The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
Open accessAbstract
Summary: We present here Blast2GO (B2G), a research tool designed with the main purpose of enabling Gene Ontology (GO) based data mining on sequence data for which no GO annotation is yet available. B2G joints in one application GO annotation based on similarity searches with statistical analysis and highlighted visualization on directed acyclic graphs. This tool offers a suitable platform for functional genomics research in non-model species. B2G is an intuitive and interactive desktop application that allows monitoring and comprehension of the whole annotation and analysis process. Availability: Blast2GO is freely available via Java Web Start at http://www.blast2go.de Supplementary material: http://www.blast2go.de -> Evaluation Contact: aconesa@ivia.es; stefang@fis.upv.es
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Cites
Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
Gene Ontology: tool for the unification of biology
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics · doi:10.1038/75556 · Cited by 43,206
Research works printed but not linked: 6
- Al-Shahrour, F., et al. 2004FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes. Bioinformatics20578–580 · DOI · Paper page
- Blüthgen, N., Brand, K., Cajavec, B., Swat, M., Herzel, H., Beule, D. 2004Biological Profiling of Gene Groups utilizing Gene Ontology – A Statistical Framework. arXiv:q-bio.GN/040703411
- Doniger, S., et al. 2003MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data. Genome Biol.4R7 · DOI
- Groth, D., et al. 2004GOblet: a platform for Gene Ontology annotation of anonymous sequence data. Nucleic Acids Res.32313–317 · DOI
- Martin, D., et al. 2004GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes. BMC Bioinformatics5178 · DOI · Paper page
- Zehetner, G. 2003OntoBlast function: from sequence similarities directly to potential functional annotations by ontology terms. Nucleic Acids Res.313799–3803 · DOI
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Self-citationPhylogenomics resolves the timing and pattern of insect evolution
Misof, B., Liu, S., Meusemann, K., Peters, R. S., Donath, A., Mayer, C., Frandsen, P. B., Ware, J., Flouri, T., Beutel, R. G., et al. (2014) · Science · doi:10.1126/science.1257570 · Cited by 2,694
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Du, Z., Zhou, X., Ling, Y., Zhang, Z., & Su, Z. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq310 · Cited by 2,396
A large-scale evaluation of computational protein function prediction
Radivojac, P., Clark, W. T., Oron, T. R., Schnoes, A. M., Wittkop, T., Sokolov, A., Graim, K., Funk, C., Verspoor, K., Ben-Hur, A., et al. (2013) · Nature Methods · doi:10.1038/nmeth.2340 · Cited by 1,028
Individual intestinal symbionts induce a distinct population of RORγ + regulatory T cells
Sefik, E., Geva-Zatorsky, N., Oh, S., Konnikova, L., Zemmour, D., McGuire, A. M., Burzyn, D., Ortiz-Lopez, A., Lobera, M., Yang, J., et al. (2015) · Science · doi:10.1126/science.aaa9420 · Cited by 879
Metadata
- Authors
- Conesa, A., Götz, S., García-Gómez, J. M., Terol, J., Talón, M., & Robles, M.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2005-08-04
- Volume
- 21
- Issue
- 18
- Pages
- 3674-3676
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2164154943
- Cited by
- 11,495
- References
- 2
- FWCI
- 15.90
- Type
- journal article
- Language
- en
- Open access
- bronze
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