MicroRNA profiling reveals distinct profiles for tissue-derived and cultured endothelial cells
Open accessAbstract
Endothelial plasticity enables the cells to switch their phenotype according to the surrounding vascular microenvironment. MicroRNAs (miRNAs) are small noncoding RNAs that control endothelial plasticity. The objective of this study was to investigate the differences in miRNA profiles of tissue-derived cells and cultured endothelial cells. To this end, miRNA expression was profiled from freshly isolated tissue-derived human vascular endothelial cells and endothelial cells cultured until cellular senescence using miRNA sequencing. In addition, the data was searched for putative novel endothelial miRNAs and miRNA isoforms. The data analysis revealed a striking change in endothelial miRNA profile as the cells adapted from tissue to cell culture environment and the overall miRNA expression decreased significantly in cultured compared to tissue-derived endothelial cells. In addition to changes in mechanosensitive miRNA expression, alterations in senescence-associated and endothelial-to-mesenchymal-transition-associated miRNAs were observed in aging cells. Collectively, the data illustrates the adaptability of endothelial cell miRNA expression that mirrors prevailing cellular environment.
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Ex vivo conditions are known to sometimes dramatically alter miRNA expression patterns, as seen for passaged endothelial cells.
“Ex vivo conditions are known to sometimes dramatically alter miRNA expression patterns, as seen for passaged endothelial cells [24].”
From A curated human cellular microRNAome based on 196 primary cell types (2022) · cites this paper as [24]
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The Keap1-Nrf2 System: A Mediator between Oxidative Stress and Aging
Yu, C., & Xiao, J.-H. (2021) · Oxidative Medicine and Cellular Longevity · doi:10.1155/2021/6635460 · Cited by 537 · see citing works
A curated human cellular microRNAome based on 196 primary cell types
Patil, A. H., Baran, A., Brehm, Z. P., McCall, M. N., & Halushka, M. K. (2022) · GigaScience · doi:10.1093/gigascience/giac083 · Cited by 30 · see citing works
- Authors
- Kuosmanen, S. M., Kansanen, E., Sihvola, V., & Levonen, A.-L.
- Affiliations
- University of Eastern Finland (FI)
- Corresponding author
- Levonen, Anna-Liisa
- Venue
- Scientific Reports
- Published
- 2017-09-08
- Volume
- 7
- Issue
- 1
- Pages
- 10943-10943
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC5591252
- OpenAlex
- W2753544039
- Cited by
- 48
- References
- 6
- Citations by year
- 2026: 1 · 2025: 3 · 2024: 2 · 2023: 7 · 2022: 10 · 2021: 6 · 2020: 6 · 2019: 4 · 2018: 8 · 2017: 1
- FWCI
- 1.76
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Scientific Reports (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- UEF eRepo (University of Eastern Finland) (submittedVersion, cc-by)
- Funders
- Academy of Finland
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Angiogenesis and VEGF in Cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Telomeres, Telomerase, and Senescence
- Keywords
- miRNA expression profiling, endothelial plasticity, cultured endothelial cells, cellular senescence, endothelial-to-mesenchymal transition, novel miRNAs, miRNA isoforms, vascular microenvironment
- MeSH terms
- Humans, Cellular Senescence, Gene Expression Profiling, MicroRNAs, Mechanotransduction, Cellular, Transcriptome, Human Umbilical Vein Endothelial Cells
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