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The controlling role of ATM in homologous recombinational repair of DNA damage
Open accessAbstract
The human genetic disorder ataxia telangiectasia (A-T), caused by mutation in the ATM gene, is characterized by chromosomal instability, radiosensitivity and defective cell cycle checkpoint activation. DNA double-strand breaks (dsbs) persist in A-T cells after irradiation, but the underlying defect is unclear. To investigate ATM's interactions with dsb repair pathways, we disrupted ATM along with other genes involved in the principal, complementary dsb repair pathways of homologous recombination (HR) or non-homologous end-joining (NHEJ) in chicken DT40 cells. ATM(-/-) cells show altered kinetics of radiation-induced Rad51 and Rad54 focus formation. Ku70-deficient (NHEJ(-)) ATM(-/-) chicken DT40 cells show radiosensitivity and high radiation-induced chromosomal aberration frequencies, while Rad54-defective (HR(-)) ATM(-/-) cells show only slightly elevated aberration levels after irradiation, placing ATM and HR on the same pathway. These results reveal that ATM defects impair HR-mediated dsb repair and may link cell cycle checkpoints to HR activation.
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“Both homologous recombination and nonhomologous end-joining pathways of double-strand break repair have been shown to be modulated by the ATM-and Chk2-dependent checkpoint (23)(24)(25).”
From Phosphorylation of Nucleotide Excision Repair Factor Xeroderma Pigmentosum Group A by Ataxia Telangiectasia Mutated and Rad3-Related–Dependent Checkpoint Pathway Promotes Cell Survival in Response to UV Irradiation (2006) · cites this paper as [24]
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Items 101–200 of 313
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ATM Mutations in Sporadic Lymphoid Tumours
Stanković, T., Stewart, G. S., Byrd, P. J., Fegan, C., Moss, P. A. H., & Taylor, A. M. R. (2002) · Leukemia & lymphoma/Leukemia and lymphoma · doi:10.1080/1042819021000002884 · Cited by 82
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“…Netherlands m.vugt@umcg.nl Specialty section: This article was submitted to Cancer Genetics, a section of the journal Frontiers in Genetics Received: 14 January 2015 Paper pending published: 03 February 2015 Accepted: 23 February 2015 Published: 20 March 2015 Citation: Krajewska M, Fehrmann RSN, de”
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“reverse genetics failed to see potentiation in cell death arising from the conditional loss of RAD54 in ATM / cells, suggesting an inherent HR defect in ATM / cells (46).”
BackgroundATM‐dependent DNA damage surveillance in T‐cell development and leukemogenesis: the DSB connection
Matei, I. R., Guidos, C. J., & Danska, J. S. (2006) · Immunological Reviews · doi:10.1111/j.0105-2896.2006.00361.x · Cited by 77
“An alternative but not exclusive explanation, supported by several in vitro studies, is that ATM is directly involved in HR (93).”
BackgroundAnalysis of DNA double-strand break repair pathways in mice
Brugmans, L., Kanaar, R., & Essers, J. (2006) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2006.01.022 · Cited by 74
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“:3) astrocytes were also included as an additional control as they had been reported to be defective in HR (Morrison et al , 2000), although recent data (Kass et al , 2013; Rass et al , 2013), and our current data (Fig 5), show that they are not HR deficient.”
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“ATM promotes the HR-mediated repair of DSBs in various systems, including in DT40 chicken cells in response to IR (16) and in Chinese hamster cells in response to inhibition of poly(adenosine diphosphate ribose) polymerase (PARP) (17).”
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“…indicates that all the IR resistance conferred by Dot1p depends on Rad9p, but on the basis of our data and that of others (Bashkirov et al. 2000; Morrison et al. 2000), RAD9 itself may perhaps be considered a player in HRR as well as a checkpoint gene, since rad9D strains in our hands are as…”
BackgroundClastogenicity of the fungicide afugan in cultured human lymphocytes
Yüzbaşıoğlu, D., Çelık, M., Yılmaz, S., Ünal, F. Ş., & Aksoy, H. (2006) · Mutation Research/Genetic Toxicology and Environmental Mutagenesis · doi:10.1016/j.mrgentox.2006.01.001 · Cited by 66
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“Whereas some studies have observed a role for ATM in HDR (17, 18), other studies have not (24–27).”
BackgroundChromium (VI) Activates Ataxia Telangiectasia Mutated (ATM) Protein
Ha, L., Ceryak, S. M., & Patierno, S. R. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m210560200 · Cited by 63
Loss of DNA Damage Response in Neuroblastoma and Utility of a PARP Inhibitor
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Up-regulation of microRNA-138 induce radiosensitization in lung cancer cells
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“Evidence suggests that ATM exerts genomic regulation primarily through HR [91].”
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Christian, B. A., Grever, M. R., Byrd, J. C., & Lin, T. S. (2007) · Current Opinion in Oncology · doi:10.1097/cco.0b013e3282efb9da · Cited by 55
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ATM dependent apoptosis in the nervous system
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“The Rad54–/–, Rad51–/– and Mre11–/– conditional cell lines contained human Rad54 or chicken Rad51 and Mre11 under control of a tetracycline (tet)-repressible promoter (28, 30 ,32).”
BackgroundTyrosine 370 phosphorylation of ATM positively regulates DNA damage response
Lee, H.-J., Lan, L., Peng, G., Chang, W., Hsu, M., Wang, Y., Cheng, C. C., Wei, L., Nakajima, S., Chang, S.-S., et al. (2015) · Cell Research · doi:10.1038/cr.2015.8 · Cited by 57
“To further determine whether EGFR is involved in ATM-mediated homologous recombination repair (Iijima et al., 2008; Morrison et al., 2000), we generated control and EGFR-depleted U2OS cells integrated with DRGFP reporter (Figure 7A) (Peng et al.”
MethodRoles of Vertebrate Smc5 in Sister Chromatid Cohesion and Homologous Recombinational Repair
Stephan, A. K., Kliszczak, M., Dodson, H., Cooley, C., & Morrison, C. G. (2011) · Molecular and Cellular Biology · doi:10.1128/mcb.00786-10 · Cited by 51
“Rad54 (32), anti-chicken Smc1 8232 and anti-chicken Scc1 2110 at 1:1000, af-”
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“ATM-/Chicken DT40 NEOR, PUROR Checkpoint control [46]”
Self-citationReverse genetic studies of homologous DNA recombination using the chicken B–lymphocyte line, DT40
Sonoda, E., Morrison, C. G., Yamashita, Y. M., Takata, M., & Takeda, S. (2001) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2000.0755 · Cited by 51
Self-citationCollaborative roles of γH2AX and the Rad51 paralog Xrcc3 in homologous recombinational repair
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Self-citationATM deficiency disrupts Tcra locus integrity and the maturation of CD4+CD8+ thymocytes
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Critical Roles for Polymerase ζ in Cellular Tolerance to Nitric Oxide–Induced DNA Damage
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“Such marked divergence in the extent of G2 arrest among individual cells was not found following other genotoxic stressors such as ionizing radiation (36).”
BackgroundInfluentialSelf-citationThe WRN and MUS81 proteins limit cell death and genome instability following oncogene activation
Murfuni, I., Nicolai, S., Baldari, S., Crescenzi, M., Bignami, M., Franchitto, A., & Pichierri, P. (2012) · Oncogene · doi:10.1038/onc.2012.80 · Cited by 48
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Loss of atm sensitises p53-deficient cells to topoisomerase poisons and antimetabolites
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“It serves a surveillance function that helps maintain genomic integrity by promoting cell cycle arrest and damage repair, and possibly by recruiting repair proteins to the site of damage to prevent double-strand break repair from entering an error-prone pathway [10].”
BackgroundXue, L., Yu, D. S., Furusawa, Y., Okayasu, R., Tong, J., Cao, J., & Fan, S. (2009) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2009.06.016 · Cited by 45
“decreased and delayed formation of Rad51 foci-containing nuclei is observed in AT cells upon radiation, a finding which reveals that ATM is also a major player in the HRR pathway [12–14].”
BackgroundKobayashi, M., Hirano, A., Kumano, T., Xiang, S., Mihara, K. L., Haseda, Y., Matsui, O., Shimizu, H., & Yamamoto, K. (2004) · Genes to Cells · doi:10.1111/j.1356-9597.2004.00728.x · Cited by 45
“These results are also consistent with those derived from radiation sensitivity analysis: while ATM−/− DT40 cells were highly X-ray sensitive, as we reported previously (Morrison et al. 2000; Takao et al. 1999, 2000), Rad17−/− and Rad9−/− cells were only moderately sensitive to X-rays (Fig.”
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Self-citationInhibition of DNA repair by Pentoxifylline and related methylxanthine derivatives
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“[62] C.”
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“Furthermore, both NHEJ and HEJ repair pathways are found to be defective in the absence of ATM.(9,10) The precise mechanism of DNA repair regulation by ATM, however, is yet to be elucidated.”
BackgroundInfluentialSlebos, R. J. C., & Taylor, J. A. (2001) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.2001.4335 · Cited by 39
Trifluorothymidine exhibits potent antitumor activity via the induction of DNA double-strand breaks
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“Furthermore, the ATM signals induce the association of homologous recombination repair components, such as Rad51, Xrcc3, BRCA2 and H2AX (22,23).”
Dębiak, M., Nikolova, T., & Kaina, B. (2004) · DNA repair · doi:10.1016/j.dnarep.2003.11.013 · Cited by 39
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“Results published previously strongly support the link between ATM and HRR (51, 52), suggesting that ATM is an NHEJ-independent checkpoint regulator.”
BackgroundPhenotypic effects of heterozygosity for a BRCA2 mutation
Warren, M. V. (2003) · Human Molecular Genetics · doi:10.1093/hmg/ddg277 · Cited by 37
Checkpoint and DNA-repair proteins are associated with the cores of mammalian meiotic chromosomes
Tarsounas, M., & Møens, P. B. (2001) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/s0070-2153(01)51004-2 · Cited by 36
Sah, N. K., Munshi, A., Nishikawa, T., Mukhopadhyay, T., Roth, J. A., & Meyn, R. E. (2003) · PubMed · Cited by 35
Targeting ATM-deficient CLL through interference with DNA repair pathways
Knittel, G., Liedgens, P., & Reinhardt, H. C. (2015) · Frontiers in Genetics · doi:10.3389/fgene.2015.00207 · Cited by 34
“…DNA repair, specifically HR-mediated DSB repair, with a less well-characterized role in NHEJ (Luo et al., 1996; Dar et al., 1997; Chen et al., 1999; Morrison et al., 2000; Yuan et al., 2003; Kuhne et al., 2004; Riballo et al., 2004; Xie et al., 2004; Frontiers in Genetics | www.frontiersin.org 3…”
BackgroundInfluentialLevel of cdk5 expression predicts the survival of relapsed multiple myeloma patients
Levacque, Z., Rosales, J. L., & Lee, K. (2012) · Cell Cycle · doi:10.4161/cc.21886 · Cited by 33
NUCKS1 promotes RAD54 activity in homologous recombination DNA repair
Maranon, D. G., Sharma, N., Huang, Y., Selemenakis, P., Wang, M., Altina, N. H., Zhao, W., & Wiese, C. (2020) · The Journal of Cell Biology · doi:10.1083/jcb.201911049 · Cited by 30
A miR-590/Acvr2a/Rad51b Axis Regulates DNA Damage Repair during mESC Proliferation
Liu, Q., Wang, G., Chen, Y., Li, G., Yang, D., & Kang, J. (2014) · Stem Cell Reports · doi:10.1016/j.stemcr.2014.10.006 · Cited by 31
“During HRR, DSB damage repair uses a template containing hundreds of base pairs of sequence homology, and usually the sister chromatids are available to serve as templates (Haber, 2000; Morrison et al., 2000; Takata et al., 1998).”
BackgroundCaspase cleavage of transcription factor Sp1 enhances apoptosis
Torabi, B., Flashner, S. P., Beishline, K., Sowash, A., Donovan, K., Bassett, G., & Azizkhan‐Clifford, J. (2017) · APOPTOSIS · doi:10.1007/s10495-017-1437-4 · Cited by 31
Deubiquitinase USP47-stabilized splicing factor IK regulates the splicing of ATM pre-mRNA
Ka, H. I., Lee, S., Han, S., Jeong, A. L., Park, J. Y., Joo, H. J., Soh, S., Park, D., & Yang, Y. D. (2020) · Cell Death Discovery · doi:10.1038/s41420-020-0268-1 · Cited by 30
Timoroğlu, İ., Yüzbaşıoğlu, D., Ünal, F., Yılmaz, S., Aksoy, H., & Çelık, M. (2012) · Environmental Toxicology · doi:10.1002/tox.21783 · Cited by 30
“Clastogenic agents may induce DNA double-strand breaks and lead to either cellcycle arrest or apoptosis by a mechanism that includes activation of the TP53 and p21 proteins (Kastan et al., 1991; Bunz et al., 1998; Rotman and Shiloh, 1998; Morrison et al., 2000, Obe and Durante, 2010).”
BackgroundOrsburn, B. C., Escudero, B., Prakash, M., Gesheva, S. I., Liu, G., Huso, D. L., & Franco, S. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.00091-10 · Cited by 34
“However, ATM may also facilitate HR via H2AX-independent mechanisms, including activation of cell cycle checkpoints and endprocessing activities (5, 33, 48).”
BackgroundLiu, X., Wang, Y., Benaissa, S., Matsuda, A., Kantarjian, H. M., Estrov, Z. E., & Plunkett, W. K. (2010) · Blood · doi:10.1182/blood-2009-05-220376 · Cited by 28
Targeting DNA Repair Proteins: A Promising Avenue for Cancer Gene Therapy
Belzile, J.-P., Choudhury, S. A., Cournoyer, D., & Chow, T. Y.-K. (2006) · Current Gene Therapy · doi:10.2174/156652306775515538 · Cited by 28
“It is generally agreed that HRR plays a more prominent role in late S and G2 stages of the cell cycle when sister chromatids are available for homologous pairing [Haber, 2000;Morrison et al., 2000], whereas the majority of DSBs are rejoined by NHEJ in G1/G0 and early S stages [Lee et al.”
BackgroundInhibition of novel GCN5–ATM axis restricts the onset of acquired drug resistance in leukemia
Salunkhe, S. J., Mishra, S. V., Nair, J., Ghosh, S., Choudhary, N., Kaur, E., Shah, S. G., Patkar, K., Anand, D., Khattry, N., et al. (2018) · International Journal of Cancer · doi:10.1002/ijc.31242 · Cited by 29
“3a), these data are in agreement with previous reports where ATM is shown to prefer resolution of DNA DSBs via HR pathway.(22)”
ResultTatfi, M., Hermine, O., & Suárez, F. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2018.03060 · Cited by 28
“The repair mechanism involves non-homologous end joining, an error-prone process occurring in G1/S phase (19), or homologous recombination, a faithful process in G2/M when sister chromatid is available (20).”
BackgroundA role for Xrcc2 in the early stages of mouse development
Adam, J., Deans, B., & Thacker, J. (2006) · DNA repair · doi:10.1016/j.dnarep.2006.10.024 · Cited by 26
Ku affects the ATM-dependent S phase checkpoint following ionizing radiation
Zhou, X.-Y., Wang, X., Wang, H., Chen, D. J., Li, G. C., Iliakis, G. E., & Wang, Y. (2002) · Oncogene · doi:10.1038/sj.onc.1205782 · Cited by 27
“…telangiectasia (AT) cells of which ATM is mutant showed deficient fast response of S checkpoint (Painter and Young, 1980; Xu et al., 2001; Zhou et al., 2002) as well as abnormal G1 and G2 checkpoint responses and deficient DNA homologous recombination (HR) repair (Morrison et al., 2000) after IR.”
BackgroundA nervous predisposition to unrepaired DNA double strand breaks
Reynolds, J. J., & Stewart, G. S. (2013) · DNA Repair · doi:10.1016/j.dnarep.2013.04.011 · Cited by 26
“However, it has been proposed that the slow’ component of DSB repair is mediated by the HRR machinry, suggesting that HRR functions to repair DSBs in regions of eterochromatin.”
BackgroundInfluentialHorn, S., Brady, D., & Prise, K. M. (2015) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2015.06.010 · Cited by 29
“ATMs role appears to be more subtle, with suggestions that this kinase is involved in the repair of DSBs that require re-sectioning and those breaks lying within heterochromatic regions [28, 29], along with its critical role in DNA damage signalling [30] and apoptosis [31].”
BackgroundYoshida, M., Hosoi, Y., Miyachi, H., Ishii, N., Matsumoto, Y., Enomoto, A., Nakagawa, K., Yamada, S., Suzuki, N., & Ono, T. (2002) · International Journal of Radiation Biology · doi:10.1080/095530002317577321 · Cited by 26
“After the hydroxyurea treatment, cells were washed with phos-1998, Chen et al. 1999, Cortez et al. 1999, Morrison et al. 2000) .”
BackgroundMethodLiu, X., Kantarjian, H. M., & Plunkett, W. K. (2012) · Expert Opinion on Investigational Drugs · doi:10.1517/13543784.2012.660249 · Cited by 25
“The NHEJ pathway is dependent on DNA-PK [33], where as HR is initiated by ATM [34,35].”
BackgroundDodson, H., & Morrison, C. G. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp684 · Cited by 26
“Wild type, Ku70 / (23), ATM / (24) and H2AX / (25) clones of the chicken lymphoma B-cell line DT40 were cultured as described (23).”
InfluentialSelf-citationLien, W., Chen, T., Sheu, S., Lin, T., Kang, F., Yu, C., Kuan, T., Huang, B., & Wang, C. (2017) · Journal of Cellular Biochemistry · doi:10.1002/jcb.26652 · Cited by 25
“Among these proteins, ATM, which belongs to the superfamily of phosphatidylinositol 3-kinase-related kinases, participates in the repair of DNA double-strand breaks via homologous recombination.(9,10) In the presence of DNA double-strand breaks, ATM is activated and phosphorylated at Ser1981, thus activating the downs…”
Kulkarni, R. M., Thomas, R. A., & Tucker, J. D. (2010) · Environmental and Molecular Mutagenesis · doi:10.1002/em.20605 · Cited by 24
“It is generally believed that during late S phase and in G2 phase of the cell cycle, HRR plays a more prominent role, whereas NHEJ predominates during G1 and early S phases [Lee et al., 1997; Takata et al., 1998; Haber, 2000; Morrison et al., 2000; Wu et al., 2008].”
BackgroundFernando, M., Duijf, P. H. G., Proctor, M. A., Stevenson, A. J., Ehmann, A., Vora, S., Škalamera, D., Adams, M. N., & Gabrielli, B. G. (2021) · Oncogenesis · doi:10.1038/s41389-021-00329-8 · Cited by 25
Mammalian meiosis involves DNA double-strand breaks with 3′ overhangs
Zenvirth, D., Richler, C., Bardhan, A., Baudat, F., Barzilai, A., Wahrman, J., & Simchen, G. (2003) · Chromosoma · doi:10.1007/s00412-002-0223-3 · Cited by 23
Atencio, D. P., Iannuzzi, C. M., Green, S., Stock, R. G., Bernstein, J. L., & Rosenstein, B. S. (2001) · Environmental and Molecular Mutagenesis · doi:10.1002/em.1072 · Cited by 23
“…Kharbanda et al., 1996] and NF-kB [Lee et al., 1998; Piret et al., 1999; Li et al., 2001] as well as BRCA1 [Gatei et al., 2000; Cortez et al., 1999], all of which are involved in DNA surveillance and repair (both homologous and nonhomologous) processes [Morrison et al., 2000; Kanaar et al., 1998].”
Metadata
- Authors
- Morrison, C., Sonoda, E., Takao, N., Shinohara, A., Yamamoto, K., & Takeda, S.
- Affiliations
- Kyoto University (JP)
- Kanazawa University (JP)
- University of Chicago (US)
- Corresponding author
- Takeda, Shunichi
- ORCID
- Morrison, Ciaran
- Venue
- The EMBO Journal
- Published
- 2000-02-01
- Volume
- 19
- Issue
- 3
- Pages
- 463-471
- ISSN
- 0261-4189 (ISSN-L)
- 1460-2075
- PMC
- PMC305583
- OpenAlex
- W2017297714
- Cited by
- 312
- References
- 76
- Citations by year
- 2026: 6 · 2025: 1 · 2024: 10 · 2023: 2 · 2022: 8 · 2021: 6 · 2020: 9 · 2019: 8 · 2018: 9 · 2017: 9 · 2016: 1 · 2015: 12 · 2014: 9 · 2013: 8 · 2012: 15
- FWCI
- 10.74
- Type
- journal article
- Language
- en
- Update notices
- erratum (2000-02-15)
- Open access
- bronze
- doi.org
- Locations
- The EMBO Journal (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Wellcome Trust
- QIMR Berghofer Medical Research Institute
- University of Cambridge
- University of Sussex
- Mochida Memorial Foundation for Medical and Pharmaceutical Research
- Bayer Yakuhin
- Medical Research Council
- Japan Society for the Promotion of Science (CREST)
- Core Research for Evolutional Science and Technology
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Effects of Radiation Exposure
- Health Sciences › Medicine › Oncology › PARP inhibition in cancer therapy
- Keywords
- ATM kinase, ataxia telangiectasia, homologous recombination, non-homologous end joining, DNA double-strand break repair, radiosensitivity, chromosomal instability, cell cycle checkpoints, RAD51, Rad54, Ku70, DT40 cells, chromosomal abnormalities
- MeSH terms
- Ku Autoantigen, Animals, Ataxia Telangiectasia, Cell Division, Cell Line, Chickens, Chromosome Aberrations, DNA Damage, DNA Repair, DNA Helicases, DNA-Binding Proteins, Fluorescent Antibody Technique, Fungal Proteins, Humans, Nuclear Proteins, Radiation Tolerance, Recombination, Genetic, Immunoblotting, Protein Serine-Threonine Kinases, Gene Targeting, Cell Cycle Proteins, Tumor Suppressor Proteins, Saccharomyces cerevisiae Proteins, Avian Proteins, Antigens, Nuclear, DNA Repair Enzymes, Rad51 Recombinase, Ataxia Telangiectasia Mutated Proteins
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