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adegenet: a R package for the multivariate analysis of genetic markers

Jombart, Thibaut·2008·Bioinformatics
DOI 10.1093/bioinformatics/btn129
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Abstract

Summary: The package adegenet for the R software is dedicated to the multivariate analysis of genetic markers. It extends the ade4 package of multivariate methods by implementing formal classes and functions to manipulate and analyse genetic markers. Data can be imported from common population genetics software and exported to other software and R packages. adegenet also implements standard population genetics tools along with more original approaches for spatial genetics and hybridization. Availability: Stable version is available from CRAN: http://cran.r-project.org/mirrors.html. Development version is available from adegenet website: http://adegenet.r-forge.r-project.org/. Both versions can be installed directly from R. adegenet is distributed under the GNU General Public Licence (v.2). Contact: jombart@biomserv.univ-lyon1.fr Supplementary information: Supplementary data are available at Bioinformatics online.

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Research works printed but not linked: 14

  1. Chessel, 2004, The ade4 package-I-one-table methods, R News, 4, 5
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Metadata

Authors
Jombart, T.
Venue
Bioinformatics
Publisher
Oxford University Press (OUP)
Published
2008-04-08
Volume
24
Issue
11
Pages
1403-1405
ISSN
  • 1367-4803 (ISSN-L)
  • 1367-4811
DOI
10.1093/bioinformatics/btn129
OpenAlex
W2146290595
Cited by
8,107
References
0
FWCI
18.28
Type
journal article
Language
en
Open access
closed

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CoChat. (2026). Citation check: adegenet: a R package for the multivariate analysis of genetic markers. https://app.cochat.ai/papers/10.1093/bioinformatics/btn129
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Jombart, T. (2008). adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics. https://doi.org/10.1093/bioinformatics/btn129

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