Proteomic Analysis of in Vivo Phosphorylated Synaptic Proteins

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Items 101–200 of 320

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2. Phosphorylation Blocks the Activity of Tubulin Polymerization-promoting Protein (TPPP)
   Emma Hlavanda, Éva Klement, Endre Kókai, János Kovács, Orsolya Vincze, Natália Tőkési, Ferenc Orosz, Katalin F. Medzihradszky, Viktor Dombrádi, Judit Ovádi · 2007 · Journal of Biological Chemistry
3. Phosphoproteome analysis of the human Chang liver cells using SCX and a complementary mass spectrometric strategy
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4. NMDA receptor activation dephosphorylates AMPA receptor glutamate receptor 1 subunits at threonine 840
   Delgado, Jary Y., Coba, Marcelo, Anderson, Christopher N. G., Thompson, Kimberly R., Gray, Erin E., Heusner, Carrie L., Martin, Kelsey C., Grant, Seth G. N., O'Dell, Thomas J. · 2007 · The Journal of Neuroscience
5. Human Alzheimer’s disease synaptic O-GlcNAc site mapping and iTRAQ expression proteomics with ion trap mass spectrometry
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6. Profiling of mouse synaptosome proteome and phosphoproteome by IEF
   Michaela D. Filiou, Birgit Bisle, Stefan Reckow, Larysa Teplytska, Giuseppina Maccarrone, Christoph W. Turck · 2010 · Electrophoresis
7. Quantitative phosphoproteomics – an emerging key technology in signal‐transduction research
   Thiemo B. Schreiber, Nina Mäusbacher, Susanne B. Breitkopf, Kathrin Grundner‐Culemann, Henrik Daub · 2008 · PROTEOMICS
8. SynProt: A Database for Proteins of Detergent-Resistant Synaptic Protein Preparations
   Rainer Pielot, Karl‐Heinz Smalla, Anke Müller, Peter Landgraf, Anne‐Christin Lehmann, Elke Eisenschmidt, Utz‐Uwe Haus, Robert Weismantel, Eckart Dieter Gundelfinger, Daniela C. Dieterich · 2012 · Frontiers in Synaptic Neuroscience
9. Purification of phosphoproteins by immobilized metal affinity chromatography and its application to phosphoproteome analysis
   Mitsuyo Machida, Hidetaka Kosako, Kyoko Shirakabe, Michimoto Kobayashi, Masato Ushiyama, Junichi Inagawa, Joe Hirano, Tomoyo Nakano, Yasuhiko Bando, Eisuke Nishida et al. · 2007 · FEBS Journal
10. Quantification of Gel-separated Proteins and Their Phosphorylation Sites by LC-MS Using Unlabeled Internal Standards
    Pedro R. Cutillas, Barbara Geering, Mike D. Waterfield, Bart Vanhaesebroeck · 2005 · Molecular & Cellular Proteomics
11. Genome-wide analysis of H4K5 acetylation associated with fear memory in mice
    C Park, Hubert Rehrauer, Isabelle M. Mansuy · 2013 · BMC Genomics
12. IRBIT: A regulator of ion channels and ion transporters
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13. Paradoxical signaling regulates structural plasticity in dendritic spines
    Padmini Rangamani, Michael G. Levy, Shahid Khan, GEORGE F. OSTER · 2016 · Proceedings of the National Academy of Sciences
14. Prediction of kinase‐specific phosphorylation sites with sequence features by a log‐odds ratio approach
    Tingting Li, Fei Li, Xuegong Zhang · 2007 · Proteins Structure Function and Bioinformatics
15. Tyrosine Phosphorylation of Tau by the Src Family Kinases Lck and Fyn
    Timothy M.E. Scales, Pascal Derkinderen, Kit‐Yi Leung, Helen L. Byers, Malcolm Andrew Ward, Caroline Price, Ian N. Bird, Timothy Pietro Suren Perera, Stuart Kellie, Ritchie Williamson et al. · 2011 · Molecular Neurodegeneration
16. Protein phosphatase-1 is a novel regulator of the interaction between IRBIT and the inositol 1,4,5-trisphosphate receptor
    Benoit Devogelaere, Monique Beullens, Eva Sammels, Rita Derua, Etienne Waelkens, Johan Van Lint, Jan B. Parys, Ludwig Missiaen, Mathieu Bollen, Humbert DE SMEDT · 2007 · Biochemical Journal
17. Diversity of cAMP-Dependent Protein Kinase Isoforms and Their Anchoring Proteins in Mouse Ventricular Tissue
    Arjen Scholten, Toon A.B. van Veen, Marc A. Vos, Albert J. R. Heck · 2007 · Journal of Proteome Research
18. Alzheimer’s Disease: An Overview of Major Hypotheses and Therapeutic Options in Nanotechnology
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19. Identification of uranyl binding proteins from human kidney-2 cell extracts by immobilized uranyl affinity chromatography and mass spectrometry
    Alain Dedieu, Frédéric Bérenguer, Christian Basset, Odette Prat, Éric Quéméneur, Olivier Pible, Claude Vidaud · 2009 · Journal of Chromatography A
20. An unstructured protein with destructive potential: TPPP/p25 in neurodegeneration
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21. Affinity-recognition-based polymeric cryogels for protein depletion studies
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22. Dlgap1 knockout mice exhibit alterations of the postsynaptic density and selective reductions in sociability
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23. Characterizing Post-Translational Modifications and Their Effects on Protein Conformation Using NMR Spectroscopy
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24. The synapse proteome and phosphoproteome: a new paradigm for synapse biology
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25. Quantitation of protein phosphorylation in pregnant rat uteri using stable isotope dimethyl labeling coupled with IMAC
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26. Integration of Data from Liquid–Liquid Phase Separation Databases Highlights Concentration and Dosage Sensitivity of LLPS Drivers
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27. Metabolic constraints on synaptic learning and memory
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28. Immunoglobulin G depletion from human serum with metal-chelated beads under magnetic field
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29. Neuroproteomics of the Synapse and Drug Addiction
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30. Hypoxia and Leucine Deprivation Induce Human Insulin-Like Growth Factor Binding Protein-1 Hyperphosphorylation and Increase Its Biological Activity
    Maxim D. Seferovic, Rashad Ali, Hiroyasu Kamei, Suya Liu, Javad M. Khosravi, Steven H. Nazarian, Victor K. M. Han, Cunming Duan, Madhulika B. Gupta · 2008 · Endocrinology
31. Phosphoproteomic Analysis with a Solid-Phase Capture-Release-Tag Approach
    Huang-Chun Tseng, Huib Ovaa, Nancy Wei, Hidde L. Ploegh, Li‐Huei Tsai · 2005 · Chemistry & Biology
32. The IRBIT domain adds new functions to the AHCY family
    Benoit Devogelaere, Eva Sammels, Humbert DE SMEDT · 2008 · BioEssays
33. Kinase Networks Integrate Profiles of N-Methyl-d-aspartate Receptor-mediated Gene Expression in Hippocampus
    Marcelo P. Coba, Luis Miguel Valor, Maksym V. Kopanitsa, Nurudeen O. Afinowi, Seth G. N. Grant · 2008 · Journal of Biological Chemistry
34. Phosphoproteomics: new insights into cellular signaling.
    Marc C. Mumby, Deirdre L. Brekken · 2005 · Genome biology
35. Microtubule-associated protein 1B (MAP1B)-deficient neurons show structural presynaptic deficiencies in vitro and altered presynaptic physiology
    Felipe J. Bodaleo, Carolina Montenegro‐Venegas, Daniel R. Henríquez, Felipe A. Court, Christian Enrique González-Billault · 2016 · Scientific Reports
36. Regulation of phosphorylation at the postsynaptic density during different activity states of Ca2+/calmodulin-dependent protein kinase II
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37. Development and Application of a Phosphoproteomic Method Using Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC), IMAC, and LC–MS/MS Analysis to Study Marek’s Disease Virus Infection
    Ko-yi Chien, Hsiao‐Ching Liu, Michael B. Goshe · 2011 · Journal of Proteome Research
38. Deciphering Enzyme Function Using Peptide Arrays
    Alexandra Thiele, Gabriele I. Stangl, Mike Schutkowski · 2011 · Molecular Biotechnology
39. Phosphorylation of the Actin Binding Protein Drebrin at S647 Is Regulated by Neuronal Activity and PTEN
    Patricia Kreis, Rita Hendricusdottir, Louise Kay, Ismini E. Papageorgiou, Michiel T. van Diepen, Till G.A. Mack, Jonny Ryves, Adrian J. Harwood, Nicholas R. Leslie, Oliver Kann et al. · 2013 · PLoS ONE
40. Tyrosine phosphorylation of Munc18‐1 inhibits synaptic transmission by preventing SNARE assembly
    Marieke Meijer, Bernhard Dörr, Hanna C. A. Lammertse, Chrysanthi Blithikioti, Jan R.T. van Weering, Ruud F. G. Toonen, Thomas H. Söllner, Matthijs Verhage · 2017 · The EMBO Journal
41. Characterization of MAP1B heavy chain interaction with actin
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42. Cytosolic proteomic alterations in the nucleus accumbens of cocaine overdose victims
    Nilesh S. Tannu, Deborah C. Mash, Scott E. Hemby · 2006 · Molecular Psychiatry
43. Proteomics and signal transduction in the crustacean molting gland
    S. G. Lee, Donald L. Mykles · 2006 · Integrative and Comparative Biology
44. The Synaptosome as a Model System for Studying Synaptic Physiology
    Gareth John Evans · 2015 · Cold Spring Harbor Protocols
45. Identification and Characterization of Neuronal Mitogen-activated Protein Kinase Substrates Using a Specific Phosphomotif Antibody
    Dieter Edbauer, Dongmei Cheng, Matthew N. Batterton, Chi-Fong Wang, Duc Minh Duong, Michael B. Yaffe, Junmin Peng, Morgan Sheng · 2008 · Molecular & Cellular Proteomics
46. Understanding the Molecular Diversity of GABAergic Synapses
    Marco Sassoé‐Pognetto, Elena Frola, Giulia Pregno, Federica Briatore, Annarita Patrizi · 2011 · Frontiers in Cellular Neuroscience
47. Recent developments in mass spectrometry-based quantitative phosphoproteomicsThis paper is one of a selection of papers published in this Special Issue, entitled CSBMCB — Systems and Chemical Biology, and has undergone the Journal's usual peer review process.
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48. Optimization of phosphopeptide elution conditions in immobilized Fe(III) affinity chromatography
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49. Regulation of CaMKII In vivo: The Importance of Targeting and the Intracellular Microenvironment
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50. Compartmentation of GAPDH
    Norbert W. Seidler · 2012 · Advances in experimental medicine and biology
51. Nandrolone-induced hippocampal phosphorylation of NMDA receptor subunits and ERKs.
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52. Specific capture of uranyl protein targets by metal affinity chromatography
    Christian Basset, Alain Dedieu, Philippe Jean Guerin, Éric Quéméneur, Daniel J.M. Meyer, Claude Vidaud · 2008 · Journal of Chromatography A
53. Alteration in Synaptic Junction Proteins following Traumatic Brain Injury
    Lucia Merlo, Francesco Cimino, Filippo Flavio Angileri, Domenico La Torre, Alfredo Conti, Salvatore Massimiliano Cardali, Antonella Saija, Antonino Germanò · 2014 · Journal of Neurotrauma
54. A Comparative Perspective on Wnt/β-Catenin Signalling in Cell Fate Determination
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55. Identification of Phosphorylation Consensus Sequences and Endogenous Neuronal Substrates of the Psychiatric Risk Kinase TNIK
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56. Transcriptional and post-translational changes in the brain of mice deficient in cholesterol removal mediated by cytochrome P450 46A1 (CYP46A1)
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57. Mass Spectrometry Analysis of a Protein Kinase CK2β Subunit Interactome Isolated from Mouse Brain by Affinity Chromatography
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58. CDK5 downregulation enhances synaptic plasticity
    Rafael Posada‐Duque, Omar A. Ramírez, Steffen Härtel, Nibaldo C. Inestrosa, Felipe J. Bodaleo, Christian Enrique González-Billault, Alfredo Kirkwood, Gloria Patricia Cardona‐Gómez · 2016 · Cellular and Molecular Life Sciences
59. Immobilized Metal Affinity Adsorption for Antibody Depletion from Human Serum with Monosize Beads
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60. Robust Enrichment of Phosphorylated Species in Complex Mixtures by Sequential Protein and Peptide Metal-Affinity Chromatography and Analysis by Tandem Mass Spectrometry
    Mark O. Collins, Lu Yu, Holger Husi, Walter P. Blackstock, Jyoti S. Choudhary, Seth G. N. Grant · 2005 · Science s STKE
61. Non-covalent and covalent protein labeling in two-dimensional gel electrophoresis
    Beat Michel Riederer · 2008 · Journal of Proteomics
62. Supramolecular Signalling Complexes in the Nervous System
    Mark O. Collins, Seth G. N. Grant · 2007 · Springer eBooks
63. The Complex Phosphorylation Patterns That Regulate the Activity of Hsp70 and Its Cochaperones
    Lorea Velasco‐Carneros, Leire Dublang, Fernando Moro, Arturo Muga · 2019 · International Journal of Molecular Sciences
64. Toward a molecular catalogue of synapses
    Seth G. N. Grant · 2007 · Brain Research Reviews
65. Rab11 Supports Amphetamine-Stimulated Norepinephrine Transporter Trafficking
    Heinrich J. G. Matthies, Jessica L. Moore, Christine Saunders, Dawn Signor Matthies, Lynne A. Lapierre, James R. Goldenring, Randy Blakely, Aurelio Galli · 2010 · Journal of Neuroscience
66. The Synaptomic Theory of Behavior and Brain Disease
    Seth G. N. Grant · 2018 · Cold Spring Harbor Symposia on Quantitative Biology
67. Screening for EphB Signaling Effectors Using SILAC with a Linear Ion Trap-Orbitrap Mass Spectrometer
    Guoan Zhang, David Fenyö, Thomas A. Neubert · 2008 · Journal of Proteome Research
68. Synapse molecular complexity and the plasticity behaviour problem
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69. Dematin, a Component of the Erythrocyte Membrane Skeleton, Is Internalized by the Malaria Parasite and Associates with Plasmodium 14-3-3
    Marco Lalle, Chiara Currà, Fabio Ciccarone, Tomasino Pace, Serena Cecchetti, Luca Fantozzi, Bernhard Aÿ, Catherine Braun‐Breton, Marta Ponzi · 2010 · Journal of Biological Chemistry
70. The Proteomics of Neurodegeneration
    Mark D. Johnson, Li‐Rong Yu, Thomas P. Conrads, Yoshito Kinoshita, Takuma Uo, Joshua K. McBee, Timothy D. Veenstra, Richard S. Morrison · 2005 · American Journal of PharmacoGenomics
71. Mass spectrometry-based proteomics and peptidomics for biomarker discovery in neurodegenerative diseases.
    Xin Lan Wei, Lingjun Li · 2009 · PubMed Central
72. The complex regulatory function of the ligand-binding domain of the inositol 1,4,5-trisphosphate receptor
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73. The control of microtubule stability in vitro and in transfected cells by MAP1B and SCG10
    Percy Bondallaz, Anne Barbier, Sophia Soehrman Brossard, Gabriele Grenningloh, Beat Michel Riederer · 2006 · Cell Motility and the Cytoskeleton
74. Proteomic insights into synaptic signaling in the brain: the past, present and future
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75. IRBIT: It Is Everywhere
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76. Hsc70 chaperone activity is required for the cytosolic slow axonal transport of synapsin
    Archan Ganguly, Xuemei Han, Utpal Das, Lina Wang, Jonathan Loi, Jichao Sun, Daniel Gitler, Ghislaine Caillol, Christophe Leterrier, John R. Yates et al. · 2017 · The Journal of Cell Biology
77. Emerging proteomic approaches to identify the underlying pathophysiology of neurodevelopmental and neurodegenerative disorders
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78. Mass spectrometry-based phosphoproteomics reveals multisite phosphorylation on mammalian brain voltage-gated sodium and potassium channels
    Je‐Hyun Baek, Oscar Cerda, James S. Trimmer · 2010 · Seminars in Cell and Developmental Biology
79. Comparison of a Protein-Level and Peptide-Level Labeling Strategy for Quantitative Proteomics of Synaptosomes Using Isobaric Tags
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80. Revealing phosphoproteins playing role in tobacco pollen activated in vitro
    Jan Fíla, Andrea Matros, Sonja Radau, René Peiman Zahedi, Věra Čapková, Hans‐Peter Mock, David Honys · 2012 · PROTEOMICS
81. Phosphorylation of Cysteine String Protein Triggers a Major Conformational Switch
    Pryank Patel, Gerald R. Prescott, Robert D. Burgoyne, Lu‐Yun Lian, Alan Morgan · 2016 · Structure
82. Protein Phosphatase 2B (PP2B, Calcineurin) in Paramecium: Partial Characterization Reveals That Two Members of the Unusually Large Catalytic Subunit Family Have Distinct Roles in Calcium-Dependent Processes
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83. Changes in the Proteome after NeuronalZif268Overexpression
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84. Evolution of the spectrin-based membrane skeleton
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85. Formation of a salsolinol-like compound, the neurotoxin, 1-acetyl-6,7-dihydroxy-1,2,3,4-tetrahydroisoquinoline, in a cellular model of hyperglycemia and a rat model of diabetes
    Dewei Song, Nian Xin, Bingjie Xie, Yujuan Li, Lingyan Meng, HONG-MEI LI, Michael Schläppi, Yulin Deng · 2013 · International Journal of Molecular Medicine
86. Mapping of p140Cap Phosphorylation Sites: The EPLYA and EGLYA Motifs Have a Key Role in Tyrosine Phosphorylation and Csk Binding, and Are Substrates of the Abl Kinase
    Daniele Repetto, Simona Aramu, Elisabetta Boeri Erba, Nanaocha Sharma, Silvia Grasso, Isabella Russo, Ole Nørregaard Jensen, Sara Cabodi, Emilia Turco, Paola Di Stefano et al. · 2013 · PLoS ONE
87. SAPAP Scaffold Proteins: From Synaptic Function to Neuropsychiatric Disorders
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88. Phosphoproteomics Profiling of Human Skin Fibroblast Cells Reveals Pathways and Proteins Affected by Low Doses of Ionizing Radiation
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89. Regulation of Presynaptic Anchoring of the Scaffold Protein Bassoon by Phosphorylation-Dependent Interaction with 14-3-3 Adaptor Proteins
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90. Strain-dependent expression of signaling proteins in the mouse hippocampus
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91. Challenges in plasma membrane phosphoproteomics
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92. Neural deficits in a mouse model of PACS1 syndrome are corrected with PACS1- or HDAC6-targeting therapy
    Sabrina Villar-Pazos, Laurel Thomas, Yunhan Yang, Kun Chen, Jenea Barbara Lyles, Bradley J. Deitch, Joseph Ochaba, Karen Ling, Berit E. Powers, Sébastien Gingras et al. · 2023 · Nature Communications
93. Proteomic analysis of synaptosomal protein expression reveals that cerebral ischemia alters lysosomal Psap processing
    Willard J. Costain, Arsalan S. Haqqani, Ingrid Rasquinha, Marie-Soleil Giguère, Jacqueline Slinn, Bogdan Zurakowski, Danica B Stanimirovic · 2010 · PROTEOMICS
94. Protein fingerprints of cultured CA3-CA1 hippocampal neurons: comparative analysis of the distribution of synaptosomal and cytosolic proteins
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95. The role of microtubule-associated protein 1B in axonal growth and neuronal migration in the central nervous system.
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96. From genes to systems: New global strategies for the characterization of NCL biology
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97. A Clockwork Hypothesis: Synaptic Release by Rod Photoreceptors Must Be Regular
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98. Clinical proteomics in neurodegenerative diseases
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99. Studying the Protein Organization of the Postsynaptic Density by a Novel Solid Phase- and Chemical Cross-linking-based Technology
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100. The Role of Molecular Regulation and Targeting in Regulating Calcium/Calmodulin Stimulated Protein Kinases
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