Moonlight controls lunar-phase-dependency and regular oscillation of clock gene expressions in a lunar-synchronized spawner fish, Goldlined spinefoot
Open accessAbstract
Goldlined spinefoot, Siganus guttatus, inhabits tropical and subtropical waters and synchronizes its spawning around the first quarter moon likely using an hourglass-like lunar timer. In previous studies, we have found that clock genes (Cryptochrome3 and Period1) could play the role of state variable in the diencephalon when determining the lunar phase for spawning. Here, we identified three Cry, two Per, two Clock, and two Bmal genes in S. guttatus and investigated their expression patterns in the diencephalon and pituitary gland. We further evaluated the effect on their expression patterns by daily interruptions of moonlight stimuli for 1 lunar cycle beginning at the new moon. It significantly modified the expression patterns in many of the examined clock(-related) genes including Cry3 in the diencephalon and/or pituitary gland. Acute interruptions of moonlight around the waxing gibbous moon upregulated nocturnal expressions of Cry1b and Cry2 in the diencephalon and pituitary gland, respectively, but did not affect expression levels of the other clock genes. These results highlighted the importance of repetitive moonlight illumination for stable or lunar-phase-specific daily expression of clock genes in the next lunar cycle that may be important for the lunar-phase-synchronized spawning on the next first quarter moon.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Moonlight interruption markedly impacted the expression levels, cycle amplitude and daily pattern of clock genes in diencephalon and pituitary gland of Siganus guttatus.
“A deeper analysis of clock genes oscillations in diencephalon and pituitary gland over the lunar cycle revealed that moonlight interruption (by tank coverage) markedly impacted on the expression levels, cycle amplitude and daily pattern [29].”
From The Still Dark Side of the Moon: Molecular Mechanisms of Lunar-Controlled Rhythms and Clocks (2020) · cites this paper as [29]
In the diencephalon of Siganus guttatus, the most remarkable effects of moonlight deprivation occurred counterintuitively during NM.
“Curiously, the most remarkable effects of moonlight deprivation reported in the diencephalon occurred counterintuitively during NM (Figure 2).”
From The Still Dark Side of the Moon: Molecular Mechanisms of Lunar-Controlled Rhythms and Clocks (2020) · cites this paper as [29]
In the pituitary of Siganus guttatus, cry1a and cry2 levels were higher in almost all lunar phases in moonlight-deprived specimens, as well as per2a and per2b.
“In the pituitary, cry1a and cry2 levels were higher in almost all lunar phases in moonlight-deprived specimens, as well as per2a and per2b.”
From The Still Dark Side of the Moon: Molecular Mechanisms of Lunar-Controlled Rhythms and Clocks (2020) · cites this paper as [29]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Trimmomatic: a flexible trimmer for Illumina sequence data
Bolger, A. M., Lohse, M., & Usadel, B. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu170 · Cited by 65,548 · see citing works
BLAST+: architecture and applications
Camacho, C., Coulouris, G., Avagyan, V., Ma, N., Papadopoulos, J., Bealer, K., & Madden, T. L. (2009) · BMC Bioinformatics · doi:10.1186/1471-2105-10-421 · Cited by 22,074 · see citing works
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Grabherr, M. G., Haas, B. J., Yassour, M., Levin, J. Z., Thompson, D. A., Amit, I., Adiconis, X., Fan, L., Raychowdhury, R., Zeng, Q., et al. (2011) · Nature Biotechnology · doi:10.1038/nbt.1883 · Cited by 20,776 · see citing works
Quality control and preprocessing of metagenomic datasets
Schmieder, R., & Edwards, R. A. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr026 · Cited by 4,989 · see citing works
Coordination of circadian timing in mammals
Reppert, S. M., & Weaver, D. R. (2002) · Nature · doi:10.1038/nature00965 · Cited by 4,379 · see citing works
Molecular components of the mammalian circadian clock
Ko, C. H., & Takahashi, J. S. (2006) · Human Molecular Genetics · doi:10.1093/hmg/ddl207 · Cited by 1,657 · see citing works
Mass spawning in tropical reef corals
Harrison, P. L., Babcock, R. C., Bull, G. D., Oliver, J. K., Wallace, C. C., & Willis, B. L. (1984) · Science · doi:10.1126/science.223.4641.1186 · Cited by 763 · see citing works
Bromage, N., Porter, M. J. R., & Randall, C. (2001) · Aquaculture · doi:10.1016/s0044-8486(01)00583-x · Cited by 744 · see citing works
Current knowledge on the melatonin system in teleost fish
Falcón, J., Migaud, H., Muñoz‐Cueto, J. A., & Carrillo, M. (2009) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2009.04.026 · Cited by 469 · see citing works
Levy, O., Appelbaum, L., Leggat, W., Gothlif, Y., Hayward, D. C., Miller, D. J., & Hoegh-Guldberg, O. (2007) · Science · doi:10.1126/science.1145432 · Cited by 263 · see citing works
Oster, H., Damerow, S., Hut, R. A., & Gregor Eichele, C. (2006) · Journal of Biological Rhythms · doi:10.1177/0748730406293053 · Cited by 231 · see citing works
Gwinner, E. (2003) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2003.10.010 · Cited by 231 · see citing works
External and internal controls of lunar‐related reproductive rhythms in fishes
Takemura, A., Rahman, M. S., & Park, Y. J. (2010) · Journal of Fish Biology · doi:10.1111/j.1095-8649.2009.02481.x · Cited by 158 · see citing works
Self-citationCircadian and circalunar clock interactions in a marine annelid
Zantke, J., Ishikawa-Fujiwara, T., Arboleda, E., Lohs, C., Schipany, K., Hallay, N., Straw, A. D., Todo, T., & Tessmar-Raible, K. (2013) · Cell Reports · doi:10.1016/j.celrep.2013.08.031 · Cited by 148 · see citing works
Intrinsic photosensitivity of a deep brain photoreceptor
Nakane, Y., Shimmura, T., Abe, H., & Yoshimura, T. (2014) · Current Biology · doi:10.1016/j.cub.2014.05.038 · Cited by 122 · see citing works
Takemura, A., Susilo, E. S., Rahman, M. D. S., & Morita, M. (2004) · Journal of Experimental Zoology Part A Comparative Experimental Biology · doi:10.1002/jez.a.105 · Cited by 91 · see citing works
Self-citationIdentification of rhodopsin in the pigeon deep brain
Wada, Y., Okano, T., Adachi, A. A., Ebihara, S., & Fukada, Y. (1998) · FEBS Letters · doi:10.1016/s0014-5793(98)00138-0 · Cited by 84 · see citing works
Self-citationIshikawa, T., Hirayama, J., Kobayashi, Y., & Todo, T. (2002) · Genes to Cells · doi:10.1046/j.1365-2443.2002.00579.x · Cited by 78 · see citing works
de Vlaming, V. L. (1975) · Biological Bulletin · doi:10.2307/1540517 · Cited by 73 · see citing works
Insect circadian rhythms and photoperiodism
Saunders, D. S. (1997) · Invertebrate Neuroscience · doi:10.1007/bf02480370 · Cited by 65 · see citing works
Sugama, N., Park, J., Park, Y., Takeuchi, Y., Kim, S., & Takemura, A. (2008) · Journal of Pineal Research · doi:10.1111/j.1600-079x.2008.00566.x · Cited by 54 · see citing works
Self-citationMolecular mechanism of the photoperiodic response of gonads in birds and mammals
Yoshimura, T. (2005) · Comparative Biochemistry and Physiology Part A Molecular & Integrative Physiology · doi:10.1016/j.cbpa.2005.09.009 · Cited by 52 · see citing works
A deep brain photoreceptive molecule in the toad hypothalamus
Yoshikawa, T., Okano, T., Oishi, T., & Fukada, Y. (1998) · FEBS Letters · doi:10.1016/s0014-5793(98)00139-2 · Cited by 50 · see citing works
Self-citationFukushiro, M., Takeuchi, T., Takeuchi, Y., Hur, S.-P., Sugama, N., Takemura, A., Kubo, Y., Okano, K., & Okano, T. (2011) · PLoS ONE · doi:10.1371/journal.pone.0028643 · Cited by 47 · see citing works
Self-citationPhotoreception and circadian clock system of the chicken pineal gland
Okano, T., & Fukada, Y. (2001) · Microscopy Research and Technique · doi:10.1002/jemt.1070 · Cited by 45 · see citing works
Self-citationCircannual Rhythms of Gonadal Maturation in Female Rainbow Trout (Oncorhynchus mykiss)
Duston, J., & Bromage, N. (1991) · Journal of Biological Rhythms · doi:10.1177/074873049100600106 · Cited by 44 · see citing works
Molecular cloning and daily variations of the Period gene in a reef fish Siganus guttatus
Park, J., Park, Y., Sugama, N., Kim, S., & Takemura, A. (2006) · Journal of Comparative Physiology A · doi:10.1007/s00359-006-0194-6 · Cited by 43 · see citing works
Self-citationToloza‐Villalobos, J., Arroyo, J. I., & Opazo, J. C. (2014) · Journal of Molecular Evolution · doi:10.1007/s00239-014-9660-x · Cited by 41 · see citing works
Herrera‐Pérez, P., Rendón, M. D. C., Laurence Besseau, A., Sauzet, S., Falcón, J., & Muñoz‐Cueto, J. A. (2010) · The Journal of Comparative Neurology · doi:10.1002/cne.22408 · Cited by 41 · see citing works
Rahman, M. S., Takemura, A., & Takano, K. (2002) · General and Comparative Endocrinology · doi:10.1006/gcen.2001.7708 · Cited by 30 · see citing works
Self-citationTakeuchi, Y., Imamura, S., Sawada, Y., Hur, S., & Takemura, A. (2014) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2014.05.015 · Cited by 23 · see citing works
Self-citationToda, R., Okano, K., Takeuchi, Y., Yamauchi, C., Fukushiro, M., Takemura, A., & Okano, T. (2014) · PLoS ONE · doi:10.1371/journal.pone.0109119 · Cited by 20 · see citing works
Self-citationTakeuchi, Y., Hada, N., Imamura, S., Hur, S., Bouchekioua, S., & Takemura, A. (2015) · Comparative Biochemistry and Physiology Part A Molecular & Integrative Physiology · doi:10.1016/j.cbpa.2015.06.010 · Cited by 12 · see citing works
Self-citationCircannual rhythm in the varied carpet beetle, Anthrenus verbasci
Miyazaki, Y., Nisimura, T., & Numata, H. (2012) · Progress in brain research · doi:10.1016/b978-0-444-59427-3.00025-3 · Cited by 11 · see citing works
Flagged first, then by citations
1 of the 35 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
The Still Dark Side of the Moon: Molecular Mechanisms of Lunar-Controlled Rhythms and Clocks
Andreatta, G., & Tessmar-Raible, K. (2020) · Journal of Molecular Biology · doi:10.1016/j.jmb.2020.03.009 · Cited by 111 · see citing works
Decoupling behavioral and transcriptional responses to color in an eyeless cnidarian
Leach, W. B., & Reitzel, A. M. (2020) · BMC Genomics · doi:10.1186/s12864-020-6766-y · Cited by 22 · see citing works
Evidence that the woman’s ovarian cycle is driven by an internal circamonthly timing system
Écochard, R., Stanford, J. B., Fehring, R. J., Schneider, M., Najmabadi, S., & Gronfier, C. (2024) · Science Advances · doi:10.1126/sciadv.adg9646 · Cited by 19 · see citing works
Lunar Cycle Influences Reproductive Performance of Crossbred Brahman Cows Under Tropical Conditions
Aguirre, A. A., Palomares, R. A., Ondiz, A. D., Soto, E. R., Perea, M. S., Hernández–Fonseca, H., & Perea, F. P. (2021) · Journal of Biological Rhythms · doi:10.1177/0748730420983638 · Cited by 18 · see citing works
Komada, Y., Sato, M., Ikeda, Y., Kami, A., Masuda, C., & Shibata, S. (2021) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph18063245 · Cited by 18 · see citing works
Fukunaga, K., Yamashina, F., Ohta, N., Mizuno, H., Takeuchi, Y., Yamauchi, C., & Takemura, A. (2019) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2019.113211 · Cited by 17 · see citing works
Self-citationSaltzman, J. R., & White, E. (2023) · Marine Ecology Progress Series · doi:10.3354/meps14435 · Cited by 11 · see citing works
Fukunaga, K., Yamashina, F., Takeuchi, Y., Yamauchi, C., & Takemura, A. (2020) · BMC Zoology · doi:10.1186/s40850-020-00060-8 · Cited by 10 · see citing works
Self-citationOkano, K., Saratani, Y., Tamasawa, A., Shoji, Y., Riko, T., & Okano, T. (2020) · Scientific Reports · doi:10.1038/s41598-020-61877-4 · Cited by 9 · see citing works
Self-citationPerea, M. F., Carrillo, D. A. P., Corredor, Z. A., González, M., Hernandez-Fonseca, H., & Perea, F. P. (2022) · Journal of Biological Rhythms · doi:10.1177/07487304211069453 · Cited by 9 · see citing works
Golmoradizadeh, A., Noori, A., & Amiri, B. M. (2021) · Coral Reefs · doi:10.1007/s00338-021-02183-x · Cited by 8 · see citing works
Saha, S., Singh, K. M., & Gupta, B. B. P. (2020) · Biological Rhythm Research · doi:10.1080/09291016.2020.1728922 · Cited by 7 · see citing works
Cloud cover disrupts the influence of the lunar cycle on the growth of peat moss Sphagnum riparium
Mironov, V. L. (2021) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2021.104727 · Cited by 7 · see citing works
Ma, H., Yang, M. S., Zhang, Y., Qiu, H. T., You, X., Chen, S. X., & Hong, W. (2021) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2021.113926 · Cited by 5 · see citing works
Lunar cycle-mediated behaviours in animals, including humans
Mandal, F. B. (2023) · Israel Journal of Ecology and Evolution · doi:10.1163/22244662-bja10060 · Cited by 3 · see citing works
Fukunaga, K., Takeuchi, Y., Yamauchi, C., & Takemura, A. (2022) · Biological Rhythm Research · doi:10.1080/09291016.2022.2046416 · Cited by 3 · see citing works
Self-citationSaha, S., Singh, K. M., & Gupta, B. B. P. (2018) · Biological Rhythm Research · doi:10.1080/09291016.2018.1525139 · Cited by 3 · see citing works
Saratani, Y., Takeuchi, Y., Okano, K., & Okano, T. (2020) · ZOOLOGICAL SCIENCE · doi:10.2108/zs190110 · Cited by 2 · see citing works
Self-citationYamashina, F., Zhu, Y., Takeuchi, Y., Yamauchi, C., Fukunaga, K., Udagawa, S., & Takemura, A. (2023) · Biological Rhythm Research · doi:10.1080/09291016.2023.2247801 · Cited by 2 · see citing works
Self-citationSaha, S., Singh, K. M., & Gupta, B. B. P. (2021) · Biological Rhythm Research · doi:10.1080/09291016.2021.1911550 · Cited by 2 · see citing works
Mironov, V. L., & Linkevich, E. V. (2024) · Chronobiology International · doi:10.1080/07420528.2024.2365825 · Cited by 1 · see citing works
Changes in Melatonin and Dopamine Secretion During Ovarian Development in Japanese Eel
Byun, J., Hyeon, J.-Y., & Hur, S. (2024) · Ocean Science Journal · doi:10.1007/s12601-024-00196-5 · Cited by 1 · see citing works
Miller, C. R., Taff, C. C., Uehling, J. J., Rose, A. P., & Vitousek, M. N. (2025) · Behavioral Ecology and Sociobiology · doi:10.1007/s00265-025-03567-7 · Cited by 1 · see citing works
When fishers guide scientific exploration: Case study with ‘ōpelu in Hawai‘i
Mukai, G. N. M., Iwane, M., Suca, J. J., Tanaka, K. R., Moran, A. L., & Kobayashi, D. R. (2025) · Marine and Coastal Fisheries · doi:10.1093/mcfafs/vtae002 · Cited by 1 · see citing works
Current knowledge of lunar synchronized spawning in fish
Fukunaga, K., & Takemura, A. (2025) · Chronobiology International · doi:10.1080/07420528.2025.2591924 · Cited by 1 · see citing works
Self-citationYamauchi, C., Takeuchi, Y., & Takemura, A. (2020) · Aquaculture Studies · doi:10.4194/2618-6381-v20_1_02 · Cited by 1 · see citing works
Self-citationFukada, Y. (2023) · Biophysics and Physicobiology · doi:10.2142/biophysico.bppb-v20.s013 · Cited by 1 · see citing works
Swann, J. M., & Hall, E. (2019) · Springer eBooks · doi:10.1007/978-3-319-47829-6_770-1
Swann, J. M., & Hall, E. (2022) · Springer eBooks · doi:10.1007/978-3-319-55065-7_770
- Authors
- Takeuchi, Y., Kabutomori, R., Yamauchi, C., Miyagi, H., Takemura, A., Okano, K., & Okano, T.
- Affiliations
- Waseda University (JP)
- University of the Ryukyus (JP)
- Corresponding author
- Okano, Toshiyuki
- Venue
- Scientific Reports
- Published
- 2018-04-18
- Volume
- 8
- Issue
- 1
- Pages
- 6208-6208
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC5906463
- OpenAlex
- W2882982493
- Cited by
- 30
- References
- 35
- Citations by year
- 2025: 3 · 2024: 3 · 2023: 4 · 2022: 4 · 2021: 6 · 2020: 7 · 2019: 2 · 2018: 1
- FWCI
- 2.25
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Scientific Reports (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, other-oa)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Funders
- Waseda University
- University of the Ryukyus
- Japan Society for the Promotion of Science (18K14523, 18K19348, 16K18753)
- Topics
- Life Sciences › Neuroscience › Endocrine and Autonomic Systems › Circadian rhythm and melatonin
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Physiology › Reproductive biology and impacts on aquatic species
- Physical Sciences › Environmental Science › Ecology › Physiological and biochemical adaptations
- Keywords
- moonlight, lunar phases, clock genes, circadian rhythm, spawning synchrony, Siganus guttatus, cryptochrome, period gene, clock gene expression, diencephalon, pituitary gland, light interruption
- MeSH terms
- Animals, Circadian Rhythm, Fishes, Gene Expression Regulation, Moon, Gene Expression Profiling, CLOCK Proteins, Transcriptome
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review