by 1
β-hydroxybutyrate restores social deficits by suppressing HDAC9 in the ACC of Shank3B-deficient mice
Hu, E., Li, J., Qi, C., Ge, J., Li, Y., Xue, Q., Wu, S., & Wang, W. (2026) · EMBO Molecular Medicine · doi:10.1038/s44321-026-00491-9
Carballo, L. G. H., Senek, R., Novototskaya-Vlasova, K., Li, P., Pletnikov, M., & Yan, Z. (2026) · Brain Communications · doi:10.1093/braincomms/fcag286
Self-citationMa, K., Webb, M., Newton, S. S., Lee, F. S., & Qin, L. (2026) · Frontiers in Neuroscience · doi:10.3389/fnins.2026.1864866
Self-citationMidzyanovskaya, I. S. (2026) · Exploration of neuroscience · doi:10.37349/en.2026.1006145
Metadata
- Authors
- Qin, L., Ma, K., Wang, Z.-J., Hu, Z., Matas, E., Wei, J., & Yan, Z.
- Affiliations
- University at Buffalo, State University of New York (US)
- Corresponding author
- Yan, Zhen
- Venue
- Nature Neuroscience
- Published
- 2018-03-12
- Volume
- 21
- Issue
- 4
- Pages
- 564-575
- ISSN
- 1097-6256 (ISSN-L)
- 1546-1726
- PMC
- PMC5876144
- OpenAlex
- W2790053528
- Cited by
- 240
- References
- 48
- Citations by year
- 2026: 19 · 2025: 28 · 2024: 33 · 2023: 30 · 2022: 35 · 2021: 35 · 2020: 21 · 2019: 28 · 2018: 10
- FWCI
- 14.41
- Type
- journal article
- Language
- en
- Update notices
- correction (2018-06-05)
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Nature Neuroscience (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Nancy Lurie Marks Family Foundation
- National Institutes of Health
- National Institute of Mental Health (R41MH112237, R01MH108842)
- National Institute on Drug Abuse (R01DA037618)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Life Sciences › Neuroscience › Cognitive Neuroscience › Autism Spectrum Disorder Research
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Keywords
- SHANK3, autism spectrum disorder, social dysfunction, HDAC2, histone deacetylase inhibition, romidepsin, β-catenin, epigenetic regulation, NMDA receptor, GRIN2A, actin cytoskeleton, prefrontal cortex, chromatin remodeling
- MeSH terms
- Animals, Autistic Disorder, Disease Models, Animal, Exploratory Behavior, Gene Expression Regulation, Grooming, Histone Deacetylases, Locomotion, Male, Mice, Inbred C57BL, Mice, Transgenic, Microfilament Proteins, Nerve Tissue Proteins, Psychomotor Performance, Social Behavior Disorders, Prefrontal Cortex, Depsipeptides, Mice, Synaptic Potentials, Histone Deacetylase Inhibitors
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review