The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.
Relation between stability and resilience determines the performance of early warning signals under different environmental drivers
Open accessAbstract
Significance: Alternative stable states and critical transitions are widespread in nature and can have profound consequences for conservation, climate changes, and human health. Our current toolbox of early warning signals before critical transitions has seen both successes and failures. Understanding the limitations of these indicators is crucial for application in real-world scenarios. In this study, we explored the population dynamics of laboratory yeast under different forms of environmental deterioration. We found that the performance of early warning signals under different environmental drivers is determined by the underlying relation between stability and resilience. This work presents a framework to evaluate the utility of early warning signals, and it sets a foundation for further studies on how dynamical systems respond to environmental changes.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Early-warning signals for critical transitions
Scheffer, M., Bascompte, J., Brock, W. A., Brovkin, V., Carpenter, S. R., Dakos, V., Held, H., van Nes, E. H., Rietkerk, M., & Sugihara, G. (2009) · Nature · doi:10.1038/nature08227 · Cited by 4,854
Anticipating Critical Transitions
Scheffer, M., Carpenter, S. R., Lenton, T. M., Bascompte, J., Brock, W., Dakos, V., van de Koppel, J., van de Leemput, I. A., Levin, S. A., van Nes, E. H., et al. (2012) · Science · doi:10.1126/science.1225244 · Cited by 2,208
Systemic risk in banking ecosystems
Haldane, A. G., & May, R. M. (2011) · Nature · doi:10.1038/nature09659 · Cited by 1,480
Conditional Heteroskedasticity Forecasts Regime Shift in a Whole-Ecosystem Experiment
Seekell, D. A., Carpenter, S. R., Cline, T. J., & Pace, M. L. (2012) · Ecosystems · doi:10.1007/s10021-012-9542-2 · Cited by 53
Flagged first, then by citations
Research works printed but not linked: 51
- KS Korolev, JB Xavier, J Gore, Turning ecology and evolution against cancer. Nat Rev Cancer 14, 371–380 (2014). · DOI
- J Bryden, RJ Gill, RAA Mitton, NE Raine, VAA Jansen, Chronic sublethal stress causes bee colony failure. Ecol Lett 16, 1463–1469 (2013). · DOI
- M Hirota, M Holmgren, EH Van Nes, M Scheffer, Global resilience of tropical forest and savanna to critical transitions. Science 334, 232–235 (2011). · DOI
- AC Staver, S Archibald, SA Levin, The global extent and determinants of savanna and forest as alternative biome states. Science 334, 230–232 (2011). · DOI · Paper page
- RM May, Thresholds and breakpoints in ecosystems with a multiplicity of stable states. Nature 269, 471–477 (1977). · DOI
- TM Lenton, Environmental tipping points. Annu Rev Environ Resour 38, 1–29 (2013). · DOI
- JJ Lever, EH van Nes, M Scheffer, J Bascompte, The sudden collapse of pollinator communities. Ecol Lett 17, 350–359 (2014). · DOI
- M Scheffer Critical Transitions in Nature and Society (Princeton Univ Press, Princeton, 2009). · DOI · Paper page
- TP Hughes, S Carpenter, J Rockström, M Scheffer, B Walker, Multiscale regime shifts and planetary boundaries. Trends Ecol Evol 28, 389–395 (2013). · DOI · Paper page
- V Dakos, , Methods for detecting early warnings of critical transitions in time series illustrated using simulated ecological data. PLoS One 7, e41010 (2012). · DOI
- S Kéfi, , Early warning signals of ecological transitions: Methods for spatial patterns. PLoS One 9, e92097 (2014). · DOI
- C Kuehn, A mathematical framework for critical transitions: Bifurcations, fast–slow systems and stochastic dynamics. Physica D 240, 1020–1035 (2011). · DOI
- TM Lenton, Early warning of climate tipping points. Nat Clim Chang 1, 201–209 (2011). · DOI
- R Wang, , Flickering gives early warning signals of a critical transition to a eutrophic lake state. Nature 492, 419–422 (2012). · DOI
- M Pal, AK Pal, S Ghosh, I Bose, Early signatures of regime shifts in gene expression dynamics. Phys Biol 10, 036010 (2013). · DOI
- EH van Nes, M Scheffer, Slow recovery from perturbations as a generic indicator of a nearby catastrophic shift. Am Nat 169, 738–747 (2007). · DOI
- SR Carpenter, WA Brock, Rising variance: A leading indicator of ecological transition. Ecol Lett 9, 311–318 (2006). · DOI
- JM Drake, BD Griffen, Early warning signals of extinction in deteriorating environments. Nature 467, 456–459 (2010). · DOI
- L Dai, D Vorselen, KS Korolev, J Gore, Generic indicators for loss of resilience before a tipping point leading to population collapse. Science 336, 1175–1177 (2012). · DOI
- L Dai, KS Korolev, J Gore, Slower recovery in space before collapse of connected populations. Nature 496, 355–358 (2013). · DOI
- AJ Veraart, , Recovery rates reflect distance to a tipping point in a living system. Nature 481, 357–359 (2012). · DOI
- SR Carpenter, , Early warnings of regime shifts: A whole-ecosystem experiment. Science 332, 1079–1082 (2011). · DOI
- A Chen, A Sanchez, L Dai, J Gore, Dynamics of a producer-freeloader ecosystem on the brink of collapse. Nat Commun 5, 3713 (2014). · DOI
- RD Batt, SR Carpenter, JJ Cole, ML Pace, RA Johnson, Changes in ecosystem resilience detected in automated measures of ecosystem metabolism during a whole-lake manipulation. Proc Natl Acad Sci USA 110, 17398–17403 (2013). · DOI
- D Sornette Critical Phenomena in Natural Sciences: Chaos, Fractals, Selforganization and Disorder: Concepts and Tools (Springer Series in Synergetics) (Springer, 2nd Ed, Berlin, 2006).
- V Guttal, C Jayaprakash, Spatial variance and spatial skewness: Leading indicators of regime shifts in spatial ecological systems. Theor Ecol 2, 3–12 (2008). · DOI
- P Hohenberg, B Halperin, Theory of dynamic critical phenomena. Rev Mod Phys 49, 435–479 (1977). · DOI
- C Wissel, A universal law of the characteristic return time near thresholds. Oecologia 65, 101–107 (1984). · DOI
- V Dakos, , Slowing down as an early warning signal for abrupt climate change. Proc Natl Acad Sci USA 105, 14308–14312 (2008). · DOI
- A Hastings, DB Wysham, Regime shifts in ecological systems can occur with no warning. Ecol Lett 13, 464–472 (2010). · DOI · Paper page
- PJ Menck, J Heitzig, N Marwan, J Kurths, How basin stability complements the linear-stability paradigm. Nat Phys 9, 89–92 (2013). · DOI
- C Boettiger, N Ross, A Hastings, Early warning signals: The charted and uncharted territories. Theor Ecol 6, 255–264 (2013). · DOI
- V Dakos, SR Carpenter, EH van Nes, M Scheffer, Resilience indicators: Prospects and limitations for early warnings of regime shifts. Philos Trans R Soc B Biol Sci 370, 20130263 (2014). · DOI
- J Gore, H Youk, A van Oudenaarden, Snowdrift game dynamics and facultative cheating in yeast. Nature 459, 253–256 (2009). · DOI
- CS Holling, Resilience and stability of ecological systems. Annu Rev Ecol Syst 4, 1–23 (1973). · DOI · Paper page
- P Neubauer, OP Jensen, JA Hutchings, JK Baum, Resilience and recovery of overexploited marine populations. Science 340, 347–349 (2013). · DOI
- LES Cole, SA Bhagwat, KJ Willis, Recovery and resilience of tropical forests after disturbance. Nat Commun 5, 3906 (2014). · DOI
- C Folke, , Regime shifts, resilience, and biodiversity in ecosystem management. Annu Rev Ecol Evol Syst 35, 557–581 (2004). · DOI · Paper page
- LH Gunderson, Ecological resilience-in theory and application. Annu Rev Ecol Syst 31, 425–439 (2000). · DOI
- RJ Standish, , Resilience in ecology: Abstraction, distraction, or where the action is? Biol Conserv 177, 43–51 (2014). · DOI
- V Dakos, EH Nes, M Scheffer, Flickering as an early warning signal. Theor Ecol 6, 309–317 (2013). · DOI
- C Boettiger, A Hastings, No early warning signals for stochastic transitions: Insights from large deviation theory. Proc Biol Sci 280, 20131372 (2013).
- C Boettiger, A Hastings, Quantifying limits to detection of early warning for critical transitions. J R Soc Interface 9, 2527–2539 (2012). · DOI
- SJ Lade, T Gross, Early warning signals for critical transitions: A generalized modeling approach. PLOS Comput Biol 8, e1002360 (2012). · DOI
- F Courchamp, T Clutton-Brock, B Grenfell, Inverse density dependence and the Allee effect. Trends Ecol Evol 14, 405–410 (1999). · DOI · Paper page
- AS Downing, EH van Nes, WM Mooij, M Scheffer, The resilience and resistance of an ecosystem to a collapse of diversity. PLoS One 7, e46135 (2012). · DOI
- S Tang, S Allesina, Reactivity and stability of large ecosystems. Front Ecol Evol 2, 21 (2014). · DOI
- MG Neubert, H Caswell, Alternatives to resilience for measuring the responses of ecological systems to perturbations. Ecology 78, 653–665 (1997). · DOI
- AR Ives, SR Carpenter, Stability and diversity of ecosystems. Science 317, 58–62 (2007). · DOI
- V Grimm, C Wissel, Babel, or the ecological stability discussions: An inventory and analysis of terminology and a guide for avoiding confusion. Oecologia 109, 323–334 (1997). · DOI
- EK Costello, K Stagaman, L Dethlefsen, BJM Bohannan, DA Relman, The application of ecological theory toward an understanding of the human microbiome. Science 336, 1255–1262 (2012). · DOI · Paper page
Metadata
- Authors
- Dai, L., Korolev, K. S., & Gore, J.
- Affiliations
- Massachusetts Institute of Technology (US)
- Boston University (US)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2015-07-27
- Volume
- 112
- Issue
- 32
- Pages
- 10056-10061
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC4538670
- OpenAlex
- W1923514381
- Cited by
- 78
- References
- 4
- Citations by year
- 2026: 5 · 2025: 9 · 2024: 4 · 2023: 5 · 2022: 10 · 2021: 5 · 2020: 9 · 2019: 10 · 2018: 7 · 2017: 5 · 2016: 9
- FWCI
- 5.73
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- DSpace@MIT (Massachusetts Institute of Technology) (submittedVersion, cc-by-nc)
- Funders
- HHS | National Institutes of Health (DP2-AG044279)
- Topics
- Physical Sciences › Environmental Science › Global and Planetary Change › Ecosystem dynamics and resilience
- Physical Sciences › Mathematics › Applied Mathematics › Mathematical and Theoretical Epidemiology and Ecology Models
- Physical Sciences › Environmental Science › Nature and Landscape Conservation › Ecology and Vegetation Dynamics Studies
- Keywords
- early warning indicators, tipping points, critical slowing down, alternative stable states, yeast population dynamics, population collapse, coefficient of variation, autocorrelation, environmental drivers, basins of attraction, recovery rate
- MeSH terms
- Environment, Humans, Models, Biological, Saccharomyces cerevisiae, Time Factors
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review