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Structural Basis for the Specificity of Bipartite Nuclear Localization Sequence Binding by Importin-α

Open access
Fontes, Marcos R.M., Teh, Trazel, Jans, David, Brinkworth, Ross I., Kobe, Bostjan·2003·Journal of Biological Chemistry

Abstract

Importin-alpha is the nuclear import receptor that recognizes cargo proteins carrying conventional basic monopartite and bipartite nuclear localization sequences (NLSs) and facilitates their transport into the nucleus. Bipartite NLSs contain two clusters of basic residues, connected by linkers of variable lengths. To determine the structural basis of the recognition of diverse bipartite NLSs by mammalian importin-alpha, we co-crystallized a non-autoinhibited mouse receptor protein with peptides corresponding to the NLSs from human retinoblastoma protein and Xenopus laevis phosphoprotein N1N2, containing diverse sequences and lengths of the linker. We show that the basic clusters interact analogously in both NLSs, but the linker sequences adopt different conformations, whereas both make specific contacts with the receptor. The available data allow us to draw general conclusions about the specificity of NLS binding by importin-alpha and facilitate an improved definition of the consensus sequence of a conventional basic/bipartite NLS (KRX10-12KRRK) that can be used to identify novel nuclear proteins.

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Metadata

Authors
Fontes, M. R. M., Teh, T., Jans, D., Brinkworth, R. I., & Kobe, B.
Venue
Journal of Biological Chemistry
Publisher
Elsevier BV
Published
2003-07
Volume
278
Issue
30
Pages
27981-27987
ISSN
0021-9258 (ISSN-L)
OpenAlex
W1995160911
Cited by
186
References
2
FWCI
3.00
Type
journal article
Language
en
Open access
hybrid

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CoChat. (2026). Citation check: Structural Basis for the Specificity of Bipartite Nuclear Localization Sequence Binding by Importin-α. https://app.cochat.ai/papers/10.1074/jbc.m303275200
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Fontes, M. R. M., Teh, T., Jans, D., Brinkworth, R. I., & Kobe, B. (2003). Structural Basis for the Specificity of Bipartite Nuclear Localization Sequence Binding by Importin-α. Journal of Biological Chemistry. https://doi.org/10.1074/jbc.m303275200

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