CoChat
Sign Up
Cited by 26

The DOI matches its Crossref record.

Golgi-resident TRIO regulates membrane trafficking during neurite outgrowth

Tao, Tao, Sun, Jie, Peng, Yajing, Li, Yeqiong, Wang, Pei, Chen, Xin, Zhao, Wei, Zheng, Yan-Yan, Wei, Lisha, Wang, Wei, Zhou, Yuwei, Liu, Jianghuai, Shi, Yun Stone, Zhu, Min-Sheng·2019·Journal of Biological Chemistry
DOI 10.1074/jbc.ra118.007318
Open this paper in CoChat — free account

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1074/jbc.ra118.007318

Cites

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • RAB8 and RAB10 can cooperatively regulate other vesicular trafficking pathways including basolateral sorting, neurite outgrowth, and ciliogenesis.

    “and with previous reports showing that RAB8 and RAB10 can cooperatively regulate other vesicular trafficking pathways including basolateral sorting, neurite outgrowth, and ciliogenesis [42,43,44,45].”

    From Distinct Roles for RAB10 and RAB29 in Pathogenic LRRK2-Mediated Endolysosomal Trafficking Alterations (2020) · cites this paper as [45]

    In “RAB8/RAB10 activation is required for TRIO-mediated neurite outgrowth” (page unavailable), the paper reports that reducing either RAB8 or RAB10 inhibits neurite outgrowth in cerebellar granule neurons. This supports their shared involvement in neurite outgrowth, but our copy does not establish that they cooperatively regulate basolateral sorting or ciliogenesis. (LLM, conf=0.86)

    Experimental — accuracy not yet measured

  • RAB10 modulates a variety of membrane trafficking events including exocytic polarized targeting and endocytic recycling, and can perform functions partially redundant with RAB8A.

    “RAB10 has been described to modulate a variety of membrane trafficking events including exocytic polarized targeting and endocytic recycling events [41], and can perform functions partially redundant with those of RAB8A [42,43,44,45].”

    From Distinct Roles for RAB10 and RAB29 in Pathogenic LRRK2-Mediated Endolysosomal Trafficking Alterations (2020) · cites this paper as [45]

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 57

  1. Pfenninger, 2009, Plasma membrane expansion: a neuron's Herculean task, Nat. Rev. Neurosci, 10, 251, 10.1038/nrn2593 · DOI
  2. Wojnacki, 2016, Membrane traffic during axon development, Dev. Neurobiol, 76, 1185, 10.1002/dneu.22390 · DOI
  3. Dent, 2011, The growth cone cytoskeleton in axon outgrowth and guidance, Cold Spring Harb. Perspect. Biol, 3, a001800, 10.1101/cshperspect.a001800 · DOI
  4. Kalil, 2005, Touch and go: guidance cues signal to the growth cone cytoskeleton, Curr. Opin. Neurobiol, 15, 521, 10.1016/j.conb.2005.08.005 · DOI
  5. Tojima, 2015, Exocytic and endocytic membrane trafficking in axon development, Dev. Growth Differ, 57, 291, 10.1111/dgd.12218 · DOI
  6. Hall, 1998, Rho GTPases and the actin cytoskeleton, Science, 279, 509, 10.1126/science.279.5350.509 · DOI
  7. Hall, 2010, Rho and Ras GTPases in axon growth, guidance, and branching, Cold Spring Harb. Perspect. Biol, 2, a001818, 10.1101/cshperspect.a001818 · DOI · Paper page
  8. Jaffe, 2005, Rho GTPases: biochemistry and biology, Annu. Rev. Cell Dev. Biol, 21, 247, 10.1146/annurev.cellbio.21.020604.150721 · DOI · Paper page
  9. Da Silva, 2003, RhoA/ROCK regulation of neuritogenesis via profilin IIa-mediated control of actin stability, J. Cell Biol, 162, 1267, 10.1083/jcb.200304021 · DOI
  10. Garvalov, 2007, Cdc42 regulates cofilin during the establishment of neuronal polarity, J. Neurosci, 27, 13117, 10.1523/JNEUROSCI.3322-07.2007 · DOI · Paper page
  11. Govek, 2005, The role of the Rho GTPases in neuronal development, Genes Dev, 19, 1, 10.1101/gad.1256405 · DOI
  12. Tahirovic, 2010, Rac1 regulates neuronal polarization through the WAVE complex, J. Neurosci, 30, 6930, 10.1523/JNEUROSCI.5395-09.2010 · DOI
  13. Hutagalung, 2011, Role of Rab GTPases in membrane traffic and cell physiology, Physiol. Rev, 91, 119, 10.1152/physrev.00059.2009 · DOI · Paper page
  14. Stenmark, 2009, Rab GTPases as coordinators of vesicle traffic, Nat. Rev. Mol. Cell Biol, 10, 513, 10.1038/nrm2728 · DOI · Paper page
  15. Villarroel-Campos, 2016, Rab GTPase signaling in neurite outgrowth and axon specification, Cytoskeleton, 73, 498, 10.1002/cm.21303 · DOI
  16. Mizuno-Yamasaki, 2012, GTPase networks in membrane traffic, Annu. Rev. Biochem, 81, 637, 10.1146/annurev-biochem-052810-093700 · DOI
  17. Debant, 1996, The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains, Proc. Natl. Acad. Sci. U.S.A, 93, 5466, 10.1073/pnas.93.11.5466 · DOI
  18. Awasaki, 2000, The Drosophila trio plays an essential role in patterning of axons by regulating their directional extension, Neuron, 26, 119, 10.1016/S0896-6273(00)81143-5 · DOI
  19. Bateman, 2000, The guanine nucleotide exchange factor trio mediates axonal development in the Drosophila embryo, Neuron, 26, 93, 10.1016/S0896-6273(00)81141-1 · DOI
  20. Liebl, 2000, Dosage-sensitive, reciprocal genetic interactions between the Abl tyrosine kinase and the putative GEF trio reveal trio's role in axon pathfinding, Neuron, 26, 107, 10.1016/S0896-6273(00)81142-3 · DOI
  21. Newsome, 2000, Trio combines with Dock to regulate Pak activity during photoreceptor axon pathfinding in Drosophila, Cell, 101, 283, 10.1016/S0092-8674(00)80838-7 · DOI
  22. Steven, 1998, UNC-73 activates the Rac GTPase and is required for cell and growth cone migrations in C. elegans, Cell, 92, 785, 10.1016/S0092-8674(00)81406-3 · DOI
  23. Zheng, 2016, GEFs and Rac GTPases control directional specificity of neurite extension along the anterior-posterior axis, Proc. Natl. Acad. Sci. U.S.A, 113, 6973, 10.1073/pnas.1607179113 · DOI
  24. Backer, 2007, Trio controls the mature organization of neuronal clusters in the hindbrain, J. Neurosci, 27, 10323, 10.1523/JNEUROSCI.1102-07.2007 · DOI
  25. Briançon-Marjollet, 2008, Trio mediates netrin-1–induced Rac1 activation in axon outgrowth and guidance, Mol. Cell. Biol, 28, 2314, 10.1128/MCB.00998-07 · DOI
  26. O'Brien, 2000, Skeletal muscle deformity and neuronal disorder in Trio exchange factor-deficient mouse embryos, Proc. Natl. Acad. Sci. U.S.A, 97, 12074, 10.1073/pnas.97.22.12074 · DOI
  27. Peng, 2010, Trio is a key guanine nucleotide exchange factor coordinating regulation of the migration and morphogenesis of granule cells in the developing cerebellum, J. Biol. Chem, 285, 24834, 10.1074/jbc.M109.096537 · DOI
  28. Zong, 2015, Trio gene is required for mouse learning ability, Brain Res, 1608, 82, 10.1016/j.brainres.2015.02.040 · DOI
  29. Herring, 2016, Kalirin and Trio proteins serve critical roles in excitatory synaptic transmission and LTP, Proc. Natl. Acad. Sci. U.S.A, 113, 2264, 10.1073/pnas.1600179113 · DOI · Paper page
  30. Ba, 2016, TRIO loss of function is associated with mild intellectual disability and affects dendritic branching and synapse function, Hum. Mol. Genet, 25, 892, 10.1093/hmg/ddv618 · DOI
  31. Katrancha, 2017, Neurodevelopmental disease-associated de novo mutations and rare sequence variants affect TRIO GDP/GTP exchange factor activity, Hum. Mol. Genet, 26, 4728, 10.1093/hmg/ddx355 · DOI
  32. Pengelly, 2016, Mutations specific to the Rac-GEF domain of TRIO cause intellectual disability and microcephaly, J. Med. Genet, 53, 735, 10.1136/jmedgenet-2016-103942 · DOI
  33. Sadybekov, 2017, An autism spectrum disorder-related de novo mutation hotspot discovered in the GEF1 domain of Trio, Nat. Commun, 8, 601, 10.1038/s41467-017-00472-0 · DOI · Paper page
  34. Bateman, 2001, The Trio family of guanine-nucleotide-exchange factors: regulators of axon guidance, J. Cell Sci, 114, 1973, 10.1242/jcs.114.11.1973 · DOI
  35. McPherson, 2005, Multiple novel isoforms of Trio are expressed in the developing rat brain, Gene, 347, 125, 10.1016/j.gene.2004.12.028 · DOI
  36. Portales-Casamar, 2006, Identification of novel neuronal isoforms of the Rho-GEF Trio, Biol. Cell, 98, 183, 10.1042/BC20050009 · DOI
  37. Beck, 2005, Spectrins and the Golgi, Biochim. Biophys. Acta, 1744, 374, 10.1016/j.bbamcr.2005.04.008 · DOI
  38. Danielian, 1998, Modification of gene activity in mouse embryos in utero by a tamoxifen-inducible form of Cre recombinase, Curr. Biol, 8, 1323, 10.1016/S0960-9822(07)00562-3 · DOI
  39. Muzumdar, 2007, A global double-fluorescent Cre reporter mouse, Genesis, 45, 593, 10.1002/dvg.20335 · DOI · Paper page
  40. Burack, 2000, The role of selective transport in neuronal protein sorting, Neuron, 26, 465, 10.1016/S0896-6273(00)81178-2 · DOI
  41. Gärtner, 2014, Distinct temporal hierarchies in membrane and cytoskeleton dynamics precede the morphological polarization of developing neurons, J. Cell Sci, 127, 4409
  42. Deng, 2014, JIP1 mediates anterograde transport of Rab10 cargos during neuronal polarization, J. Neurosci, 34, 1710, 10.1523/JNEUROSCI.4496-13.2014 · DOI · Paper page
  43. Huber, 1995, A deficiency of the small GTPase rab8 inhibits membrane traffic in developing neurons, Mol. Cell. Biol, 15, 918, 10.1128/MCB.15.2.918 · DOI
  44. Neumann, 2017, KymoAnalyzer: a software tool for the quantitative analysis of intracellular transport in neurons, Traffic, 18, 71, 10.1111/tra.12456 · DOI
  45. Wang, 2011, Lgl1 activation of rab10 promotes axonal membrane trafficking underlying neuronal polarization, Dev. Cell, 21, 431, 10.1016/j.devcel.2011.07.007 · DOI
  46. Homma, 2016, Rabin8 regulates neurite outgrowth in both GEF activity–dependent and –independent manners, Mol. Biol. Cell, 27, 2107, 10.1091/mbc.E16-02-0091 · DOI · Paper page
  47. Campa, 2018, Rab11 activity and PtdIns(3)P turnover removes recycling cargo from endosomes, Nat. Chem. Biol, 14, 801, 10.1038/s41589-018-0086-4 · DOI
  48. Franco, 2014, PI3K class II alpha controls spatially restricted endosomal PtdIns3P and Rab11 activation to promote primary cilium function, Dev. Cell, 28, 647, 10.1016/j.devcel.2014.01.022 · DOI
  49. Hattula, 2006, Characterization of the Rab8-specific membrane traffic route linked to protrusion formation, J. Cell Sci, 119, 4866, 10.1242/jcs.03275 · DOI
  50. Wang, 2015, Activation of Rab8 guanine nucleotide exchange factor Rabin8 by ERK1/2 in response to EGF signaling, Proc. Natl. Acad. Sci. U.S.A, 112, 148, 10.1073/pnas.1412089112 · DOI
  51. Ultanir, 2012, Chemical genetic identification of NDR1/2 kinase substrates AAK1 and Rabin8 Uncovers their roles in dendrite arborization and spine development, Neuron, 73, 1127, 10.1016/j.neuron.2012.01.019 · DOI · Paper page
  52. Bouquier, 2009, A cell active chemical GEF inhibitor selectively targets the Trio/RhoG/Rac1 signaling pathway, Chem. Biol, 16, 657, 10.1016/j.chembiol.2009.04.012 · DOI
  53. Li, 2002, Regulation of Rho GTPases by crosstalk and neuronal activity in vivo, Neuron, 33, 741, 10.1016/S0896-6273(02)00621-9 · DOI
  54. Lagenaur, 1987, An L1-like molecule, the 8D9 antigen, is a potent substrate for neurite extension, Proc. Natl. Acad. Sci. U.S.A, 84, 7753, 10.1073/pnas.84.21.7753 · DOI
  55. Bolte, 2006, A guided tour into subcellular colocalization analysis in light microscopy, J. Microsc, 224, 213, 10.1111/j.1365-2818.2006.01706.x · DOI
  56. Zeitvogel, 2016, ScatterJn: an ImageJ plugin for scatterplot-matrix analysis and classification of spatially resolved analytical microscopy data, J. Open Res. Software, 4, e5, 10.5334/jors.89 · DOI
  57. Zheng, 2011, Fluorescence recovery after photobleaching (FRAP) of fluorescence tagged proteins in dendritic spines of cultured hippocampal neurons, J. Vis. Exp, e2568

Cited by

Sorted by citations

Metadata

Authors
Tao, T., Sun, J., Peng, Y., Li, Y., Wang, P., Chen, X., Zhao, W., Zheng, Y.-Y., Wei, L., Wang, W., Zhou, Y., Liu, J., Shi, Y. S., & Zhu, M.-S.
Venue
Journal of Biological Chemistry
Publisher
Elsevier BV
Published
2019-07
Volume
294
Issue
28
Pages
10954-10968
ISSN
0021-9258
DOI
10.1074/jbc.ra118.007318
Cited by
26
References
0
Language
en
Licence
Funders
National Natural Science Foundation of China (31272311, 31330034)

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review