The DOI matches its Crossref record; 80 of the 80 references it cites were found in a registry or an index.
Neuromolecular responses to social challenge: Common mechanisms across mouse, stickleback fish, and honey bee
Abstract
Significance: In some cases similar molecular programs (i.e., conserved genes and gene networks) underlie the expression of phenotypic traits that evolve repeatedly across diverse species. We investigated this possibility in the context of social behavioral response, using a comparative genomics approach for three distantly related species: house mouse ( Mus musculus ), stickleback fish ( Gasterosteus aculeatus ), and honey bee ( Apis mellifera ). An experience of territory intrusion modulated similar brain functional processes across species, including hormone-mediated signal transduction, neurodevelopment, chromosome organization, and energy metabolism. Several homologous transcription factors also responded consistently to territory intrusion, suggesting that shared neuronal effects may involve transcriptional cascades of evolutionarily conserved genes. These results indicate that conserved genetic “toolkits” are involved in independent evolutions of social behavior.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Many studies have found significant, predictable, and specific changes in brain gene expression profiles associated with behavioral responses to particular environmental stimuli (7–14).”
From Behavior-related gene regulatory networks: A new level of organization in the brain (2020) · cites this paper as [9]
In the citing paper
“Recent behavioral studies have undertaken increasingly comprehensive cross-species comparisons at the transcriptomic level and also have reported the existence of toolkits of genes and gene modules underlying parallel behaviors (9, 38), loosely analogous to developmental toolkits (16).”
From Behavior-related gene regulatory networks: A new level of organization in the brain (2020) · cites this paper as [9]
In the citing paper
“Similarly, bGRNs and associated coexpression modules provide glimpses of shared mechanisms of behavior in different species even if such evolutionary toolkits are not apparent at the individual gene level (9, 41).”
From Behavior-related gene regulatory networks: A new level of organization in the brain (2020) · cites this paper as [9]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
1 retracted
Zhang, B., Chambers, K. J., Leprince, D., Faller, D. V., & Wang, S. (2008) · Oncogene · doi:10.1038/onc.2008.419 · Cited by 20
RetractedRobinson, M. D., McCarthy, D. J., & Smyth, G. K. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btp616 · Cited by 41,364
Jenuwein, T., & Allis, C. D. (2001) · Science · doi:10.1126/science.1063127 · Cited by 9,756
REVIGO summarizes and visualizes long lists of gene ontology terms
Supek, F., Bošnjak, M., Škunca, N., & Šmuc, T. (2011) · PLoS ONE · doi:10.1371/journal.pone.0021800 · Cited by 6,264
Chen, X., Xiu, M., Xing, J., Yu, S., Min, D., & Guo, F. (2017) · Cellular Physiology and Biochemistry · doi:10.1159/000479439 · Cited by 5,762
The Wnt Signaling Pathway in Development and Disease
Logan, C. Y., & Nusse, R. (2004) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.20.010403.113126 · Cited by 5,325
The structure and function of G-protein-coupled receptors
Rosenbaum, D. M., Rasmussen, S. G. F., & Kobilka, B. K. (2009) · Nature · doi:10.1038/nature08144 · Cited by 2,534
Large-scale gene function analysis with the PANTHER classification system
Mi, H., Muruganujan, A., Casagrande, J. T., & Thomas, P. D. (2013) · Nature Protocols · doi:10.1038/nprot.2013.092 · Cited by 2,509
DNA-Binding Specificities of Human Transcription Factors
Jolma, A., Yan, J., Whitington, T., Toivonen, J., Nitta, K. R., Rastas, P. M. A., Morgunova, E. Y., Enge, M., Taipale, M., Wei, G., et al. (2013) · Cell · doi:10.1016/j.cell.2012.12.009 · Cited by 1,283
Obesity-associated variants within FTO form long-range functional connections with IRX3
Smemo, S., Tena, J. J., Kim, K.-H., Gamazon, E. R., Sakabe, N. J., Gómez-Marín, C., Aneas, I., Credidio, F. L., Sobreira, D. R., Wasserman, N. F., et al. (2014) · Nature · doi:10.1038/nature13138 · Cited by 1,219
Gene Regulatory Networks in the Evolution and Development of the Heart
Olson, E. N. (2006) · Science · doi:10.1126/science.1132292 · Cited by 1,015
Functional identification of an aggression locus in the mouse hypothalamus
Lin, D., Boyle, M. P., Dollar, P., Lee, H., Lein, E. S., Perona, P., & Anderson, D. J. (2011) · Nature · doi:10.1038/nature09736 · Cited by 914 · cited 2×
“Int J Biochem Cell Biol 44(9):1444–1447.”
MethodThe genetic causes of convergent evolution
Stern, D. L. (2013) · Nature Reviews Genetics · doi:10.1038/nrg3483 · Cited by 818
The vertebrate social behavior network: Evolutionary themes and variations
Goodson, J. L. (2005) · Hormones and Behavior · doi:10.1016/j.yhbeh.2005.02.003 · Cited by 771
Robinson, G. E., Fernald, R. D., & Clayton, D. F. (2008) · Science · doi:10.1126/science.1159277 · Cited by 597
Self-citationJASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
Portales-Casamar, É., Thongjuea, S., Kwon, A. T.-J., Arenillas, D. J., Zhao, X., Valen, E., Yusuf, D., Lenhard, B., Wasserman, W. W., & Sandelin, A. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp950 · Cited by 589
Miller, G. E., Chen, E., Sze, J., Marin, T., Arevalo, J. M. G., Doll, R., Ma, R., & Cole, S. W. (2008) · Biological Psychiatry · doi:10.1016/j.biopsych.2008.03.017 · Cited by 552
THE LOCI OF REPEATED EVOLUTION: A CATALOG OF GENETIC HOTSPOTS OF PHENOTYPIC VARIATION: PERSPECTIVE
Martin, A., & Orgogozo, V. (2013) · Evolution · doi:10.1111/evo.12081 · Cited by 497
FOXG1 Is Responsible for the Congenital Variant of Rett Syndrome
Ariani, F., Hayek, G., Rondinella, D., Artuso, R., Mencarelli, M. A., Rosseto, A. S., Pollazzon, M., Buoni, S., Spiga, O., Ricciardi, S., et al. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2008.05.015 · Cited by 437
Finding the missing honey bee genes: lessons learned from a genome upgrade
Elsik, C. G., Worley, K. C., Bennett, A. K., Beye, M., Ferreira, F. C., Childers, C. P., de Graaf, D. C., Debyser, G., Deng, J., Devreese, B. V., et al. (2014) · BMC Genomics · doi:10.1186/1471-2164-15-86 · Cited by 429
Self-citationCompartments and their boundaries in vertebrate brain development
Kiecker, C. M., & Lumsden, A. (2005) · Nature reviews. Neuroscience · doi:10.1038/nrn1702 · Cited by 424
NF-κB controls energy homeostasis and metabolic adaptation by upregulating mitochondrial respiration
Mauro, C., Leow, S. C., Ansó, E., Rocha, S., Thotakura, A. K., Tornatore, L., Moretti, M., Smaele, E. D., Beg, A. A., Tergaonkar, V., et al. (2011) · Nature Cell Biology · doi:10.1038/ncb2324 · Cited by 412
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs
Waterhouse, R. M., Tegenfeldt, F., Li, J., Zdobnov, E. M., & Kriventseva, E. V. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks1116 · Cited by 394
Chromosomal histone modification patterns – from conservation to diversity
Fuchs, J., Demidov, D., Houben, A., & Schubert, I. A. (2006) · Trends in Plant Science · doi:10.1016/j.tplants.2006.02.008 · Cited by 386
Tessmar-Raible, K., Raible, F., Christodoulou, F., Guy, K., Rembold, M., Hausen, H., & Arendt, D. (2007) · Cell · doi:10.1016/j.cell.2007.04.041 · Cited by 384
Ramírez-Amaya, V., Vazdarjanova, A., Mikhael, D., Rosi, S., Worley, P. F., & Barnes, C. A. (2005) · The Journal of Neuroscience · doi:10.1523/jneurosci.4342-04.2005 · Cited by 364
Evo-devo and the evolution of social behavior
Toth, A. L., & Robinson, G. E. (2007) · Trends in Genetics · doi:10.1016/j.tig.2007.05.001 · Cited by 338
Self-citationMedina, I., Carbonell‐Caballero, J., Pulido, L. J., Madeira, S. C., Götz, S., Conesa, A., rraga, J. ⁄. N. T. ⁄., Pascual-Montano, A., Nogales‐Cadenas, R., Santoyo‐López, J., et al. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq388 · Cited by 331
Honey bee aggression supports a link between gene regulation and behavioral evolution
Alaux, C., Sinha, S., Hasadsri, L., Hunt, G. J., Guzmán‐Novoa, E., DeGrandi‐Hoffman, G., Uribe-Rubio, J. L., Southey, B. R., Rodriguez‐Zas, S. L., & Robinson, G. E. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0907043106 · Cited by 279
Self-citationIndependent hypothalamic circuits for social and predator fear
Silva, B. A., Mattucci, C., Krzywkowski, P., Murana, E., Illarionova, A., Grinevich, V., Canteras, N. S., Ragozzino, D., & Gross, C. T. (2013) · Nature Neuroscience · doi:10.1038/nn.3573 · Cited by 260
Raskin, K., de Gendt, K., Duittoz, A., Liere, P., Verhoeven, G., Tronche, F., & Mhaouty-Kodja, S. (2009) · The Journal of Neuroscience · doi:10.1523/jneurosci.0296-09.2009 · Cited by 218
A probabilistic method to detect regulatory modules
Sinha, S., van Nimwegen, E., & Siggia, E. D. (2003) · Bioinformatics · doi:10.1093/bioinformatics/btg1040 · Cited by 207
Self-citationTFCat: the curated catalog of mouse and human transcription factors
Fulton, D. L., Sundararajan, S., Badis, G., Hughes, T. R., Wasserman, W. W., Roach, J. C., & Sladek, R. (2009) · Genome Biology · doi:10.1186/gb-2009-10-3-r29 · Cited by 189
Adult mouse brain gene expression patterns bear an embryologic imprint
Zapala, M. A., Hovatta, I., Ellison, J. A., Wodicka, L. M., Rio, J. A. D., Tennant, R., Tynan, W., Broide, R. S., Helton, R., Stoveken, B. S., et al. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0503357102 · Cited by 181
Relationship between Drosophila gap gene tailless and a vertebrate nuclear receptor Tlx
Yu, R. T., McKeown, M., Evans, R. M., & Umesono, K. (1994) · Nature · doi:10.1038/370375a0 · Cited by 179
Sartor, M. A., Leikauf, G. D., & Medvedovic, M. (2008) · Bioinformatics · doi:10.1093/bioinformatics/btn592 · Cited by 178
Chandrasekaran, S., Ament, S. A., Eddy, J. A., Rodriguez-Zas, S. L., Schatz, B. R., Price, N. D., & Robinson, G. E. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1114093108 · Cited by 176
Self-citationde Velasco, B., Erclik, T., Shy, D., Sclafani, J., Lipshitz, H. D., McInnes, R. R., & Hartenstein, V. (2006) · Developmental Biology · doi:10.1016/j.ydbio.2006.09.035 · Cited by 162
Evidence for Genetic Linkage Between a Polymorphism in the Adenosine 2A Receptor and Panic Disorder
Hamilton, S. P., Slager, S. L., Baisre, A., Heiman, G. A., Klein, D. F., Hodge, S. E., Weissman, M. M., Fyer, A. J., & Knowles, J. A. (2003) · Neuropsychopharmacology · doi:10.1038/sj.npp.1300311 · Cited by 147
The Human Synapsin II Gene Promoter
Petersohn, D., Schoch, S., Brinkmann, D. R., & Thiel, G. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.41.24361 · Cited by 144
Socially responsive effects of brain oxidative metabolism on aggression
Li‐Byarlay, H., Rittschof, C. C., Massey, J. H., Pittendrigh, B. R., & Robinson, G. E. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1412306111 · Cited by 129
Self-citationRelationships between Gene Expression and Brain Wiring in the Adult Rodent Brain
French, L., & Pavlidis, P. (2011) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1001049 · Cited by 129
Shen, L., Nam, H.-S., Song, P., Moore, H. M., & Anderson, S. A. (2006) · Hippocampus · doi:10.1002/hipo.20218 · Cited by 126
The orphan nuclear receptor Tlx regulates Pax2 and is essential for vision
Yu, R. T., Chiang, M.-Y., Tanabe, T., Kobayashi, M., Yasuda, K., Evans, R. M., & Umesono, K. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.050566897 · Cited by 124
Elevating the perspective on human stress genomics
Cole, S. W. (2010) · Psychoneuroendocrinology · doi:10.1016/j.psyneuen.2010.06.008 · Cited by 123
Sexual and social stimuli elicit rapid and contrasting genomic responses
Cummings, M. E., Larkins-Ford, J., Reilly, C. R. L., Wong, R. Y., Ramsey, M., & Hofmann, H. A. (2008) · Proceedings of the Royal Society B: Biological Sciences · doi:10.1098/rspb.2007.1454 · Cited by 118
Conservation and diversity of Foxp2 expression in muroid rodents: Functional implications
Polly Campbell, A., Reep, R. L., Stoll, M. L., Ophir, A. G., & Phelps, S. M. (2008) · The Journal of Comparative Neurology · doi:10.1002/cne.21881 · Cited by 102
Collagen XIX is expressed by interneurons and contributes to the formation of hippocampal synapses
Su, J., Gorse, K. M., Ramirez, F., & Fox, M. A. (2009) · The Journal of Comparative Neurology · doi:10.1002/cne.22228 · Cited by 101
Neville, M. C., Nojima, T., Ashley, E. A., Parker, D. J., Walker, J., Southall, T. D., de Sande, B. V., Marques, A. C., Fischer, B., Brand, A. H., et al. (2014) · Current Biology · doi:10.1016/j.cub.2013.11.035 · Cited by 100
Two Subtypes of Ecdysis-triggering Hormone Receptor inDrosophila melanogaster
Park, Y., Kim, Y., Dupriez, V., & Adams, M. E. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m301119200 · Cited by 95
Reciprocal co-regulation of EGR2 and MECP2 is disrupted in Rett syndrome and autism
Swanberg, S. E., Nagarajan, R. P., Peddada, S., Yasui, D. H., & LaSalle, J. M. (2008) · Human Molecular Genetics · doi:10.1093/hmg/ddn380 · Cited by 95
Variable neuroendocrine responses to ecologically-relevant challenges in sticklebacks
Bell, A. M., Backström, T., Huntingford, F. A., Pottinger, T. G., & Winberg, S. (2007) · Physiology & Behavior · doi:10.1016/j.physbeh.2007.01.012 · Cited by 93
Self-citationY1 receptors regulate aggressive behavior by modulating serotonin pathways
Karl, T., Lin, S., Schwarzer, C., Sainsbury, A., Couzens, M., Wittmann, W., Boey, D., von Hörsten, S., & Herzog, H. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0404085101 · Cited by 90
Yee, C. L., Wang, Y., Anderson, S. A., Ekker, M., & Rubenstein, J. L. R. (2009) · The Journal of Comparative Neurology · doi:10.1002/cne.22132 · Cited by 89
Discrete molecular states in the brain accompany changing responses to a vocal signal
Dong, S., Replogle, K. L., Hasadsri, L., Imai, B. S., Yau, P. M., Rodriguez‐Zas, S. L., Southey, B. R., Sweedler, J. V., & Clayton, D. F. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0812998106 · Cited by 80
Glycolytic genes are targets of the nuclear receptor Ad4BP/SF-1
Baba, T., Otake, H., Sato, T., Miyabayashi, K., Shishido, Y., Wang, C., Shima, Y., Kimurâ, H., Yagi, M., Ishihara, Y., et al. (2014) · Nature Communications · doi:10.1038/ncomms4634 · Cited by 78
Tbx1 regulates brain vascularization
Cioffi, S., Martucciello, S., Fulcoli, F. G., Bilio, M., Ferrentino, R., Nusco, E., & Illingworth, E. A. (2013) · Human Molecular Genetics · doi:10.1093/hmg/ddt400 · Cited by 73
Expression of the Homeobox Genes OTX2 and OTX1 in the Early Developing Human Brain
Larsen, K. B., Lutterodt, M. C., Møllgård, K., & Møller, M. (2010) · Journal of Histochemistry & Cytochemistry · doi:10.1369/jhc.2010.955757 · Cited by 72
Abellán, A., Vernier, B., Rétaux, S., & Medina, L. M. (2010) · The Journal of Comparative Neurology · doi:10.1002/cne.22410 · Cited by 69
Activity-dependent gene expression in honey bee mushroom bodies in response to orientation flight
Lutz, C. C., & Robinson, G. E. (2013) · Journal of Experimental Biology · doi:10.1242/jeb.084905 · Cited by 68
Self-citationDevelopmental Expression of Wnt Signaling Factors in Mouse Brain
Coyle-Rink, J., Valle, L. D., Sweet, T., Khalili, K., & Amini, S. (2002) · Cancer Biology & Therapy · doi:10.4161/cbt.313 · Cited by 67
Transcriptional regulation of brain gene expression in response to a territorial intrusion
Sanogo, Y. O., Band, M., Blatti, C. A., Sinha, S., & Bell, A. M. (2012) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2012.2087 · Cited by 67
Self-citationDirect action of gonadotropin in brain integrates behavioral and reproductive functions
Yang, E.-J., Nasipak, B. T., & Kelley, D. B. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0608391104 · Cited by 66
The importance of genomic novelty in social evolution
Sumner, S. (2013) · Molecular Ecology · doi:10.1111/mec.12580 · Cited by 63
Lahr, E. C., Dean, D. M., & Ewer, J. (2012) · Journal of Neuroscience · doi:10.1523/jneurosci.5301-11.2012 · Cited by 63
Davis, S. M., Thomas‐Wilson, A., Nomie, K. J., Huang, L., & Dierick, H. A. (2014) · Nature Communications · doi:10.1038/ncomms4177 · Cited by 61
Ament, S. A., Blatti, C. A., Alaux, C., Wheeler, M. M., Toth, A. L., Conte, Y. L., Hunt, G. J., Guzmán‐Novoa, E., DeGrandi‐Hoffman, G., Uribe-Rubio, J. L., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1205283109 · Cited by 61
Self-citationA novel method for cross-species gene expression analysis
Kristiansson, E., Österlund, T., Gunnarsson, L. M., Arne, G., Larsson, D. G. J., & Nerman, O. (2013) · BMC Bioinformatics · doi:10.1186/1471-2105-14-70 · Cited by 48
Ellis, L. L., & Carney, G. E. (2010) · Genetics · doi:10.1534/genetics.110.122754 · Cited by 44
The Genomics of Memory and Learning in Songbirds
Clayton, D. F. (2013) · Annual Review of Genomics and Human Genetics · doi:10.1146/annurev-genom-090711-163809 · Cited by 44
Philippi, A., Torès, F., Carayol, J., Rousseau, F., Letexier, M., Roschmann, E., Lindenbaum, P., Benajou, A., Fontaine, K., Vazart, C., et al. (2007) · BMC Medical Genetics · doi:10.1186/1471-2350-8-74 · Cited by 43
MKLs: Co-factors of serum response factor (SRF) in neuronal responses
Kalita, K. B., Kuźniewska, B., & Kaczmarek, L. (2012) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2012.05.008 · Cited by 43
New Frontiers for Organismal Biology
Kültz, D., Clayton, D. F., Robinson, G. E., Albertson, R. C., Carey, H. V., Cummings, M. E., Dewar, K., Edwards, S. V., Hofmann, H. A., Gross, L. J., et al. (2013) · BioScience · doi:10.1525/bio.2013.63.6.8 · Cited by 39
Self-citationReduced anxiety- and depression-like behaviors in Emx1 homozygous mutant mice
Cao, B., & Li, Y. (2002) · Brain Research · doi:10.1016/s0006-8993(02)02461-7 · Cited by 34
Steroidogenic Factor 1 and the Central Nervous System
Büdefeld, T., Tobet, S. A., & Majdič, G. (2011) · Journal of Neuroendocrinology · doi:10.1111/j.1365-2826.2011.02174.x · Cited by 28
Nonogaki, K., Kaji, T., Ohba, Y., Sumii, M., Wakameda, M., & Tamari, T. (2009) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2009.06.023 · Cited by 22
MADAM - An open source meta-analysis toolbox for R and Bioconductor
Kugler, K., Mueller, L. A. J., & Graber, A. (2010) · Source Code for Biology and Medicine · doi:10.1186/1751-0473-5-3 · Cited by 22
Ramos, C., Martínez, A., Robert, B., & Soriano, E. (2004) · Neuroscience · doi:10.1016/j.neuroscience.2004.06.010 · Cited by 18
Altered response to antidepressant treatment in FoxG1 heterozygous knockout mice
Kinsler, R., Taylor, M. M., Flores, N. M., Leffert, J. J., & Beech, R. D. (2009) · Synapse · doi:10.1002/syn.20737 · Cited by 6
Shaping animal body plans in development and evolution by modulation of Hox expression patterns
(1998) · doi:10.1002/(sici)1521-1878(199802)20:2
Research works printed but not linked: 1
- 10.1002/(SICI)1521-1878(199802)20:2<116::AID-BIES4>3.0.CO;2-R · DOI
Cited by
Social determinants of health and survival in humans and other animals
Snyder-Mackler, N., Burger, J. R., Gaydosh, L., Belsky, D. W., Noppert, G. A., Campos, F. A., Bartolomucci, A., Yang, Y. C., Aiello, A. E., O’Rand, A., et al. (2020) · Science · doi:10.1126/science.aax9553 · Cited by 679
Conserved transcriptomic profiles underpin monogamy across vertebrates
Young, R. L., Ferkin, M. H., Ockendon-Powell, N. F., Orr, V. N., Phelps, S. M., Pogány, Á., Richards-Zawacki, C. L., Summers, K., Székely, T., Trainor, B. C., et al. (2019) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1813775116 · Cited by 93
Parey, E., Louis, A., Montfort, J., Guiguen, Y., Crollius, H. R., & Berthelot, C. (2022) · Genome Research · doi:10.1101/gr.276953.122 · Cited by 83
Behavior-related gene regulatory networks: A new level of organization in the brain
Sinha, S., Jones, B. M., Traniello, I. M., Bukhari, S. A., Halfon, M. S., Hofmann, H. A., Huang, S., Katz, P. S., Keagy, J., Lynch, V. J., et al. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1921625117 · Cited by 85
Self-citationSaul, M. C., Seward, C. H., Troy, J. M., Zhang, H., Sloofman, L. G., Lu, X., Weisner, P. A., Caetano-Anolles, D., Sun, H., Zhao, S. D., et al. (2017) · Genome Research · doi:10.1101/gr.214221.116 · Cited by 46
Self-citation
Metadata
- Authors
- Rittschof, C. C., Bukhari, S. A., Sloofman, L. G., Troy, J. M., Caetano-Anollés, D., Cash-Ahmed, A., Kent, M., Lu, X., Sanogo, Y. O., Weisner, P. A., Zhang, H., Bell, A. M., Ma, J., Sinha, S., Robinson, G. E., & Stubbs, L.
- Affiliations
- Institute for Genomic Biology,
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2014-12
- Volume
- 111
- Issue
- 50
- Pages
- 17929-17934
- ISSN
- 0027-8424
- 1091-6490
- Cited by
- 163
- References
- 80
- Language
- en
- Funders
- Simons Foundation (SF) (291812)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.