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The new animal phylogeny: Reliability and implications
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DNA sequence analysis dictates new interpretation of phylogenic trees. Taxa that were once thought to represent successive grades of complexity at the base of the metazoan tree are being displaced to much higher positions inside the tree. This leaves no evolutionary "intermediates" and forces us to rethink the genesis of bilaterian complexity.
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“Thus the parental anemones whose genomes we sampled have somewhat less allelic variation than broadcast spawning invertebrates such as sea squirts (~2%) (7) and sea urchins (5-10%) (8), or outbreeding plants like Populus (~2%) (34), but a comparable amount to the pufferfish (0.5%) (35).”
From Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization (2007) · cites this paper as [34]
In the citing paper
“The Bilateria thus derive from a common ancestor, a point repeatedly substantiated in current molecular phylogenies (reviewed in Adoutte et al., 2000;Peterson and Eernisse, 2001).”
From Precambrian Animal Life: Probable Developmental and Adult Cnidarian Forms from Southwest China (2002) · cites this paper as Adoutte et al., 2000
In the citing paper
“Cladistic analyses, both morphological and molecular, clearly indicate that the bilaterians are monophyletic, i.e., they derive from a latest common ancestor that gave rise only to bilaterians (see ref. 8).”
From Precambrian animal diversity: Putative phosphatized embryos from the Doushantuo Formation of China (2000) · cites this paper as [8]
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Hox genes from the Polystomatidae (Platyhelminthes, Monogenea)
Badets, M., & Verneau, O. (2009) · International Journal for Parasitology · doi:10.1016/j.ijpara.2009.05.008 · Cited by 6
“Within the Lophotrochozoa, an archetype of 10 Hox genes was assumed for all members of the clade, composed of two anterior genes (lab/hox1 and pb/hox2), seven central genes (bcd/hox3, dfd/hox4, scr/ hox5, ftz, antp, ubx/lox2 and abd-A/lox4) and one class of posterior genes (abd-B/post-1 and post-2) (de Rosa et al., 19…”
BackgroundCurrent Approaches to Phylogenomic Reconstruction
Baurain, D., & Philippe, H. (2010) · Wiley eBooks · doi:10.1002/9780470570418.ch2 · Cited by 5
Raineri, M. (2006) · Biological Journal of the Linnean Society · doi:10.1111/j.1095-8312.2006.00574.x · Cited by 6
Origins of the Chordate Central Nervous System: Insights from Hemichordates
Lowe, C. J. (2007) · Evolution of Nervous Systems · doi:10.1016/b0-12-370878-8/00126-9 · Cited by 6
Metabolomic and physiological insights to ameliorate post-harvest stress in cultured mussels
Cheng, M. C. F., Welford, M., Zamora, L. N., Delorme, N. J., Ragg, N. L. C., Hickey, A. J., & Dunphy, B. J. (2025) · Metabolomics · doi:10.1007/s11306-025-02289-1 · Cited by 5
“…post-harvest groups mapping to the metabolic pathways of Schistosoma mansoni (flatworm), which has a closer phylogenetic relationship to molluscs (Adoutte et al., 2000), in the Kyoto Encyclope-dia of Genes and Genomes (KEGG) database (Kanehisa & Goto, 2000), using all annotated molecules…”
Evolution of Mitochondrial Power in Vertebrate Metazoans
Kitazoe, Y., & Tanaka, M. (2014) · PLoS ONE · doi:10.1371/journal.pone.0098188 · Cited by 5
“The splitting pattern of Figure 3 became compatible with a molecular (rRNA)-based phylogeny [21], in the point that the tree starts with the root of Porifera and splits into the two lineages of Deuterostomia and Protostomia via Cnidaria.”
BackgroundZoology: Worming into the Origin of Bilaterians
Marlétaz, F. (2019) · Current Biology · doi:10.1016/j.cub.2019.05.006 · Cited by 5
Regulatory Co-options in the Evolution of Deuterostome Immune Systems
Rothenberg, E. V., & Davidson, E. H. (2003) · Humana Press eBooks · doi:10.1007/978-1-59259-320-0_4 · Cited by 5
Genomic Analyses and the Origin of the Eukaryotes
Rivera, M. C. (2007) · Chemistry & Biodiversity · doi:10.1002/cbdv.200790215 · Cited by 5
Dendritic Arbors: A Tale of Living Tiles
Ghysen, A. (2003) · Current Biology · doi:10.1016/s0960-9822(03)00361-0 · Cited by 5
“Leeches belong to the lophotrochozoa, the sister phylum of the ecdysozoa, implying that the same mechanism is used in two of the three major extent phyla [9].”
BackgroundA history of Evo-Devo research in Spain
Baguñ, J. (2009) · The International Journal of Developmental Biology · doi:10.1387/ijdb.072427jb · Cited by 5
The unique biomineralization transcriptome and proteome of Lytechinus variegatus teeth
Alvares, K., DeHart, C. J., Thomas, P. M., Kelleher, N. L., & Veis, A. (2018) · Connective Tissue Research · doi:10.1080/03008207.2017.1408605 · Cited by 4
“mineralized tissues, the echinoderms (22), and we began with the heavily mineralized calcitic echinoderm teeth, which had been studied extensively in terms of structure”
BackgroundThe coelom and the origin of the annelid body plan
Rieger, R. M., & Purschke, G. (2005) · Springer eBooks · doi:10.1007/1-4020-3240-4_8 · Cited by 4
Omond, S. E. T., & Lesku, J. A. (2023) · Journal of Comparative Physiology B · doi:10.1007/s00360-023-01480-x · Cited by 4
“Trees were adapted from Adoutte et al. (2000) diffusion of gasses across a selectively permeable body wall, supplanting the need for a coelom, and respiratory and circulatory systems.”
BackgroundMethodInfluentialMolecular Systematics and the Evolution of Arthropods
Hoy, M. A. (2013) · Elsevier eBooks · doi:10.1016/b978-0-12-415874-0.00012-3 · Cited by 4
Coelom Metamerism in Echinodermata
Ezhova, O. V., & Malakhov, V. V. (2021) · Paleontological Journal · doi:10.1134/s0031030121100038 · Cited by 5
“Keywords: metamerism, dissymmetry, coelomic system, phylogeny, evolution, Echinodermata, Deuterostomia DOI: 10.1134/S0031030121100038”
BackgroundInfluentialAuletta, G., Adell, T., Colagè, I., D’Ambrosio, P., & Saló, E. (2012) · Microgravity Science and Technology · doi:10.1007/s12217-012-9317-6 · Cited by 4
Robust prey detection in a small nervous system
Nordström, K. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1219973110 · Cited by 4
“Intriguingly, however, despite vertebrates and insects being separated by huge evolutionary distances (6), and being equipped with completely different eyes (7), motion vision is coded in remarkably similar ways in the vertebrate visual cortex and the insect brain (8).”
BackgroundA Genome Wide Screening Approach for Membrane-targeted Proteins
Jaaro, H., Levy, Z., & Fainzilber, M. (2005) · Molecular & Cellular Proteomics · doi:10.1074/mcp.t400020-mcp200 · Cited by 4
“elegans and Drosophila? Although classical morphology-based phylogeny tagged molluscs and arthropods as coelomates and nematodes as pseudocoelomates, certain molecular phylogenies place arthropods and nematodes on the same branch of the evolutionary tree (26, 27).”
Background
Metadata
- Authors
- Adoutte, A., Balavoine, G., Lartillot, N., Lespinet, O., Prud'homme, B., & de Rosa, R.
- Affiliations
- Centre National de la Recherche Scientifique (FR)
- Centre de Génétique Moléculaire, Centre National de la Recherche Scientifique, Bâtiment 26, 91198 Gif-sur-Yvette Cedex, France
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2000-04-25
- Volume
- 97
- Issue
- 9
- Pages
- 4453-4456
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC34321
- OpenAlex
- W2162160001
- Cited by
- 512
- References
- 48
- Citations by year
- 2026: 5 · 2025: 4 · 2024: 6 · 2023: 3 · 2022: 9 · 2021: 4 · 2020: 2 · 2019: 11 · 2018: 4 · 2017: 6 · 2016: 10 · 2015: 11 · 2014: 15 · 2013: 12 · 2012: 19
- FWCI
- 7.08
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- Topics
- Life Sciences › Agricultural and Biological Sciences › Animal Science and Zoology › Marine Invertebrate Physiology and Ecology
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Protist diversity and phylogeny
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Keywords
- animal phylogeny, DNA sequence analysis, evolutionary intermediates, taxonomic reclassification
- MeSH terms
- Animals, DNA, Biological Evolution, Genes, Homeobox, Invertebrates, Molecular Biology, Phylogeny, Vertebrates, Reproducibility of Results, Evolution, Molecular
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