Ikaros is absolutely required for pre-B cell differentiation by attenuating IL-7 signals
Open accessAbstract
Pre-B cell receptor (pre-BCR) signaling and migration from IL-7-rich environments cooperate to drive pre-B cell differentiation via transcriptional programs that remain unclear. We show that the Ikaros transcription factor is required for the differentiation of large pre-B to small pre-B cells. Mice deleted for Ikaros in pro/pre-B cells show a complete block of differentiation at the fraction C' stage, and Ikaros-null pre-B cells cannot differentiate upon withdrawal of IL-7 in vitro. Restoration of Ikaros function rescues pre-B cell differentiation in vitro and in vivo and depends on DNA binding. Ikaros is required for the down-regulation of the pre-BCR, Igκ germline transcription, and Ig L chain recombination. Furthermore, Ikaros antagonizes the IL-7-dependent regulation of >3,000 genes, many of which are up- or down-regulated between fractions C' and D. Affected genes include those important for survival, metabolism, B cell signaling, and function, as well as transcriptional regulators like Ebf1, Pax5, and the Foxo1 family. Our data thus identify Ikaros as a central regulator of IL-7 signaling and pre-B cell development.
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Mice lacking IKZF1 have a complete block in B-cell differentiation at the pre-pro-B-cell stage.
“mice lacking IKZF1 have a complete block in B-cell differentiation at the pre-pro-B-cell stage.47”
From Bruton tyrosine kinase degradation as a therapeutic strategy for cancer (2019) · cites this paper as [47]
BTK is essential for normal B-cell development.
“Finally, BTK is essential for normal B-cell development”
From Bruton tyrosine kinase degradation as a therapeutic strategy for cancer (2019) · cites this paper as [47]
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Cites
Goodnow, C. C., Crosbie, J. C., Adelstein, S., Lavoie, T., Smith‐Gill, S. J., Brink, R. A., Pritchard-Briscoe, H., Wotherspoon, J. S., Loblay, R. H., Raphael, K., et al. (1988) · Nature · doi:10.1038/334676a0 · Cited by 1,568 · see citing works
Massive Cell Death of Immature Hematopoietic Cells and Neurons in Bcl-x-Deficient Mice
Motoyama, N., Wang, F., Roth, K. A., Sawa, H., Nakayama, K., Nakayama, K., Negishi, I., Senju, S., Zhang, Q., Fujii, S., et al. (1995) · Science · doi:10.1126/science.7878471 · Cited by 1,164 · see citing works
BCR–ABL1 lymphoblastic leukaemia is characterized by the deletion of Ikaros
Mullighan, C. G., Miller, C. B., Radtke, I., Phillips, L. A., Dalton, J., Ma, J., White, D., Hughes, T. P., Le Beau, M. M., Pui, C.-H., et al. (2008) · Nature · doi:10.1038/nature06866 · Cited by 1,072 · see citing works
Eilers, M., & Eisenman, R. N. (2008) · Genes & Development · doi:10.1101/gad.1712408 · Cited by 927 · see citing works
B-cell biology and development
Pieper, K., Grimbacher, B., & Eibel, H. (2013) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2013.01.046 · Cited by 618 · see citing works
Wang, J., Nichogiannopoulou, A., Wu, L. J., Sun, L., Sharpe, A. H., Bigby, M. E., & Georgopoulos, K. (1996) · Immunity · doi:10.1016/s1074-7613(00)80269-1 · Cited by 614 · see citing works
Testing gene function early in the B cell lineage in mb1-cre mice
Hobeika, E., Thiemann, S., Storch, B., Jumaa, H., Nielsen, P. J., Pelanda, R., & Reth, M. G. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0605944103 · Cited by 581 · see citing works
Harvey, R. C., Mullighan, C. G., Chen, I., Wharton, W., Mikhail, F. M., Carroll, A. J., Kang, H., Liu, W., Dobbin, K. K., Smith, M. A., et al. (2010) · Blood · doi:10.1182/blood-2009-09-245944 · Cited by 568 · see citing works
Pax5 induces V -to- DJ rearrangements and locus contraction of the immunoglobulin heavy-chain genePreprint
Fuxa, M., Skok, J. A., Souabni, A., Salvagiotto, G., Roldán, E., & Busslinger, M. (2004) · Genes & Development · doi:10.1101/gad.291504 · Cited by 414 · see citing works
Regulation of B-cell proliferation and differentiation by pre-B-cell receptor signalling
Herzog, S., Reth, M. G., & Jumaa, H. (2009) · Nature reviews. Immunology · doi:10.1038/nri2491 · Cited by 357 · see citing works
Amin, R. H., & Schlissel, M. S. (2008) · Nature Immunology · doi:10.1038/ni.1612 · Cited by 287 · see citing works
IRF-4,8 orchestrate the pre-B-to-B transition in lymphocyte developmentPreprint
Lu, R., Medina, K. L., Lancki, D. W., & Singh, H. (2003) · Genes & Development · doi:10.1101/gad.1104803 · Cited by 275 · see citing works
Malin, S., McManus, S., Cobaleda, C., Novatchkova, M., Delogu, A., Bouillet, P., Strasser, A., & Busslinger, M. (2009) · Nature Immunology · doi:10.1038/ni.1827 · Cited by 269 · see citing works
Regulation of B cell fate commitment and immunoglobulin heavy-chain gene rearrangements by Ikaros
Reynaud, D., Demarco, I. A., Reddy, K. L., Schjerven, H., Bertolino, E., Chen, Z., Smale, S. T., Winandy, S., & Singh, H. (2008) · Nature Immunology · doi:10.1038/ni.1626 · Cited by 261 · see citing works
Corfe, S. A., & Paige, C. J. (2012) · Seminars in Immunology · doi:10.1016/j.smim.2012.02.001 · Cited by 211 · see citing works
Thompson, E. C., Cobb, B. S., Sabbattini, P. M. R., Meixlsperger, S., Parelho, V., Liberg, D., Taylor, B., Dillon, N., Georgopoulos, K., Jumaa, H., et al. (2007) · Immunity · doi:10.1016/j.immuni.2007.02.010 · Cited by 203 · see citing works
Verkaik, N. S., Esveldt, R. E., van Heemst, D., Brüggenwirth, H. T., Hoeijmakers, J. H. J., Zdzienicka, M. Z., & van Gent, D. C. (2002) · European Journal of Immunology · doi:10.1002/1521-4141(200203)32:3 · Cited by 189 · see citing works
Mandal, M., Powers, S. E., Maienschein‐Cline, M., Bartom, E. T., Hamel, K. M., Kee, B. L., Dinner, A. R., & Clark, M. R. (2011) · Nature Immunology · doi:10.1038/ni.2136 · Cited by 187 · see citing works
SLP-65 regulates immunoglobulin light chain gene recombination through the PI(3)K-PKB-Foxo pathway
Herzog, S., Hug, E., Meixlsperger, S., Paik, J.-H., DePinho, R. A., Reth, M. G., & Jumaa, H. (2008) · Nature Immunology · doi:10.1038/ni.1616 · Cited by 154 · see citing works
Sabbattini, P. M. R., Lundgren, M., Georgiou, A., Chow, C.-M., Warnes, G., & Dillon, N. (2001) · The EMBO Journal · doi:10.1093/emboj/20.11.2812 · Cited by 147 · see citing works
Ikaros and Aiolos Inhibit Pre-B-Cell Proliferation by Directly Suppressing c-Myc Expression
Ma, S., Pathak, S., Mandal, M., Trinh, L., Clark, M. R., & Lu, R. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.00224-10 · Cited by 138 · see citing works
Trageser, D., Iacobucci, I., Nahar, R. R., et al. (2009) · The Journal of Experimental Medicine · doi:10.1084/jem.20090004 · Cited by 127 · see citing works
Ferreirós-Vidal, I., Carroll, T., Taylor, B., Terry, A. V., Liang, Z., Bruno, L., Dharmalingam, G., Khadayate, S. P., Cobb, B. S., Smale, S. T., et al. (2013) · Blood · doi:10.1182/blood-2012-08-450114 · Cited by 121 · see citing works
Ma, S., Pathak, S., Trinh, L. X., & Lu, R. (2007) · Blood · doi:10.1182/blood-2007-08-110106 · Cited by 117 · see citing works
Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros
Schjerven, H., McLaughlin, J., Arenzana, T. L., Frietze, S. E., Cheng, D., Wadsworth, S., Lawson, G. W., Bensinger, S. J., Farnham, P., Witte, O. N., et al. (2013) · Nature Immunology · doi:10.1038/ni.2707 · Cited by 102 · see citing works
Disruption of Fnip1 Reveals a Metabolic Checkpoint Controlling B Lymphocyte Development
Park, H., Staehling‐Hampton, K., Tsang, M., Appleby, M. W., Brunkow, M. E., Margineantu, D. H., Hockenbery, D. M., Habib, T., Liggitt, D., Carlson, G. A., et al. (2012) · Immunity · doi:10.1016/j.immuni.2012.02.019 · Cited by 89 · see citing works
Baba, M., Keller, J. R., Sun, H., et al. (2012) · Blood · doi:10.1182/blood-2012-02-410407 · Cited by 71 · see citing works
FoxO1 induces Ikaros splicing to promote immunoglobulin gene recombination
Alkhatib, A., Werner, M., Hug, E., Herzog, S., Eschbach, C., Faraidun, H., Köhler, F., Wossning, T., & Jumaa, H. (2012) · The Journal of Experimental Medicine · doi:10.1084/jem.20110216 · Cited by 64 · see citing works
Biclonal and biallelic deletions occur in 20% of B-ALL cases with IKZF1 mutations
Dupuis, A., Gaub, M. P., Legrain, M., Drénou, B., Mauvieux, L., Lutz, P., Herbrecht, R., Chan, S. H., & Kastner, P. (2012) · Leukemia · doi:10.1038/leu.2012.204 · Cited by 62 · see citing works
Self-citationUckun, F. M., Ma, H., Zhang, J., Özer, Z., Dovat, S., Mao, C., Ishkhanian, R., Goodman, P. A., & Qazi, S. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1209828109 · Cited by 61 · see citing works
Function of Ikaros as a tumor suppressor in B cell acute lymphoblastic leukemia.
Kastner, P., Dupuis, A., Gaub, M., Herbrecht, R., Lutz, P., & Chan, S. H. (2013) · Europe PMC (PubMed Central) · Cited by 60 · see citing works
Self-citationWinkler, T. H., Melchers, F., & Rolink, A. (1995) · Blood · doi:10.1182/blood.v85.8.2045.bloodjournal8582045 · Cited by 59 · see citing works
Leukemia-initiating cell activity requires calcineurin in T-cell acute lymphoblastic leukemia
Gachet, S., Genescà, E., Passaro, D., et al. (2013) · Leukemia · doi:10.1038/leu.2013.156 · Cited by 52 · see citing works
Gadd45β is a pro-survival factor associated with stress-resistant tumors
Engelmann, A., Speidel, D., Bornkamm, G. W., Deppert, W., & Stocking, C. (2007) · Oncogene · doi:10.1038/sj.onc.1210772 · Cited by 34 · see citing works
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Bruton tyrosine kinase degradation as a therapeutic strategy for cancer
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- Authors
- Heizmann, B., Kastner, P., & Chan, S.
- Affiliations
- Centre National de la Recherche Scientifique (FR)
- Corresponding author
- Kastner, Philippe
- Chan, Susan
- Venue
- Journal of Experimental Medicine
- Publisher
- Rockefeller University Press
- Published
- 2013-12-02
- Volume
- 210
- Issue
- 13
- Pages
- 2823-2832
- ISSN
- 0022-1007 (ISSN-L)
- 1540-9538
- PMC
- PMC3865471
- OpenAlex
- W2136858141
- Cited by
- 101
- References
- 34
- Citations by year
- 2026: 6 · 2025: 6 · 2024: 5 · 2023: 8 · 2022: 5 · 2021: 6 · 2020: 8 · 2019: 7 · 2018: 6 · 2017: 18 · 2016: 9 · 2015: 5 · 2014: 12
- FWCI
- 4.80
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- The Journal of Experimental Medicine (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion, cc-by-nc-sa)
- PubMed Central (publishedVersion, cc-by-nc-sa)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- Funders
- Agence Nationale de la Recherche (ANR-11-BSV3-018, ANR-11-BSV3-0018)
- Institut National de la Santé et de la Recherche Médicale
- Université de Strasbourg
- Fondation ARC pour la Recherche sur le Cancer
- Ligue Contre le Cancer
- Centre National de la Recherche Scientifique
- Institut National Du Cancer
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Keywords
- Ikaros, pre-B cell differentiation, IL-7 signaling, pre-B cell receptor signaling, B cell development, transcriptional regulation, EBF1, PAX5, FOXO1
- MeSH terms
- Animals, B-Lymphocytes, Cell Differentiation, Cell Separation, Flow Cytometry, Immunoglobulin kappa-Chains, Immunoglobulin lambda-Chains, Leukemia, Mutation, Phenotype, Recombination, Genetic, Retroviridae, Transcription, Genetic, Signal Transduction, Down-Regulation, Interleukin-7, Mice, Knockout, VDJ Recombinases, Mice, Ikaros Transcription Factor, Transcriptome
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