APAF1 is a key transcriptional target for p53 in the regulation of neuronal cell death
Open accessAbstract
p53 is a transcriptional activator which has been implicated as a key regulator of neuronal cell death after acute injury. We have shown previously that p53-mediated neuronal cell death involves a Bax-dependent activation of caspase 3; however, the transcriptional targets involved in the regulation of this process have not been identified. In the present study, we demonstrate that p53 directly upregulates Apaf1 transcription as a critical step in the induction of neuronal cell death. Using DNA microarray analysis of total RNA isolated from neurons undergoing p53-induced apoptosis a 5–6-fold upregulation of Apaf1 mRNA was detected. Induction of neuronal cell death by camptothecin, a DNA-damaging agent that functions through a p53-dependent mechanism, resulted in increased Apaf1 mRNA in p53-positive, but not p53-deficient neurons. In both in vitro and in vivo neuronal cell death processes of p53-induced cell death, Apaf1 protein levels were increased. We addressed whether p53 directly regulates Apaf1 transcription via the two p53 consensus binding sites in the Apaf1 promoter. Electrophoretic mobility shift assays demonstrated p53–DNA binding activity at both p53 consensus binding sequences in extracts obtained from neurons undergoing p53-induced cell death, but not in healthy control cultures or when p53 or the p53 binding sites were inactivated by mutation. In transient transfections in a neuronal cell line with p53 and Apaf1 promoter–luciferase constructs, p53 directly activated the Apaf1 promoter via both p53 sites. The importance of Apaf1 as a p53 target gene in neuronal cell death was evaluated by examining p53-induced apoptotic pathways in primary cultures of Apaf1-deficient neurons. Neurons treated with camptothecin were significantly protected in the absence of Apaf1 relative to those derived from wild-type littermates. Together, these results demonstrate that Apaf1 is a key transcriptional target for p53 that plays a pivotal role in the regulation of apoptosis after neuronal injury.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
APAF1 is activated by p53.
“APAF1 is activated by p53 too.183, 184, 185”
From Census and evaluation of p53 target genes (2017) · cites this paper as [184]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Li, P., Nijhawan, D., Budihardjo, I., Srinivasula, S. M., Ahmad, M., Alnemri, E. S., & Wang, X. (1997) · Cell · doi:10.1016/s0092-8674(00)80434-1 · Cited by 7,289 · see citing works
Tumor suppressor p53 is a direct transcriptional activator of the human bax gene
Toshiyuki, M., & Reed, J. C. (1995) · Cell · doi:10.1016/0092-8674(95)90412-3 · Cited by 4,063 · see citing works
PUMA, a Novel Proapoptotic Gene, Is Induced by p53
Nakano, K., & Vousden, K. H. (2001) · Molecular Cell · doi:10.1016/s1097-2765(01)00214-3 · Cited by 2,315 · see citing works
Noxa, a BH3-Only Member of the Bcl-2 Family and Candidate Mediator of p53-Induced Apoptosis
Oda, E., Ohki, R., Murasawa, H., Nemoto, J., Shibue, T., Yamashita, T., Tokino, T., Taniguchi, T., & Tanaka, †. N. (2000) · Science · doi:10.1126/science.288.5468.1053 · Cited by 2,112 · see citing works
Definition of a consensus binding site for p53
El-Deiry, W. S., Kern, S. E., Pietenpol, J. A., Kinzler, K. W., & Vogelstein, B. (1992) · Nature Genetics · doi:10.1038/ng0492-45 · Cited by 1,985 · see citing works
Decreased apoptosis in the brain and premature lethality in CPP32-deficient mice
Kuida, K., Zheng, T. S., Na, S., Kuan, C.-Y., Yang, D., Karasuyama, H., RAKIC, P. T., & Flavell, R. A. (1996) · Nature · doi:10.1038/384368a0 · Cited by 1,881 · see citing works
Reduced Apoptosis and Cytochrome c–Mediated Caspase Activation in Mice Lacking Caspase 9
Kuida, K., Haydar, T. F., Kuan, C.-Y., Gu, Y., Taya, C., Karasuyama, H., Su, M. S.-S., Rakic, P., & Flavell, R. A. (1998) · Cell · doi:10.1016/s0092-8674(00)81476-2 · Cited by 1,643 · see citing works
PUMA Induces the Rapid Apoptosis of Colorectal Cancer Cells
Yu, J., Zhang, L., Hwang, P. M., Kinzler, K. W., & Vogelstein, B. (2001) · Molecular Cell · doi:10.1016/s1097-2765(01)00213-1 · Cited by 1,282 · see citing works
The glucose oxidase-DAB-nickel method in peroxidase histochemistry of the nervous system
Shu, S., Ju, G., & Fan, L. (1988) · Neuroscience Letters · doi:10.1016/0304-3940(88)90346-1 · Cited by 1,235 · see citing works
Oda, K., Arakawa, H., Tanaka, T., Matsuda, K., Tanikawa, C., Mori, T., Nishimori, H., Tamai, K., Tokino, T., Nakamura, Y., et al. (2000) · Cell · doi:10.1016/s0092-8674(00)00073-8 · Cited by 1,162 · see citing works
Apaf1 Is Required for Mitochondrial Pathways of Apoptosis and Brain Development
Yoshida, H., Kong, Y., Yoshida, R., Elia, A., Hakem, A., Hakem, R., Penninger, J. M., & Mak, T. W. (1998) · Cell · doi:10.1016/s0092-8674(00)81733-x · Cited by 1,138 · see citing works
p14ARF links the tumour suppressors RB and p53
Bates, S., Phillips, A. C., Clark, P. A., Stott, F., Peters, G., Ludwig, R. L., & Vousden, K. H. (1998) · Nature · doi:10.1038/25867 · Cited by 918 · see citing works
Apaf1 (CED-4 Homolog) Regulates Programmed Cell Death in Mammalian Development
Cecconi, F., Álvarez-Bolado, G., Meyer, B. I., Roth, K. A., & Gruß, P. (1998) · Cell · doi:10.1016/s0092-8674(00)81732-8 · Cited by 894 · see citing works
Self-citationHara, H., Friedlander, R. M., Gagliardini, V., Ayata, C., Fink, K., Huang, Z., Shimizu‐Sasamata, M., Yuan, J., & Moskowitz, M. A. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.5.2007 · Cited by 835 · see citing works
Nitatori, T., Sato, N., Waguri, S., Karasawa, Y., Araki, H., Shibanai, K., Kominami, E., & Uchiyama, Y. (1995) · Journal of Neuroscience · doi:10.1523/jneurosci.15-02-01001.1995 · Cited by 832 · see citing works
Regulation ofp53downstream genes
El‐Deiry, W. S. (1998) · Seminars in Cancer Biology · doi:10.1006/scbi.1998.0097 · Cited by 797 · see citing works
Evidence for apoptotic cell death in Huntington disease and excitotoxic animal models
Portera‐Cailliau, C., Hedreen, J. C., Price, D., & Koliatsos, V. (1995) · Journal of Neuroscience · doi:10.1523/jneurosci.15-05-03775.1995 · Cited by 607 · see citing works
Apaf-1 is a transcriptional target for E2F and p53
Moroni, M. C., Hickman, E. S., Denchi, E. L., Caprara, G., Colli, E., Cecconi, F., Müller, H., & Helin, K. (2001) · Nature Cell Biology · doi:10.1038/35078527 · Cited by 593 · see citing works
Self-citationYakovlev, A. G., Knoblach, S. M., Fan, L., Fox, G. B., Goodnight, R., & Faden, A. I. (1997) · Journal of Neuroscience · doi:10.1523/jneurosci.17-19-07415.1997 · Cited by 575 · see citing works
Endres, M., Namura, S., Shimizu‐Sasamata, M., Waeber, C., Zhang, L., Gómez‐Isla, T., Hyman, B. T., & Moskowitz, M. A. (1998) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1097/00004647-199803000-00002 · Cited by 543 · see citing works
Nagasawa, H., & Kogure, K. (1989) · Stroke · doi:10.1161/01.str.20.8.1037 · Cited by 524 · see citing works
Evidence of apoptotic cell death after experimental traumatic brain injury in the rat.
Rink, A. D., Fung, K., Trojanowski, J. Q., Lee, V. M.-Y., Neugebauer, E. A. M., & McIntosh, T. K. (1995) · Europe PMC (PubMed Central) · Cited by 521 · see citing works
Cheng, Y., Deshmukh, M., D'Costa, A. P., Demaro, J. A., Gidday, J. M., Shah, A. R., Sun, Y., Jacquin, M., Johnson, E. M., & Holtzman, D. M. (1998) · Journal of Clinical Investigation · doi:10.1172/jci2169 · Cited by 505 · see citing works
Evidence for Apoptotic Cell Death in Alzheimer's Disease
Smale, G., Nichols, N. R., Brady, D. R., Finch, C. E., & Horton, W. E. (1995) · Experimental Neurology · doi:10.1006/exnr.1995.1025 · Cited by 488 · see citing works
Role of cytochrome c and dATP/ATP hydrolysis in Apaf‐1‐mediated caspase‐9 activation and apoptosis
Hu, Y., Benedict, M. A., Ding, L., et al. (1999) · The EMBO Journal · doi:10.1093/emboj/18.13.3586 · Cited by 454 · see citing works
Bax-Dependent Caspase-3 Activation Is a Key Determinant in p53-Induced Apoptosis in Neurons
Cregan, S. P., MacLaurin, J. G., Craig, C. G., Robertson, G. S., Nicholson, D. W., Park, D. S., & Slack, R. S. (1999) · Journal of Neuroscience · doi:10.1523/jneurosci.19-18-07860.1999 · Cited by 385 · see citing works
Self-citationTsai, K. Y., Hu, Y., Macleod, K. F., Crowley, D., Yamasaki, L., & Jacks, T. (1998) · Molecular Cell · doi:10.1016/s1097-2765(00)80274-9 · Cited by 372 · see citing works
Loss of the p53 tumor suppressor gene protects neurons from kainate- induced cell death
Morrison, R. S., Wenzel, H. J., Kinoshita, Y., Robbins, C. A., Donehower, L. A., & Schwartzkroin, P. A. (1996) · Journal of Neuroscience · doi:10.1523/jneurosci.16-04-01337.1996 · Cited by 370 · see citing works
Bax Involvement in p53-Mediated Neuronal Cell Death
Xiang, H., Kinoshita, Y., Knudson, C. M., Korsmeyer, S. J., Schwartzkroin, P. A., & Morrison, R. S. (1998) · Journal of Neuroscience · doi:10.1523/jneurosci.18-04-01363.1998 · Cited by 331 · see citing works
Macleod, K. F., Hu, Y., & Jacks, T. (1996) · The EMBO Journal · doi:10.1002/j.1460-2075.1996.tb01006.x · Cited by 321 · see citing works
Attenuation of p53 Expression Protects against Focal Ischemic Damage in Transgenic Mice
Crumrine, R. C., Thomas, A. L., & Morgan, P. F. (1994) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1038/jcbfm.1994.119 · Cited by 306 · see citing works
Specific loss of apoptotic but not cell‐cycle arrest function in a human tumor derived p53 mutant.
Rowan, S., Ludwig, R., Haupt, Y., Bates, S., Lü, X., Oren, M., & Vousden, K. H. (1996) · The EMBO Journal · doi:10.1002/j.1460-2075.1996.tb00418.x · Cited by 300 · see citing works
Li, Y., Sharov, V. G., Jiang, N., Zaloga, C., Sabbah, H. N., & Chopp, M. (1995) · Europe PMC (PubMed Central) · Cited by 260 · see citing works
Evidence for p53-Mediated Modulation of Neuronal Viability
Xiang, H., Hochman, D. W., Saya, H., et al. (1996) · Journal of Neuroscience · doi:10.1523/jneurosci.16-21-06753.1996 · Cited by 246 · see citing works
Neuroprotection by the Inhibition of Apoptosis
Robertson, G. S., Crocker, S. J., Nicholson, D. W., et al. (2000) · Brain Pathology · doi:10.1111/j.1750-3639.2000.tb00262.x · Cited by 226 · see citing works
Li, Y., Chopp, M., Zhang, Z. G., Zaloga, C., Niewenhuis, L. M., & Gautam, S. (1994) · Stroke · doi:10.1161/01.str.25.4.849 · Cited by 181 · see citing works
Ni, B., Wu, X., Yuan, S., et al. (1998) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1097/00004647-199803000-00003 · Cited by 161 · see citing works
Hypoxia-induced apoptosis: effect of hypoxic severity and role of p53 in neuronal cell death
Banasiak, K. J., & Haddad, G. G. (1998) · Brain Research · doi:10.1016/s0006-8993(98)00286-8 · Cited by 158 · see citing works
Induction and Modulation of Cerebellar Granule Neuron Death by E2F-1
O'Hare, M. J., Hou, S., Morris, E. J., Cregan, S. P., Xu, Q., Slack, R. S., & Park, D. S. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m001725200 · Cited by 143 · see citing works
Self-citationActivation of CPP-32 protease in hippocampal neurons following ischemia and epilepsy
Gillardon, F., Böttiger, B. W., Schmitz, B., et al. (1997) · Molecular Brain Research · doi:10.1016/s0169-328x(97)00162-9 · Cited by 140 · see citing works
Brady, H. J. M., Salomons, G. S., Bobeldijk, R. C., & Berns, A. J. M. (1996) · The EMBO Journal · doi:10.1002/j.1460-2075.1996.tb00463.x · Cited by 125 · see citing works
Lee, H., Hammond, D., Large, T., et al. (1990) · Journal of Neuroscience · doi:10.1523/jneurosci.10-06-01779.1990 · Cited by 125 · see citing works
Slack, R. S., Belliveau, D. J., Rosenberg, M., Atwal, J. K., Lochmüller, H., Aloyz, R. S., Haghighi, A. P., Lach, B., Seth, P. K., Cooper, E. A., et al. (1996) · The Journal of Cell Biology · doi:10.1083/jcb.135.4.1085 · Cited by 124 · see citing works
Self-citationProgrammed Cell Death in the Developing Nervous System
Henderson, C. E. (1996) · Neuron · doi:10.1016/s0896-6273(00)80191-9 · Cited by 122 · see citing works
Involvement of Caspase 3 in Apoptotic Death of Cortical Neurons Evoked by DNA Damage
Keramaris, E., Stefanis, L., MacLaurin, J. G., Harada, N., Takaku, K., Ishikawa, T., Taketo, M. M., Robertson, G. S., Nicholson, D. W., Slack, R. S., et al. (2000) · Molecular and Cellular Neuroscience · doi:10.1006/mcne.2000.0838 · Cited by 87 · see citing works
Self-citationHippocampal Myc and p53 expression following transient global ischemia
McGahan, L., Hakim, A. M., & Robertson, G. S. (1998) · Molecular Brain Research · doi:10.1016/s0169-328x(98)00038-2 · Cited by 83 · see citing works
Self-citationNuclear accumulation of p53 protein following kainic acid-induced seizures
Sakhi, S., Sun, N., Wing, L. L., et al. (1996) · Neuroreport · doi:10.1097/00001756-199601310-00028 · Cited by 83 · see citing works
Cycloheximide phase-shifts, but does not prevent, de novo Krox-24 protein expression
Hughes, P. E., Alexi, T., & Dragunow, M. (1997) · Neuroreport · doi:10.1097/00001756-199710200-00015 · Cited by 73 · see citing works
Watanabe, H., Ohta, S., Kumon, Y., et al. (1999) · Brain Research · doi:10.1016/s0006-8993(99)01652-2 · Cited by 49 · see citing works
Helper-dependent adenovirus vectors: their use as a gene delivery system to neurons
Cregan, S., MacLaurin, J. G., Gendron, T., et al. (2000) · Gene Therapy · doi:10.1038/sj.gt.3301208 · Cited by 47 · see citing works
Self-citationTATA‐Driven Transcriptional Initiation and Regulation of the Rat Serotonin 5‐HT 1A Receptor Gene
Storring, J. M., Charest, A., Cheng, P., et al. (1999) · Journal of Neurochemistry · doi:10.1046/j.1471-4159.1999.0722238.x · Cited by 41 · see citing works
織田, 克. (2001) · Medical Entomology and Zoology · Cited by 22 · see citing works
β‐amyloid binds to p75NTR and activates NFκB in human neuroblastoma cells
Kuner, P., Schubenel, R., & Hertel, C. (1998) · Journal of Neuroscience Research · doi:10.1002/(sici)1097-4547(19981215)54:6 · Cited by 1 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Census and evaluation of p53 target genes
Fischer, M. (2017) · Oncogene · doi:10.1038/onc.2016.502 · Cited by 971 · see citing works
Coordinated regulation of life and death by RB
Chau, B. N., & Wang, J. Y. J. (2003) · Nature Reviews Cancer · doi:10.1038/nrc993 · Cited by 292 · see citing works
The transcription factor p53: Not a repressor, solely an activator.
Fischer, M., Steiner, L., & Engeland, K. (2014) · Cell Cycle · doi:10.4161/15384101.2014.949083 · Cited by 153 · see citing works
- Authors
- Fortin, A., Cregan, S. P., MacLaurin, J. G., Kushwaha, N., Hickman, E. S., Thompson, C. S., Hakim, A., Albert, P. R., Cecconi, F., Helin, K., Park, D. S., & Slack, R. S.
- Affiliations
- University of Ottawa (CA)
- European Institute of Oncology (IT)
- University of Rome Tor Vergata (IT)
- Corresponding author
- Fortin, Andre
- Venue
- The Journal of Cell Biology
- Publisher
- Rockefeller University Press
- Published
- 2001-10-08
- Volume
- 155
- Issue
- 2
- Pages
- 207-216
- ISSN
- 0021-9525 (ISSN-L)
- 1540-8140
- PMC
- PMC2198828
- OpenAlex
- W2119044841
- Cited by
- 194
- References
- 54
- Citations by year
- 2025: 4 · 2024: 3 · 2023: 6 · 2022: 2 · 2021: 4 · 2020: 4 · 2019: 5 · 2018: 2 · 2017: 3 · 2016: 5 · 2015: 4 · 2014: 2 · 2013: 5 · 2012: 3
- FWCI
- 6.65
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- cc-by-nc-sa
- Locations
- The Journal of Cell Biology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion, cc-by-nc-sa)
- PubMed Central (publishedVersion, cc-by-nc-sa)
- PubMed (publishedVersion)
- Cineca Institutional Research Information System (Tor Vergata University) (submittedVersion)
- Research at the University of Copenhagen (University of Copenhagen) (submittedVersion)
- Funders
- Wellcome Trust
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Cell death mechanisms and regulation
- Health Sciences › Medicine › Oncology › Cancer-related Molecular Pathways
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Keywords
- Apaf-1, p53, neuronal cell death, apoptosis, transcriptional regulation, p53 target genes, p53 binding sites, camptothecin, Bax, caspase-3, DNA damage, neuroprotection
- MeSH terms
- Animals, Base Sequence, Camptothecin, Cell Line, Cells, Cultured, Brain Ischemia, Mice, Transgenic, Neurons, Promoter Regions, Genetic, Proteins, RNA, Messenger, Protein Biosynthesis, Transcriptional Activation, Tumor Suppressor Protein p53, Apoptosis, Mice, Apoptotic Protease-Activating Factor 1
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review