The DOI matches its Crossref record; 52 of the 52 references it cites were found in a registry or an index.
miR-125a-5p Regulates Differential Activation of Macrophages and Inflammation
Open accessAbstract
Macrophage activation is a central event in immune responses. Macrophages undergoing classical activation (M1 macrophages) are proinflammatory, whereas alternatively activated macrophages (M2 macrophages) are generally anti-inflammatory. miRNAs play important regulatory roles in inflammatory response. However, the manner in which miRNAs regulate macrophage activation in response to different environmental cues has not been well defined. In this study, we found that M-BMM macrophages (M2) express greater levels of miR-125a-5p than do GM-BMM macrophages (M1). Stimulation of macrophages through TLR2 and TLR4 but not through TLR3 enhanced miR-125a-5p expression. Up-regulation of miR-125a-5p after TLR2/4 activation requires the adaptor MYD88 but not TRIF. Overexpression of miR-125a-5p diminished M1 phenotype expression induced by LPS but promoted M2 marker expression induced by IL-4. In contrast, knockdown of miR-125a-5p promoted M1 polarization and diminished IL-4-induced M2 marker expression. We found that miR-125a-5p targets KLF13, a transcriptional factor that has an important role in T lymphocyte activation and inflammation. KLF13 knockdown had similar effects on M1 activation as did miR-125a-5p overexpression. In addition, miR-125a-5p regulates phagocytic and bactericidal activities of macrophages. Our data suggest that miR-125a-5p has an important role in suppressing classical activation of macrophages while promoting alternative activation.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“M1 macrophages, when transfected with miR-125a-5p, are less potent in exerting bactericidal activity against Escherichia coli, which results from targeting Kruppel-like Factor 13 (KLF13) and promotion of M2 polarization [138].”
From MicroRNAs as Regulators of Phagocytosis (2022) · cites this paper as [138]
Experimental — accuracy not yet measuredThe source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“Stimulation of TLR2 and TLR4 leads to upregulation of miR-125a-5p in an MYD88-dependent manner and subsequently promotes the M2 phenotype [138]”
From MicroRNAs as Regulators of Phagocytosis (2022) · cites this paper as [138]
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Exploring the full spectrum of macrophage activation
Mosser, D. M., & Edwards, J. P. (2008) · Nature Reviews Immunology · doi:10.1038/nri2448 · Cited by 9,144
Akira, S., & Takeda, K. (2004) · Nature reviews. Immunology · doi:10.1038/nri1391 · Cited by 8,312
Monocyte and macrophage heterogeneity
Gordon, S., & Taylor, P. R. (2005) · Nature Reviews Immunology · doi:10.1038/nri1733 · Cited by 5,190
Development of Monocytes, Macrophages, and Dendritic Cells
Geissmann, F., Manz, M. G., Jung, S., Sieweke, M. H., Merad, M., & Ley, K. (2010) · Science · doi:10.1126/science.1178331 · Cited by 3,049
Martínez, F. O., Gordon, S., Locati, M., & Mantovani, A. (2006) · The Journal of Immunology · doi:10.4049/jimmunol.177.10.7303 · Cited by 2,399
Transcriptional regulation of macrophage polarization: enabling diversity with identity
Lawrence, T., & Natoli, G. (2011) · Nature Reviews Immunology · doi:10.1038/nri3088 · Cited by 2,284
Small non-coding RNAs in animal development
Stefani, G., & Slack, F. J. (2008) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2347 · Cited by 1,390
IRF5 promotes inflammatory macrophage polarization and TH1-TH17 responses
Krausgruber, T., Blazek, K. D., Smallie, T., Alzabin, S., Lockstone, H. E., Sahgal, N., Hussell, T., Feldmann, M., & Udalova, I. A. (2011) · Nature Immunology · doi:10.1038/ni.1990 · Cited by 1,342
Tili, E., Michaille, J.-J., Cimino, A., Costinean, S., Dumitru, C. D., Adair, B., Fabbri, M., Alder, H., Liu, C. G., Calin, G. A., et al. (2007) · The Journal of Immunology · doi:10.4049/jimmunol.179.8.5082 · Cited by 1,304
Toll-Like Receptor Signaling Pathways
Barton, G. M., & Medzhitov, R. M. (2003) · Science · doi:10.1126/science.1085536 · Cited by 1,270
Flagged first, then by citations
Cited by
Sorted by citations
Items 201–260 of 260
Xu, X., Liu, R., Zhou, X., Zhang, Z., Zhu, T., Huang, Y., Chai, L., Wang, Y., Zhao, Z., Li, W., et al. (2022) · Frontiers in Immunology · doi:10.3389/fimmu.2022.1033471 · Cited by 4
MicroRNAs as promising therapeutic agents: A perspective from acupuncture
Li, S., Huang, Q., Yang, Q., Peng, X., & Wu, Q. (2023) · Pathology - Research and Practice · doi:10.1016/j.prp.2023.154652 · Cited by 4
How Noncoding RNAs Contribute to Macrophage Polarization
Cui, H., & Liu, G. (2014) · Springer eBooks · doi:10.1007/978-3-319-13689-9_4 · Cited by 4
Self-citationMahib, M. M. R. (2026) · Clinical and Translational Medicine · doi:10.1002/ctm2.70646 · Cited by 4
Mao, J., Yang, Y., Xiong, Y., Wang, X., Wu, Q., Lin, W., Li, X., & Li, Y. (2026) · Diabetes/Metabolism Research and Reviews · doi:10.1002/dmrr.70175 · Cited by 3
MicroRNA -21 expression as an auxiliary diagnostic biomarker of acute brucellosis
Rezaeepoor, M., Keramat, F., Jourghasemi, S., Rahmanpour, M., Lipsa, A., Hajilooi, M., & Solgi, G. (2024) · Molecular Biology Reports · doi:10.1007/s11033-023-09193-8 · Cited by 3
Wang, A., Fairhurst, A., Liu, K., Wakeland, B., Barnes, S. D., Malladi, V. S., Viswanathan, K., Arana, C., Dozmorov, I. M., Singhar, A., et al. (2024) · Communications Biology · doi:10.1038/s42003-024-07099-0 · Cited by 3
KLF15 regulates macrophage polarization patterns in deep vein thrombosis
Li, J., Xiang, Y., Shentu, H., Yang, X., Yang, J. Y., Ge, W., & Song, E. (2025) · International Immunopharmacology · doi:10.1016/j.intimp.2025.114632 · Cited by 3
Xiong, W., Yao, W., Gao, Z., & Liu, K. (2022) · Scientific Reports · doi:10.1038/s41598-021-04330-4 · Cited by 3
Wang, Z., Qin, M., Li, Y., Li, Y., Qi, Z., Li, X., Gao, J., Luoreng, Z., & Wang, X. (2026) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.6c00186 · Cited by 2
Vázquez, G. (2015) · Biochemistry and Biophysics Reports · doi:10.1016/j.bbrep.2015.08.009 · Cited by 2
Feng, Y., Wong, K. C.-Y., Tsui, W.-K., Zhang, R., Xiang, Y., & So, H. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26136441 · Cited by 1
miRNAs and their Role in the Pathogenesis of Celiac Disease: A Review
Barisani, D. (2018) · Springer eBooks · doi:10.1007/978-3-319-31143-2_124-1 · Cited by 2
MicroRNAs as Potential Diagnostic, Prognostic, and Therapeutic Biomarkers in Ischemic Stroke
Rajanikant, G. K., Gressèns, P., Nampoothiri, S. S., Surendran, G., & Bokobza, C. (2020) · Springer eBooks · doi:10.1007/978-981-15-4798-0_7 · Cited by 2
Non-coding RNAs Related to Atherosclerosis
Holvoet, P. (2021) · Springer eBooks · doi:10.1007/978-3-030-68844-8_5 · Cited by 2
Clément, A., Lamarche, D., Masse, M.-H., Légaré, C., Tai, L., Fleury-Deland, L., Battista, M., Bouchard, L., & D’Aragon, F. (2022) · Epigenetics · doi:10.1080/15592294.2022.2076048 · Cited by 1
Jiang, M., Zhang, Y., Liu, T., Hong, X., Kho, A. T., Li, J., Gao, Y., Sharma, R., Celedon, J. C., McGeachie, M. J., et al. (2025) · Thorax · doi:10.1136/thorax-2024-222618 · Cited by 1
Zhang, B., Liu, J., Liu, L., Wu, J., Mo, X., Tang, R., & Liu, Z. (2026) · Bioactive Materials · doi:10.1016/j.bioactmat.2026.03.004 · Cited by 1
Izuo, N., Kondoh, H., & Shimizu, T. (2026) · Geriatrics and gerontology international/Geriatrics & gerontology international · doi:10.1111/ggi.70483 · Cited by 1
Tumor- and Immune Cell-Derived Exosomes
Seo, N., & Shiku, H. (2014) · Drug Delivery System · doi:10.2745/dds.29.152 · Cited by 1
Zhang, W., Li, Y., Ke, H.-Q., Wang, Y., Duan, C., Zhu, Q., & Liu, H. (2021) · Archives of Medical Science · doi:10.5114/aoms/135595 · Cited by 1
Shi, M., Chu, F., Lang, Y., Zheng, C., Jin, T., Cui, L., & Zhu, J. (2020) · doi:10.22541/au.159985946.68103920
Can miRNA profiling be helpful in distinguishing rheumatic disorders?Preprint
Chaszczewska-Markowska, M., Gębura, K., Świerkot, J., Sokolik, R., Bugaj, B., Wielińska, J., & Bogunia‐Kubik, K. (2022) · Research Square · doi:10.21203/rs.3.rs-1693579/v1 · Cited by 1
Role of microRNA-21 in atherogenesis.
Hamed-Berair, R. E. (2016) · ThinkIR: The University of Louisville's Institutional Repository (University of Louisville) · doi:10.18297/etd/2431
Polarization of Macrophage and Lupus Nephritis
Hu, Q., & Wang, Q. (2016) · Journal of Dermatitis · doi:10.35248/2684-1436.16.1.103
Using microRNAs to Promote Inflammation Resolution in Cardiovascular Research
Bráz, J. P. H. (2016) · Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT) · doi:10.34626/9tq4-5g41
Neuroimmunotoxicology of the heavy metal toxicant lead
Kasten‐Jolly, J., & Lawrence, D. A. (2018) · Advances in neurotoxicology · doi:10.1016/bs.ant.2018.10.004
A new perspective on acute-on-chronic liver failure: Liver fibrosis and injury resistance
Bai, L., Chen, Y., Duan, Z., & Zheng, S.-J. (2019) · World Chinese Journal of Digestology · doi:10.11569/wcjd.v27.i3.139
Kanda, P. (2019) · uO Research (University of Ottawa) · doi:10.20381/ruor-23237
Análisis del perfil de expresión de microARN en pacientes con candidemia
Ragozzino, S. (2018) · Gredos (University of Salamanca) · doi:10.14201/gredos.139739
41 新理論物理による大統一理論「素粒子は時から創られた」 : その視点と論証法
四方, 勝. (2004) · Viva origino
miRNAs and Their Role in the Pathogenesis of Celiac Disease: A Review
Barisani, D. (2019) · Springer eBooks · doi:10.1007/978-3-319-55530-0_124
Shen, D., Chu, F., Lang, Y., Zheng, C., Li, C., Zheng, X., & Zhu, J. (2021) · doi:10.22541/au.161961436.61203158/v1
Research Progress on the Relationship between miR-125a-5p and Pulmonary Tuberculosis
刘, 荣. (2023) · Advances in Clinical Medicine · doi:10.12677/acm.2023.1351034
Kijpaisalratana, N., Charnnarong, N., Payungporn, S., & Pisitkun, T. (2019) · Chula Digiverse · doi:10.58837/chula.the.2019.371
Zhou, H., Yang, L., Wang, Y., Zhang, Q., Zhang, Z., Wang, Y., Pan, Z., Cao, J., Li, D., Liu, C., et al. (2023) · Research Square · doi:10.21203/rs.3.rs-3754257/v1
RNA interference-based therapies for atherosclerosis: Recent advances and future prospects
Parsamanesh, N., Poudineh, M., Siami, H., Butler, A. E., Almahmeed, W. A., & Sahebkar, A. (2023) · Progress in molecular biology and translational science · doi:10.1016/bs.pmbts.2023.12.009 · Cited by 1
MicroRNA modulation in metabolic syndrome: A novel insight into cardiometabolic diseases
Kumar, S., Li, L., & Gupta, S. (2024) · Elsevier eBooks · doi:10.1016/b978-0-323-85732-1.00010-4
Samsudin, A. R., Selvakumar, B., & Sekar, P. (2024) · doi:10.22541/au.170664102.28484992/v1
Inflammation Resolution Mediators: Future Prospects
Müller, R. L. J., Hoch, M., & Gupta, S. K. (2024) · Springer eBooks · doi:10.1007/978-981-97-0157-5_9
Mishra, S. C., & Puzhankara, L. (2024) · MicroRNA · doi:10.2174/0122115366305491240708060422
Wawrzyniak, O., Wawrzyniak, D., Smuszkiewicz, M., Głodowicz, P., Gotz‐Więckowska, A., & Rolle, K. (2024) · Journal of Applied Genetics · doi:10.1007/s13353-024-00922-8
Zhu, X., He, L., Li, X., Pei, W., Yang, H., Zhong, M., Zhang, M., Lv, K., & Zhang, Y. (2023) · Figshare · doi:10.6084/m9.figshare.22615390
Zhu, X., He, L., Li, X., Pei, W., Yang, H., Zhong, M., Zhang, M., Lv, K., & Zhang, Y. (2023) · Figshare · doi:10.6084/m9.figshare.22615393
Mosharaf, M. P., Alam, K., Gow, J., & Mahumud, R. A. (2024) · Figshare · doi:10.6084/m9.figshare.26643940
Mosharaf, M. P., Alam, K., Gow, J., & Mahumud, R. A. (2024) · Figshare · doi:10.6084/m9.figshare.26643934
Mosharaf, M. P., Alam, K., Gow, J., & Mahumud, R. A. (2024) · Figshare · doi:10.6084/m9.figshare.26643937
Zhu, X., He, L., Li, X., Pei, W., Yang, H., Zhong, M., Zhang, M., Lv, K., & Zhang, Y. (2023) · Figshare · doi:10.6084/m9.figshare.22615396
Zhu, X., He, L., Li, X., Pei, W., Yang, H., Zhong, M., Zhang, M., Lv, K., & Zhang, Y. (2023) · Figshare · doi:10.6084/m9.figshare.22615399
Endometriosis Diagnostic: Molecular Biomarkers, 3D Imaging and Beyond
Fazel, A. (2026) · Journal of Minimally Invasive Gynecology · doi:10.1016/j.jmig.2026.03.019
Le rôle des cellules myéloïdes et microARNs dans l'arthrite juvénile
Nziza, N. (2019) · theses.fr (ABES) · doi:10.70675/ec5ceec9zd337z4668za5cez1af5546bbbad
Metabolism, inflammation, and mechanosensing during cardiac regeneration
Abaroa, J. M. (2025) · theses.fr (ABES) · doi:10.70675/a84ea862z9e21z4e2bza200za2d6a5f166b9
Pan, T., Wang, X., Wang, Y., Zhao, D., Li, H., Li, H., Li, S., Guo, T., Wang, N., Huang, H., et al. (2026) · International Immunopharmacology · doi:10.1016/j.intimp.2026.116847
Development and validation of a serum microRNA biomarker panel for bovine Johne's disease
Rodrigues, C. H. M., Su, J., Singanallur, N. B., Rootes, C. L., Wilson, A., Islam, M. Z., Hodgeman, R., Alexander, M. R., Farr, R. J., & Stewart, C. R. (2026) · Journal of Dairy Science · doi:10.3168/jds.2026-28619
Nasser, M., Sabry, R., & Favetta, L. A. (2026) · Journal of Developmental Biology · doi:10.3390/jdb14020028
Feng, Y., Yang, L., Liu, Y., Pei, J., Su, K., Li, C., Jiang, H., Zhang, X., Cao, J., Li, Y., et al. (2026) · Brain Research Bulletin · doi:10.1016/j.brainresbull.2026.112052
Metadata
- Authors
- Banerjee, S., Cui, H., Xie, N., Tan, Z., Yang, S., Icyuz, M., Thannickal, V. J., Abraham, E., & Liu, G.
- Affiliations
- University of Alabama at Birmingham (US)
- Wake Forest University Health Sciences (US)
- Corresponding author
- Liu, Gang
- ORCID
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2013-12
- Volume
- 288
- Issue
- 49
- Pages
- 35428-35436
- ISSN
- 0021-9258 (ISSN-L)
- PMC
- PMC3853290
- OpenAlex
- W1989029018
- Cited by
- 258
- References
- 52
- Citations by year
- 2026: 10 · 2025: 12 · 2024: 19 · 2023: 25 · 2022: 29 · 2021: 33 · 2020: 17 · 2019: 25 · 2018: 24 · 2017: 19 · 2016: 21 · 2015: 14 · 2014: 9
- FWCI
- 5.16
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Heart, Lung, and Blood Institute (HL 076206, HL114470, HL-105473, R01HL105473, R01HL076206, P01HL114470)
- National Institute of Arthritis and Musculoskeletal and Skin Diseases (P30AR048311)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Life Sciences › Immunology and Microbiology › Immunology › Immune cells in cancer
- Life Sciences › Immunology and Microbiology › Immunology › Immune Response and Inflammation
- Keywords
- miR-125a-5p, macrophage polarization, M1 macrophages, M2 macrophages, classical activation, alternative activation, KLF13, TLR2, TLR4, MyD88, TRIF, LPS, IL-4, inflammation, phagocytosis, bactericidal activity, bone marrow-derived macrophages
- MeSH terms
- Animals, Escherichia coli, Inflammation, Macrophage Activation, Macrophages, Mice, Inbred C57BL, Repressor Proteins, Up-Regulation, Mice, Knockout, Cell Cycle Proteins, Adaptor Proteins, Vesicular Transport, MicroRNAs, Toll-Like Receptor 2, Toll-Like Receptor 4, Mice, Kruppel-Like Transcription Factors, Myeloid Differentiation Factor 88, Gene Knockdown Techniques
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review