Cited by 62Mass Spectrometry Techniques and ApplicationsAdvanced Proteomics Techniques and ApplicationsEnzyme Catalysis and Immobilization

Mass spectrometry and immobilized enzymes for the screening of inhibitor libraries

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Cancilla, Mark T., Leavell, Michael D., Chow, Jason, Leary, Julie A.·2000·Proceedings of the National Academy of Sciences

Abstract

A technique has been developed to rapidly screen enzyme inhibitor candidates from complex mixtures, such as those created by combinatorial synthesis. Inhibitor libraries are screened by using immobilized enzyme technologies and electrospray ionization ion cyclotron resonance mass spectrometry. The library mixture is first sprayed into the mass spectrometer, and compounds are identified. The library is subsequently incubated with the immobilized enzyme of interest under the correct conditions (buffer, pH, temperature) by using an excess of enzyme to ensure a surplus of sites for ligand binding. The immobilized enzyme/inhibitor mixture is centrifuged, and an aliquot of supernatant is again analyzed by electrospray ionization mass spectrometry. Potential inhibitors are quickly identified by comparison of the spectra before and after incubation with the immobilized enzyme. Non-inhibitors show no change in ion intensity after incubation, whereas weak inhibitors exhibit a visible decrease in ion abundance. Once inhibitor candidates have been identified, the library is reinjected into the mass spectrometer, and tandem mass spectrometry is used to determine the structure of the inhibitor candidates as needed. This method has been successfully demonstrated by identifying inhibitors of the enzymes pepsin and glutathione S -transferase from a 19- and 17-component library, respectively. It is further shown that the immobilized enzyme can be recycled and reused for continuous screening of additional new libraries without adding additional enzyme.

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  • This limitation can be overcome by using a molar excess of protein compared with the total molar concentration of the ligand library.

    “However, this limitation can be overcome by using a molar excess of protein compared with the total molar concentration of the ligand library15.”

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  1. [3]Gordon E M, Gallop M A, Patel D V. Acc Chem Res. 1996;29:144–154. [Google Scholar]
  2. [7]Siuzdak G, Lewis J K. Biotech Bioeng. 1998;61:127–134. [PubMed] [Google Scholar]
  3. [9]Dunayevskiy Y M, Lai J-J, Quinn C, Talley F, Vouros P. Rapid Commun Mass Spectrom. 1997;11:1178–1184. [Google Scholar]
  4. [11]Davis R G, Anderegg R J, Blanchard S G. Tetrahedron. 1999;55:11653–11667. [Google Scholar]
  5. [21]Chu Y-H, Dunayevskiy Y M, Kirby D P, Vouros P, Karger B L. J Am Chem Soc. 1996;118:7827–7835. [Google Scholar]
  6. [25]Lowry O H, Rosebrough N J, Farr L, Randall R J. J Biol Chem. 1951;193:265–275. [PubMed] [Google Scholar]

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Authors
Cancilla, M. T., Leavell, M. D., Chow, J., & Leary, J. A.
Affiliations
University of California, Berkeley (US)
Venue
Proceedings of the National Academy of Sciences
Published
2000-10-17
Volume
97
Issue
22
Pages
12008-12013
ISSN
  • 0027-8424 (ISSN-L)
  • 1091-6490
OpenAlex
W1993934748
Cited by
61
References
33
Citations by year
2023: 1 · 2022: 2 · 2020: 1 · 2017: 3 · 2016: 4 · 2015: 1 · 2013: 1 · 2012: 3
FWCI
3.51
Type
journal article
Language
en
Open access
Locations
  • Proceedings of the National Academy of Sciences (publishedVersion)
  • Europe PMC (PubMed Central) (publishedVersion)
  • PubMed Central (publishedVersion)
  • PubMed (publishedVersion)
Topics
  • Physical Sciences › Chemistry › Spectroscopy › Mass Spectrometry Techniques and Applications
  • Physical Sciences › Chemistry › Spectroscopy › Advanced Proteomics Techniques and Applications
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Enzyme Catalysis and Immobilization
Keywords
enzyme inhibitor screening, immobilized enzymes, tandem mass spectrometry, pepsin inhibitor, glutathione S-transferase inhibitors, enzyme recycling, ligand binding
MeSH terms
Animals, Enzyme Inhibitors, Enzymes, Immobilized, Glutathione Transferase, Pepsin A, Substrate Specificity, Swine, Spectrometry, Mass, Electrospray Ionization

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