Schizosaccharomyces pombe Ppr10 is required for mitochondrial translation
Abstract
The mitochondrial genome encodes key components of the oxidative phosphorylation (OXPHOS) system, whose expression is essential for mitochondrial functions. We have previously shown that deletion of the Schizosaccharomyces pombe ppr10 encoding a pentatricopeptide repeat protein severely reduces the mature levels of intron-containing mitochondrial transcripts cox1 and cob1, and severely impairs mitochondrial translation. In this study, we examined the possibility that the reduced levels of Cox1 and Cob1 proteins in cells were due to lowered levels of cox1 and cob1 mRNAs. We found that deletion of ppr10 did not affect the levels of mature cox1 and cob1 mRNAs in a mitochondrial intronless background. However, synthesis of Cox1 and Cob1 proteins were still severely affected by deletion of ppr10 in a mitochondrial intronless background. Consistent with this, we found that deletion of mitochondrial introns could not rescue the respiratory growth defect of Δppr10 cells. Our results reveal that Ppr10 is not required for the stability of cox1 and cob1 mRNAs, and provide further support for the idea that Ppr10 plays a critical role in mitochondrial translation.
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SpPpr10p mediates the association of translation initiation factors SpMti2p, SpMti3p, and SpMpa1 with the small mitoribosome subunit.
“SpPpr10p was reported to mediate the association of translation initiation factors (SpMti2p, SpMti3p, and the SpMpa1 matrix protein) with the small mitoribosome subunit (mt-SSU) (Liu et al. 2020; Luo et al. 2021).”
From <i>Candida albicans</i> PPR proteins are required for the expression of respiratory Complex I subunits (2024) · cites this paper as Liu et al. 2020
Cites
The multifaceted contributions of mitochondria to cellular metabolism
Spinelli, J. B., & Haigis, M. C. (2018) · Nature Cell Biology · doi:10.1038/s41556-018-0124-1 · Cited by 1,935 · see citing works
Pentatricopeptide Repeat Proteins in Plants
Barkan, A., & Small, I. (2014) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-050213-040159 · Cited by 1,035 · see citing works
The role of mitochondria in metabolism and cell death
Vakifahmetoglu-Norberg, H., Ouchida, A. T., & Norberg, E. (2017) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2016.11.088 · Cited by 729 · see citing works
Mitochondria as signaling organelles
Chandel, N. S. (2014) · BMC Biology · doi:10.1186/1741-7007-12-34 · Cited by 576 · see citing works
Mechanisms of Mitochondrial Iron-Sulfur Protein Biogenesis
Lill, R., & Freibert, S.-A. (2020) · Annual Review of Biochemistry · doi:10.1146/annurev-biochem-013118-111540 · Cited by 453 · see citing works
Genomewide Analysis of mRNA Processing in Yeast Using Splicing-Specific Microarrays
Clark, T. A., Sugnet, C. W., & Ares, M. (2002) · Science · doi:10.1126/science.1069415 · Cited by 411 · see citing works
Structural basis for the modular recognition of single-stranded RNA by PPR proteins
Yin, P., Li, Q., Yan, C., Liu, Y., Liu, J., Yu, F., Wang, Z., Long, J., He, J., Wang, H., et al. (2013) · Nature · doi:10.1038/nature12651 · Cited by 338 · see citing works
de Longevialle, A. F., Meyer, E. H., Andrés, C., Taylor, N. L., Claire Lurin, A., Millar, A. H., & Small, I. (2007) · The Plant Cell · doi:10.1105/tpc.107.054841 · Cited by 276 · see citing works
Isolation of Yeast Mitochondria
Meisinger, C., Pfanner, N., & Truscott, K. N. (2005) · Humana Press eBooks · doi:10.1385/1-59259-958-3:033 · Cited by 270 · see citing works
An overview of pentatricopeptide repeat proteins and their applications
Manna, S. (2015) · Biochimie · doi:10.1016/j.biochi.2015.04.004 · Cited by 258 · see citing works
Yang, L., Zhang, J., He, J., Qin, Y., Hua, D., Duan, Y., Chen, Z., & Gong, Z. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004791 · Cited by 230 · see citing works
Mohr, G., Perlman, P. S., & Lambowitz, A. M. (1993) · Nucleic Acids Research · doi:10.1093/nar/21.22.4991 · Cited by 215 · see citing works
Liu, Y., He, J., Chen, Z., Ren, X., Hong, X., & Gong, Z. (2010) · The Plant Journal · doi:10.1111/j.1365-313x.2010.04280.x · Cited by 211 · see citing works
de Vries, S., & Marres, C. A. M. (1987) · Biochimica et Biophysica Acta (BBA) - Reviews on Bioenergetics · doi:10.1016/s0304-4173(87)80003-4 · Cited by 198 · see citing works
Delineation of pentatricopeptide repeat codes for target RNA prediction
Yan, J., Yao, Y., Hong, S., Yang, Y., Shen, C., Zhang, Q., Zhang, D., Zou, T., & Yin, P. (2019) · Nucleic Acids Research · doi:10.1093/nar/gkz075 · Cited by 149 · see citing works
Overkamp, K. M., Bakker, B. M., Kötter, P., van Tuijl, A., de Vries, S., van Dijken, J. P., & Pronk, J. T. (2000) · Journal of Bacteriology · doi:10.1128/jb.182.10.2823-2830.2000 · Cited by 147 · see citing works
Kopřivová, A., Francs‐Small, C. C. D., Calder, G. M., Mugford, S. T., Tanz, S. K., Lee, B., Zechmann, B., Small, I., & Kopřiva, S. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.147603 · Cited by 142 · see citing works
Mitochondrial One-Carbon Pathway Supports Cytosolic Folate Integrity in Cancer Cells
Zheng, Y., Lin, T.-Y., Lee, G., Paddock, M. N., Momb, J., Cheng, Z., Li, Q., Fei, D. L., Stein, B. D., Ramsamooj, S., et al. (2018) · Cell · doi:10.1016/j.cell.2018.09.041 · Cited by 106 · see citing works
Hsieh, W., Liao, J., Chang, C., Harrison, T., Boucher, C., & Hsieh, M. (2015) · PLANT PHYSIOLOGY · doi:10.1104/pp.15.00354 · Cited by 87 · see citing works
Colas des Francs-Small, C., Falcon de Longevialle, A., Li, Y., Lowe, E., Tanz, S. K., Smith, C., Bevan, M. W., & Small, I. (2014) · PLANT PHYSIOLOGY · doi:10.1104/pp.114.244616 · Cited by 81 · see citing works
Self-citationPPR proteins – orchestrators of organelle RNA metabolism
Rovira, A. G., & Smith, A. G. (2019) · Physiologia Plantarum · doi:10.1111/ppl.12950 · Cited by 74 · see citing works
Kühl, I., Dujeancourt, L., Gaisne, M., Herbert, C. J., & Bonnefoy, N. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkr511 · Cited by 58 · see citing works
Yeast PPR proteins, watchdogs of mitochondrial gene expression
Herbert, C. J., Golik, P., & Bonnefoy, N. (2013) · RNA Biology · doi:10.4161/rna.25392 · Cited by 54 · see citing works
Human pentatricopeptide proteins
Lightowlers, R., & Chrzanowska-Lightowlers, Z. (2013) · RNA Biology · doi:10.4161/rna.24770 · Cited by 47 · see citing works
Wang, C., Aubé, F., Quadrado, M., Dargel-Graffin, C., & Mireau, H. (2018) · Journal of Experimental Botany · doi:10.1093/jxb/ery275 · Cited by 44 · see citing works
Striking Diversity of Mitochondria-Specific Translation Processes across Eukaryotes
Waltz, F., & Giegé, P. (2019) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2019.10.004 · Cited by 43 · see citing works
Schäfer, B., Merlos-Lange, A. M., Anderl, C., Welser, F., Zimmer, M., & WOLF, K. W. (1991) · Molecular and General Genetics MGG · doi:10.1007/bf00282654 · Cited by 41 · see citing works
Pellenz, S., Harington, A., Dujon, B., WOLF, K. W., & Schäfer, B. (2002) · Journal of Molecular Evolution · doi:10.1007/s00239-001-2327-4 · Cited by 37 · see citing works
Wang, Y., Yan, J., Zhang, Q., Ma, X., Zhang, J., Su, M., Wang, X., & Huang, Y. (2017) · Nucleic Acids Research · doi:10.1093/nar/gkx127 · Cited by 34 · see citing works
A mitochondrial group-I intron in fission yeast encodes a maturase and is mobile in crosses
Schäfer, B., Wilde, B., Massardo, D. R., Manna, F., Giudice, L. D., & WOLF, K. W. (1994) · Current Genetics · doi:10.1007/bf00351487 · Cited by 32 · see citing works
Intraspecific Diversity of Fission Yeast Mitochondrial Genomes
Tao, Y., Suo, F., Tusso, S., Wang, Y., Huang, S. M., Wolf, J. B. W., & Du, L. (2019) · Genome Biology and Evolution · doi:10.1093/gbe/evz165 · Cited by 30 · see citing works
In Vivo Labeling and Analysis of Mitochondrial Translation Products in Budding and in Fission Yeasts
Gouget, K., Verde, F., & Barrientos, A. (2008) · Methods in molecular biology · doi:10.1007/978-1-59745-261-8_8 · Cited by 22 · see citing works
Schäfer, B., Gan, L., & Perlman, P. S. (2003) · Journal of Molecular Biology · doi:10.1016/s0022-2836(03)00441-8 · Cited by 19 · see citing works
Ostojić, J., Panozzo, C., Bourand-Plantefol, A., Herbert, C. J., Dujardin, G., & Bonnefoy, N. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkw490 · Cited by 16 · see citing works
The fission yeast Schizosaccharomyces pombe Mtf2 is required for mitochondrial cox1 gene expression
Liu, J., Li, Y., Chen, J., Wang, Y., Zou, M., Su, R., & Huang, Y. K. (2018) · Microbiology · doi:10.1099/mic.0.000602 · Cited by 8 · see citing works
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Dinh, N., & Bonnefoy, N. (2023) · IUBMB Life · doi:10.1002/iub.2801 · Cited by 14 · see citing works
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Luo, Y., Wang, Y., & Huang, Y. (2021) · Journal of Biological Chemistry · doi:10.1016/j.jbc.2021.100869 · Cited by 10 · see citing works
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Liu, Z., Ebrahim, A., Wu, X., Li, M., & Huang, Y. K. (2022) · Archives of Microbiology · doi:10.1007/s00203-022-02970-2 · Cited by 10 · see citing works
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Wang, Y., Luo, Y., & Huang, Y. K. (2022) · Yeast · doi:10.1002/yea.3813 · Cited by 5 · see citing works
Self-citationHu, Y., Luo, Y., Yin, D., Zhao, L., Wang, Y., Yao, R., Zhang, P., Wu, X., Li, M., Hidalgo, E., et al. (2022) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2022.106308 · Cited by 6 · see citing works
Self-citationWenda, J. M., Drzewicka, K., Mulica, P., Tetaud, E., di Rago, J. P., Golik, P., & Łabędzka-Dmoch, K. (2024) · GENETICS · doi:10.1093/genetics/iyae124 · Cited by 2 · see citing works
Wang, Y., Jin, T., & Huang, Y. K. (2024) · Journal of Biological Chemistry · doi:10.1016/j.jbc.2024.107176 · Cited by 1 · see citing works
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- Authors
- Liu, Z., Li, Y., Xie, W., & Huang, Y.
- Affiliations
- Nanjing Normal University (CN)
- Corresponding author
- Huang, Ying
- ORCID
- Venue
- FEMS Microbiology Letters
- Publisher
- Oxford University Press (OUP)
- Published
- 2020-10
- Volume
- 367
- Issue
- 19
- ISSN
- 0378-1097 (ISSN-L)
- 1574-6968
- OpenAlex
- W3092132433
- Cited by
- 10
- References
- 35
- Citations by year
- 2026: 2 · 2024: 3 · 2023: 1 · 2022: 3 · 2021: 1
- FWCI
- 0.41
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model (vor)
- Locations
- FEMS Microbiology Letters (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Science Foundation of China (31770810)
- Priority Academic Program Development of Jiangsu Higher Education Institutions
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Keywords
- pentatricopeptide repeat proteins, mitochondrial translation, Schizosaccharomyces pombe, mitochondrial COI, mitochondrial introns, mRNA stability, oxidative phosphorylation, mitochondrial genome
- MeSH terms
- Mitochondria, Schizosaccharomyces, Protein Biosynthesis, RNA-Binding Proteins, Schizosaccharomyces pombe Proteins
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