Transcriptome analysis for phosphorus starvation-induced lipid accumulation in Scenedesmus sp
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Phosphorus stress was applied to enhance the lipid production in Scenedesmus sp. The highest lipid production (350 mg L−1) and lipid content (approximately 41.0% of dry weight) were obtained by addition of 2 mg L−1 NaH 2 PO 4·2H 2 O every 2 days, which were higher than those in replete phosphorus. Correspondingly, carbohydrate content decreased significantly. We speculated that phosphorus limitation could block starch biosynthesis, and photosynthate flow tended to fatty acid biosynthesis to cope with stress. To investigate the mechanism that phosphorus stress triggers the carbon fixation to lipid biosynthesis, the transcriptome analysis was carried out by the Illumina RNA-seq platform. A total of 2897 genes were identified as differentially expressed genes. The observed overexpression of lipid production under phosphorus stress was bolstered by up-regulation of genes encoding for DGAT and pyruvate kinase, activation of carbohydrate metabolism pathway and fatty acid biosynthesis, and repression of carbohydrate synthesis-presumably to shunt the carbon flux toward TAG biosynthesis. The transcriptome will be useful to understand the lipid metabolism pathway and obtain the engineering economic algae species aimed at biodiesel production.
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Analysis of gene expression involved in lipid production at the transcriptome level in microalgae has offered valuable insights into metabolic pathways and contextual information regarding genomic-level modifications in algae.
“In recent years, analysis of gene expression involved in lipid production at the transcriptome level in microalgae has offered valuable insights into metabolic pathways, as well as contextual information regarding modifications at the genomic level in algae [231–234].”
From Microalgae biofuels: illuminating the path to a sustainable future amidst challenges and opportunities (2024) · cites this paper as [231]
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“In recent years, analysis of gene expression involved in lipid production at the transcriptome level in microalgae has offered valuable insights into metabolic pathways, as well as contextual information regarding modifications at the genomic level in algae [231–234].”
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- Authors
- Yang, F., Xiang, W., Li, T., & Long, L.
- Affiliations
- Chinese Academy of Sciences (CN)
- Corresponding author
- Long, Lijuan
- Venue
- Scientific Reports
- Published
- 2018-11-06
- Volume
- 8
- Issue
- 1
- Pages
- 16420-16420
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC6219579
- OpenAlex
- W2899389454
- Cited by
- 109
- References
- 4
- Citations by year
- 2026: 16 · 2025: 20 · 2024: 19 · 2023: 13 · 2022: 16 · 2021: 13 · 2020: 8 · 2019: 4
- FWCI
- 1.44
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Scientific Reports (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, other-oa)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Funders
- the Strategic Priority Research Program of the Chinese Academy of Sciences
- Topics
- Physical Sciences › Energy › Renewable Energy, Sustainability and the Environment › Algal biology and biofuel production
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Lipid metabolism and biosynthesis
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Microbial Metabolic Engineering and Bioproduction
- Keywords
- phosphorus deficiency, lipid accumulation, Scenedesmus, microalgae, transcriptome, fatty acid synthesis, triglyceride synthesis, starch biosynthesis, carbohydrate metabolism, pyruvate kinase, diacylglycerol acyltransferase, carbon flux, biodiesel, differentially expressed genes
- MeSH terms
- Phosphorus, Starch, Stress, Physiological, Gene Expression Profiling, Scenedesmus, Lipid Metabolism
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