The DOI matches its Crossref record; 256 of the 256 references it cites were found in a registry or an index.
Graph theory and networks in Biology
Open accessAbstract
A survey of the use of graph theoretical techniques in Biology is presented. In particular, recent work on identifying and modelling the structure of bio-molecular networks is discussed, as well as the application of centrality measures to interaction networks and research on the hierarchical structure of such networks and network motifs. Work on the link between structural network properties and dynamics is also described, with emphasis on synchronisation and disease propagation.
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Cites
Collective dynamics of ‘small-world’ networks
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Barabási, A.-L., & Albert, R. (1999) · Science · doi:10.1126/science.286.5439.509 · Cited by 36,135
KEGG: Kyoto Encyclopedia of Genes and Genomes
Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H., & Kanehisa, M. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.1.29 · Cited by 31,232
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The Structure and Function of Complex Networks
Newman, M. E. J. (2003) · SIAM Review · doi:10.1137/s003614450342480 · Cited by 18,719
Social Network Analysis: Methods and Applications
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Social Network Analysis: Methods and Applications
Wasserman, S., & Faust, K. (1994) · doi:10.1017/cbo9780511815478 · Cited by 17,557
The anatomy of a large-scale hypertextual Web search engine
Brin, S., & Page, L. (1998) · Computer Networks and ISDN Systems · doi:10.1016/s0169-7552(98)00110-x · Cited by 16,004
Cited by
Modular cell biology: retroactivity and insulation
Del Vecchio, D., Ninfa, A. J., & Sontag, E. D. (2008) · Molecular Systems Biology · doi:10.1038/msb4100204 · Cited by 519
A review of network-based approaches to drug repositioning
Lotfi Shahreza, M., Ghadiri, N., Mousavi, S. R., Varshosaz, J., & Green, J. R. (2018) · Briefings in Bioinformatics · doi:10.1093/bib/bbx017 · Cited by 330
Dale, M. R. T., & Fortin, M.-J. (2010) · Annual Review of Ecology, Evolution, and Systematics · doi:10.1146/annurev-ecolsys-102209-144718 · Cited by 265
Iwamura, T., Possingham, H. P., Chadès, I., Minton, C., Murray, N. J., Rogers, D. I., Treml, E. A., & Fuller, R. A. (2013) · Proceedings of the Royal Society B: Biological Sciences · doi:10.1098/rspb.2013.0325 · Cited by 263
AvgNet: Adaptive Visibility Graph Neural Network and Its Application in Modulation Classification
Xuan, Q., Zhou, J., Qiu, K., Chen, Z., Xu, D., Zheng, S., & Yang, X. (2022) · IEEE Transactions on Network Science and Engineering · doi:10.1109/tnse.2022.3146836 · Cited by 106
“At present, biology, social science, computer science and other disciplines have a wealth of graph data [3], [4], [5], so that researchers can make full use of network analysis technologies to solve related problems in the corresponding fields.”
Metadata
- Authors
- Mason, O., & Verwoerd, M.
- Venue
- IET Systems Biology
- Published
- 2007-03-19
- Volume
- 1
- Issue
- 2
- Pages
- 89-119
- ISSN
- 1751-8849 (ISSN-L)
- 1751-8857
- OpenAlex
- W2088062845
- Cited by
- 398
- References
- 256
- FWCI
- 8.14
- Type
- journal article
- Language
- en
- Open access
- green
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Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
