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Exon Recognition in Vertebrate Splicing
Open accessAbstract
The average vertebrate gene consists of multiple small exons (average size, 137 nucleotides) separated by introns that are considerably larger(1). Thus, the vertebrate splicing machinery has the task of finding small desired exons amid much longer introns. The splice site consensus sequences that drive exon recognition are located at the very termini of introns(2, 3). Despite the discriminatory challenge faced during exon recognition in large multiexon premessenger RNAs, vertebrate splice sites are short and poorly conserved.
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Cited by
Predicting splicing from primary sequence with deep learning
Jaganathan, K., Kyriazopoulou Panagiotopoulou, S., McRae, J. F., Darbandi, S. F., Knowles, D., Li, Y. I., Kosmicki, J. A., Arbelaez, J., Cui, W., Schwartz, G. B., et al. (2019) · Cell · doi:10.1016/j.cell.2018.12.015 · Cited by 2,853
Mechanisms of Alternative Pre-Messenger RNA Splicing
Black, D. L. (2003) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.72.121801.161720 · Cited by 2,704
The Spliceosome: Design Principles of a Dynamic RNP Machine
Wahl, M. C., Will, C. L., & Lührmann, R. (2009) · Cell · doi:10.1016/j.cell.2009.02.009 · Cited by 2,665
Spliceosome Structure and Function
Will, C. L., & Luhrmann, R. (2011) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a003707 · Cited by 1,829
Function of alternative splicing
Stamm, S., Ben-Ari, S., Rafalska, I., Tang, Y., Zhang, Z., Toiber, D., Thanaraj, T. A., & Soreq, H. (2005) · Gene · doi:10.1016/j.gene.2004.10.022 · Cited by 1,377
Metadata
- Authors
- Berget, S. M.
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 1995-02
- Volume
- 270
- Issue
- 6
- Pages
- 2411-2414
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W2027699344
- Cited by
- 1,086
- References
- 0
- FWCI
- 15.87
- Type
- journal article
- Language
- en
- Open access
- hybrid
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- Berget, S. M. (1995). Exon Recognition in Vertebrate Splicing. Journal of Biological Chemistry. https://doi.org/10.1074/jbc.270.6.2411
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