The multifaceted contributions of mitochondria to cellular metabolism
Open accessAbstract
Although classically appreciated for their role as the powerhouse of the cell, the metabolic functions of mitochondria reach far beyond bioenergetics. In this Review, we discuss how mitochondria catabolize nutrients for energy, generate biosynthetic precursors for macromolecules, compartmentalize metabolites for the maintenance of redox homeostasis and function as hubs for metabolic waste management. We address the importance of these roles in both normal physiology and in disease.
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TL;DR
This review argues that mitochondria contribute to cellular metabolism well beyond ATP production, serving as bioenergetic powerhouses, biosynthetic hubs, balancers of redox equivalents, and waste-management centres. It synthesizes how metabolic compartmentalization enables these roles in normal physiology and disease, and highlights unresolved questions about metabolite transport and in vitro/in vivo discrepancies.
Key findings
- Mitochondria catabolize diverse fuels — pyruvate (via MPC, then PDC or PC), glutamine (via GLS/GDH), branched-chain amino acids, and fatty acids (via CPT1/CPT2) — to supply both ATP and TCA cycle intermediates, with compartmentalization determining pyruvate's fate between oxidation and lactate production.
- Mitochondria are biosynthetic hubs for nucleotides (1C metabolism via SHMT2/MTHFD2, pyrimidines via DHODH), citrate (exported by SLC25A1 for FAS, cholesterol, ketone bodies), amino acids, gluconeogenesis (initiated by PC), and heme (ALAS through FECH).
- Redox balance depends on shuttles: the malate-aspartate shuttle, citrate-malate shuttle, and α-glycerophosphate shuttle, plus 1C metabolism as a major NADPH source; the cytosolic NAD+/NADH ratio is reported as 60–700 versus approximately 7–8 in mitochondria.
- Mitochondria manage waste products — ammonia (urea cycle, GS, GDH), ROS (SOD2, Prx3/Prx5, Trx2, TRXR2), and H2S (SQR, SO) — and these by-products also serve signaling roles (e.g., ROS in proliferation and immune activation).
Methods
- Narrative review; no primary experimental data, sample, or statistical analysis is reported.
- The authors synthesize published literature across bioenergetics, biosynthesis, redox biology, and waste metabolism, organized around four functional themes with supporting figures (Figures 1–4).
- No systematic search strategy, inclusion criteria, or quantitative synthesis is described.
Limitations
- The paper states no formal limitations of its own; it repeatedly flags open questions, including uncharacterized mitochondrial transporters for glutamine, BCAAs, and glutathione, unknown mechanisms of carbamoyl phosphate export, and uncertainty about which transporter dominates malate export in gluconeogenesis.
- The authors explicitly caution that in vitro and in vivo metabolic dependencies often diverge (e.g., glutaminase inhibitor sensitivity depends on extracellular cystine), and that mitochondrial metabolite concentrations differ from whole-cell concentrations — limitations of the underlying literature rather than of the review itself.
- Evident from the text: as a narrative review, it offers no new data, and several claims are explicitly speculative (e.g., the authors "speculate" on links between heme metabolism and ROS-sensitive signaling).
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Cites
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Claims the paper makes
0 of 71 cited sources checked · 0 supported · 0 flagged
- Premisecitation
PDC deficiency is sufficient to rewire energy metabolism towards aerobic glycolysis despite the potential adaptive node for TCA cycle anaplerosis mediated by PC.
“PDC deficiency is sufficient to rewire energy metabolism towards aerobic glycolysis despite the potential adaptive node for TCA cycle anaplerosis (a process to replenish TCA cycle intermediates), mediated by PC.28”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [28] Patel, K. P., O’Brien, T. W., Subramony, S. H., Shuster, J. & Stacpoole, P. W. The spectrum of pyruvate dehydrogenase complex deficiency: clinical, biochemical and genetic features in 371 patients. Mol. Genet. Metab. 105, 34–43 (2012). source
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- Premisenone given
In mitochondria, glutaminase converts glutamine into glutamate and ammonia.
“In mitochondria, glutaminase (GLS) converts glutamine into glutamate and ammonia.”
Quote in the paperSubstantial claim - Premisecitation
The tissue of origin dictates dependency on BCAA catabolism in normal physiology and in cancer.
“The tissue of origin dictates dependency on BCAA catabolism in normal physiology and in cancer.45”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [45] Mayers, J. R. et al. Tissue of origin dictates branched-chain amino acid metabolism in mutant Kras-driven cancers. Science 353, 1161–1165 (2016). source
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- Premisenone given
Mitochondrial fatty acid import is a rate-determining step for fatty acid oxidation.
“Mitochondrial FA import is a rate-determining step for fatty acid oxidation (FAO) and demonstrates how metabolic compartmentalization adapts to cellular state.”
Quote in the paperNot a substantial claim - Premisecitation
Glutamine anaplerosis is critical for meeting the energetic requirements of proliferative cells, such as T cells during the transition from quiescent naïve T cells to effector cells, and in cancers, particularly with MYC elevation.
“Glutamine anaplerosis is critical for meeting the energetic requirements of proliferative cells, such as T cells during the transition from quiescent naïve T cells to effector cells, and in cancers, particularly with MYC elevation.32,36,37”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [32] DeBerardinis, R. J. et al. Beyond aerobic glycolysis: transformed cells can engage in glutamine metabolism that exceeds the requirement for protein and nucleotide synthesis. Proc. Natl Acad. Sci. USA 104, 19345–19350 (2007). source
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- cites [36] Wang, R. et al. The transcription factor Myc controls metabolic reprogramming upon T lymphocyte activation. Immunity 35, 871–882 (2011). source
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- cites [37] Wise, D. R. et al. Myc regulates a transcriptional program that stimulates mitochondrial glutaminolysis and leads to glutamine addiction. Proc. Natl Acad. Sci. 105, 18782–18787 (2008). source
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- Premisecitation
Oxidative phosphorylation is the largest source of cellular ATP.
“Whereas oxidative phosphorylation is the largest source of cellular ATP, the potential energy generated by the ETC is also harnessed for biosynthetic purposes.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [8] Watt, I. N., Montgomery, M. G., Runswick, M. J., Leslie, A. G. & Walker, J. E. Bioenergetic cost of making an adenosine triphosphate molecule in animal mitochondria. Proc. Natl Acad Sci. USA 107, 16823–16827 (2010). source
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- Premisecitation
The BCAAs leucine, isoleucine, and valine are a major source of cellular energy via acetyl CoA and succinyl CoA generation.
“The BCAAs leucine, isoleucine, and valine are a major source of cellular energy via acetyl CoA and succinyl CoA generation.44”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [44] Brosnan, J. T. & Brosnan, M. E. Branched-chain amino acids: metabolism, physiological function and application. J. Nutr. 136, 207–211 (2006). source
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- Premisecitation
Many cancers favor PC-mediated anaplerosis.
“Many cancers favor PC-mediated anaplerosis, although the factors that dictate the choice for pyruvate flux between PC and PDC are little studied.27,29,30”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [27] Sellers, K. et al. Pyruvate carboxylase is critical for non-small-cell lung cancer proliferation. J. Clin. Invest. 125, 687–698 (2015). source
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- cites [29] Christen, S. et al. Breast cancer-derived lung metastases show increased pyruvate carboxylase-dependent anaplerosis. Cell Rep. 17, 837–848 (2016). source
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- cites [30] Davidson, S. M. et al. Environment impacts the metabolic dependencies of Ras-driven non-small cell lung cancer. Cell Metab. 23, 517–528 (2016). source
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- Premisecitation
In healthy tissue, the fate of pyruvate depends on oxygen availability and mitochondrial respiratory capacity.
“In healthy tissue, the fate of pyruvate is dependent on oxygen availability and mitochondrial respiratory capacity.14”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [14] Vander Heiden, M. G., Cantley, L. C. & Thompson, C. B. Understanding the Warburg effect: the metabolic requirements of cell proliferation. Science 324, 1029–1033 (2009). source
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- Premisecitation
Suppression of MPC accelerates proliferation in intestinal stem cells.
“Suppression of MPC accelerates proliferation in intestinal stem cells,24”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [24] Schell, J. C. et al. Control of intestinal stem cell function and proliferation by mitochondrial pyruvate metabolism. Nat. Cell Biol. 19, 1027–1036 (2017). source
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- Premisereasoning
Fatty acids are a major source of cellular energy, particularly under conditions of nutrient stress.
“Therefore, FAs are a major source of cellular energy, particularly under conditions of nutrient stress.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [49] Rohrig, F. & Schulze, A. The multifaceted roles of fatty acid synthesis in cancer. Nat. Rev. Cancer 16, 732–749 (2016). source
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- Premisecitation
Mitochondria coordinate cellular adaptation to stressors such as nutrient deprivation, oxidative stress, DNA damage and ER stress.
“Mitochondria coordinate cellular adaptation to stressors such as nutrient deprivation, oxidative stress, DNA damage and ER stress.5”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [5] Vyas, S., Zaganjor, E. & Haigis, M. C. Mitochondria and cancer. Cell 166, 555–566 (2016). source
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- Premisecitation
GLS inhibition suppresses proliferation.
“GLS inhibition suppresses proliferation, and GLS inhibitors are being evaluated in clinical studies for a number of cancers.31,38,39”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [31] DeBerardinis, R. J. & Cheng, T. Q’s next: the diverse functions of glutamine in metabolism, cell biology and cancer. Oncogene 29, 313–324 (2010). source
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- cites [38] Wang, J. B. et al. Targeting mitochondrial glutaminase activity inhibits oncogenic transformation. Cancer Cell 18, 207–219 (2010). source
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- cites [39] Jin, L., Alesi, G. N. & Kang, S. Glutaminolysis as a target for cancer therapy. Oncogene 35, 3619–3625 (2016). source
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- Premisecitation
Glutamine anaplerosis sustains TCA cycle intermediates in conditions of limiting glucose and MPC inhibition.
“Glutamine anaplerosis sustains TCA cycle intermediates in conditions of limiting glucose and MPC inhibition, demonstrating the potential flexibility of these metabolic nodes.34,35”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [34] Yang, C. et al. Glutamine oxidation maintains the TCA cycle and cell survival during impaired mitochondrial pyruvate transport. Mol. Cell 56, 414–424 (2014). source
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- cites [35] Vacanti, N. M. et al. Regulation of substrate utilization by the mitochondrial pyruvate carrier. Mol. Cell 56, 425–435 (2014). source
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- Premisecitation
Tetrahydrofolate is the carrier that mediates 1C transfer reactions for de novo nucleotide synthesis.
“The co-factor tetrahydrofolate (THF) is the carrier that mediates 1C transfer reactions for de novo nucleotide synthesis.66,67”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [66] Ducker, G. S. & Rabinowitz, J. D. One-carbon metabolism in health and disease. Cell Metab. 25, 27–42 (2017). source
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- cites [67] Tibbetts, A. S. & Appling, D. R. Compartmentalization of mammalian folate-mediated one-carbon metabolism. Annu. Rev. Nutrit. 30, 57–81 (2010). source
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- Premisecitation
In the absence of SHMT2, cytosolic SHMT1 reverses flux to compensate.
“In the absence of SHMT2, cytosolic SHMT1 reverses flux to compensate69”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [69] Ducker, G. S. et al. Reversal of cytosolic one-carbon flux compensates for loss of the mitochondrial folate pathway. Cell Metab. 23, 1140–1153 (2016). source
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- Premisecitation
Highly proliferative cells such as cancer cells and activated T cells rely on mitochondrial metabolites to form biomass.
“Rather than being dysfunctional, highly proliferative cells such as cancer cells and activated T cells rely on mitochondrial metabolites to form biomass.5,65”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [5] Vyas, S., Zaganjor, E. & Haigis, M. C. Mitochondria and cancer. Cell 166, 555–566 (2016). source
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- cites [65] Walker, M. A., Volpi, S., Sims, K. B., Walter, J. E. & Traggiai, E. Powering the immune system: mitochondria in immune function and deficiency. J. Immunol. Res. 2014, 164309 (2014). source
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- Premisenone given
MTHFD2 converts 5,10 methylene-THF to 10-formyl-THF.
“Mitochondrial methylenetetrahydrofolate dehydrogenase (MTHFD2) converts 5,10 methylene-THF to 10-formyl-THF.”
Quote in the paperNot a substantial claim - Premisecitation
DHODH is required for de novo pyrimidine synthesis.
“The IMM enzyme dihydroorotate dehydrogenase (DHODH), which oxidizes dihydroorotate to orotate, is required for de novo pyrimidine synthesis.73”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [73] Munier-Lehmann, H., Vidalain, P. O., Tangy, F. & Janin, Y. L. On dihydroorotate dehydrogenases and their inhibitors and uses. J. Med. Chem. 56, 3148–3167 (2013). source
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- Premisecitation
Mitochondrial citrate is exported by the malate-citrate antiporter SLC25A1.
“Mitochondrial citrate is exported by the malate-citrate antiporter SLC25A1.82”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [82] Sun, J., Aluvila, S., Kotaria, R., Mayor, J. A., Walters, E. D. & Kaplan, R. Mitochondrial and plasma membrane citrate transporters: discovery of selective inhibitors and application to structure/function analysis. Mol. Cell Pharmacol. 2, 101–110 (2010).
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- Premisecitation
Mitochondrial biogenesis and SHMT2/MTHFD2 expression are promoted during T-cell activation to support proliferation.
“mitochondrial biogenesis and SHMT2/MTHFD2 expression are promoted during T-cell activation to support proliferation.72”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [72] Ron-Harel, N. et al. Mitochondrial biogenesis and proteome remodeling promote one-carbon metabolism for T cell activation. Cell Metab. 24, 104–117 (2016). source
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- Premisecitation
T cells require DHODH for clonal expansion and differentiation into effector cells.
“Consistent with their reliance on 1C metabolism, T cells require DHODH for clonal expansion and differentiation into effector cells.74”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [74] Herrmann, M. L., Schleyerbach, R. & Kirschbaum, B. J. Leflunomide: an immunomodulatory drug for the treatment of rheumatoid arthritis and other autoimmune diseases. Immunopharmacology 47, 273–289 (2000). source
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- Premisecitation
Cytosolic citrate is a potent allosteric regulator of ACC by increasing its polymerization and activity.
“Cytosolic citrate is a potent allosteric regulator of ACC by increasing its polymerization and activity.83”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [83] Kim, C. W. et al. Induced polymerization of mammalian acetyl-CoA carboxylase by MIG12 provides a tertiary level of regulation of fatty acid synthesis. Proc. Natl Acad. Sci. USA 107, 9626–9631 (2010). source
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- Premisecitation
DHODH activity is elevated in response to DNA damage and upon genotoxic chemotherapy treatment to increase nucleotide synthesis for DNA repair.
“DHODH activity is also elevated in response to DNA damage and upon genotoxic chemotherapy treatment to increase nucleotide synthesis for DNA repair.76,77”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [76] Jeong, S. M. et al. SIRT4 has tumor-suppressive activity and regulates the cellular metabolic response to DNA damage by inhibiting mitochondrial glutamine metabolism. Cancer Cell 23, 450–463 (2013). source
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- cites [77] Brown, K. K., Spinelli, J. B., Asara, J. M. & Toker, A. Adaptive reprogramming of de novo pyrimidine synthesis is a metabolic vulnerability in triple-negative breast cancer. Cancer Discov. 7, 391–399 (2017). source
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- Premisecitation
MTHFD2 is overexpressed in many human cancers.
“MTHFD2 is overexpressed in many human cancers71”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [71] Nilsson, R. et al. Metabolic enzyme expression highlights a key role for MTHFD2 and the mitochondrial folate pathway in cancer. Nat. Commun. 5, 3128 (2014).
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- Premisecitation
Mitochondrial formate is the main carbon source for cytosolic 1C metabolism.
“Mitochondrial contributions to this pathway are critical, as mitochondrial formate is the main carbon source for cytosolic 1C metabolism 66”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [66] Ducker, G. S. & Rabinowitz, J. D. One-carbon metabolism in health and disease. Cell Metab. 25, 27–42 (2017). source
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- Premisenone given
In the cytosol, citrate is converted to acetyl CoA via ACLY.
“In the cytosol, citrate is converted to acetyl CoA via ACLY, which can access many pathways, including conversion to malonyl CoA by the activity of ACC (as described above).”
Quote in the paperNot a substantial claim - Premisenone given
SLC25A32 imports THF into the mitochondria, where it is converted by SHMT2 into 5,10 methylene-THF and glycine.
“The carrier SLC25A32 imports THF into the mitochondria, where it is converted by serine hydroxymethyltransferase (SHMT2) into 5,10 methylene-THF and glycine.”
Quote in the paperNot a substantial claim
- May combine two claims. 29
- Classified as probably not a substantial claim. 5
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PremisecitationThe catabolism of glutamine often starts in the mitochondria and its carbon and nitrogen atoms are distributed into macromolecules throughout the cell, including TCA cycle intermediates, amino acids, nucleotides, glutathione, and lipids.
“The catabolism of glutamine, the most abundant amino acid, often starts in the mitochondria and its carbon and nitrogen atoms are distributed into macromolecules throughout the cell, including TCA cycle intermediates (important in bioenergetics), amino acids, nucleotides, glutathione, and lipids.31”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [31] DeBerardinis, R. J. & Cheng, T. Q’s next: the diverse functions of glutamine in metabolism, cell biology and cancer. Oncogene 29, 313–324 (2010). source
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PremisecitationPharmacological inhibition of MPC represses mitochondrial pyruvate uptake, shifting reliance to glycolysis for ATP production.
“Pharmacological inhibition of MPC represses mitochondrial pyruvate uptake, shifting reliance to glycolysis for ATP production.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [15] Herzig, S. et al. Identification and functional expression of the mitochondrial pyruvate carrier. Science 337, 93–96 (2012). source
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- cites [16] Bricker, D. K. et al. A mitochondrial pyruvate carrier required for pyruvate uptake in yeast, Drosophila, and humans. Science 337, 96–100 (2012). source
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InterpretationreasoningThe role of MPC is context-dependent and sensitive to mitochondrial respiratory capacity and/or nutrient availability.
“suggesting that the role of MPC is context-dependent and sensitive to mitochondrial respiratory capacity and/or nutrient availability.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S4 (based).
Premisenone givenMitochondria produce metabolic precursors for macromolecules such as lipids, proteins, DNA and RNA.
“In addition to ATP, mitochondria produce metabolic precursors for macromolecules such as lipids, proteins, DNA and RNA.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisereasoningMitochondrial reactions are required components of metabolic pathways because cellular metabolism is compartmentalized.
“This integral relationship is demonstrated by the compartmentalized nature of cellular metabolism, in which mitochondrial reactions are required components of metabolic pathways.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationCancer cells rewire glucose metabolism for lactate synthesis even in normoxia, known as the Warburg Effect.
“Otto Warburg observed that cancer cells rewire glucose metabolism for lactate synthesis even in normoxia, known as the Warburg Effect.14,21”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [14] Vander Heiden, M. G., Cantley, L. C. & Thompson, C. B. Understanding the Warburg effect: the metabolic requirements of cell proliferation. Science 324, 1029–1033 (2009). source
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- cites [21] Diaz-Ruiz, R., Rigoulet, M. & Devin, A. The Warburg and Crabtree effects: on the origin of cancer cell energy metabolism and of yeast glucose repression. Biochim. Biophys. acta 1807, 568–576 (2011). source
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PremisecitationIn normoxia, pyruvate is generated via glycolysis and transported across the IMM through the Mitochondrial Pyruvate Carrier, then catabolized inside mitochondria through the TCA cycle.
“In normoxia, pyruvate is generated via glycolysis and transported across the IMM through the Mitochondrial Pyruvate Carrier (MPC).15,16 Pyruvate is further catabolized inside mitochondria through the TCA cycle.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [15] Herzig, S. et al. Identification and functional expression of the mitochondrial pyruvate carrier. Science 337, 93–96 (2012). source
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- cites [16] Bricker, D. K. et al. A mitochondrial pyruvate carrier required for pyruvate uptake in yeast, Drosophila, and humans. Science 337, 96–100 (2012). source
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PremisecitationBCAA catabolism is repressed in maple syrup urine disease, which is caused by mutations to branched-chain keto acid dehydrogenase and causes dysfunction of immune cells, skeletal muscle and the central nervous system.
“BCAA catabolism is repressed in maple syrup urine disease, which is caused by mutations to branched-chain keto acid dehydrogenase (BCKDH) and causes dysfunction of immune cells, skeletal muscle and the central nervous system.48”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [48] Blackburn, P. R. et al. Maple syrup urine disease: mechanisms and management. Appl. Clin. Genet. 10, 57–66 (2017). source
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Interpretationnone givenMitochondria catabolize nutrients for energy, generate biosynthetic precursors for macromolecules, compartmentalize metabolites for redox homeostasis, and function as hubs for metabolic waste management.
“Mitochondria catabolize nutrients for energy, generate biosynthetic precursors for macromolecules, compartmentalize metabolites for the maintenance of redox homeostasis, and function as hubs for metabolic waste management.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationDuring hypoxia, mitochondrial respiration is repressed, causing cells to adaptively sink electrons onto pyruvate through lactate dehydrogenase, generating lactate in the cytosol.
“During hypoxia, mitochondrial respiration is repressed, causing cells to adaptively sink electrons onto pyruvate through lactate dehydrogenase (LDH), generating lactate in the cytosol.17”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [17] Papandreou, I., Cairns, R. A., Fontana, L., Lim, A. L. & Denko, N. C. HIF-1 mediates adaptation to hypoxia by actively downregulating mitochondrial oxygen consumption. Cell Metab. 3, 187–197 (2006). source
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PremisecitationCancer cells repress MPC1 to promote the Warburg Effect, and myocytes of diabetic mice elevate glucose consumption in response to MPC inhibition.
“This shift is evident in cancer cells, which repress MPC1 to promote the Warburg Effect, and in myocytes of diabetic mice, which elevate glucose consumption in response to MPC inhibition22,23”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [22] Schell, J. C. et al. A role for the mitochondrial pyruvate carrier as a repressor of the Warburg effect and colon cancer cell growth. Mol. Cell 56, 400–413 (2014). source
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- cites [23] Divakaruni, A. S. et al. Thiazolidinediones are acute, specific inhibitors of the mitochondrial pyruvate carrier. Proc. Natl Acad. Sci. USA 110, 5422–5427 (2013). source
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Premisenone givenMitochondria generate metabolic by-products such as ROS and ammonia and possess mechanisms to clear or utilize waste products.
“Mitochondria also generate metabolic by-products, such as reactive oxygen species (ROS) and ammonia, and possess mechanisms to clear or utilize waste products.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationCPT1 forms acylcarnitines from fatty acyl CoAs; acylcarnitines are shuttled into mitochondria through SLC25A20; CPT2 liberates fatty acid from carnitine, initiating FAO.
“The outer mitochondrial membrane (OMM) enzyme carnitine palmitoyl transferase 1 (CPT1) forms acylcarnitines from fatty acyl CoAs.50 Acylcarnitines are shuttled into mitochondria through the carnitine–acylcarnitine translocase (SLC25A20) in the IMM. CPT2 liberates FA from carnitine, initiating FAO.51”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [50] McGarry, J. D. & Brown, N. F. The mitochondrial carnitine palmitoyltransferase system from concept to molecular analysis. Eur. J. Biochem. 244, 1–14 (1997). source
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- cites [51] Houten, S. M. & Wanders, R. J. A. A general introduction to the biochemistry of mitochondrial fatty acid β-oxidation. J. Inherit. Metab. Dis. 33, 469–477 (2010). source
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PremisecitationSensitivity to GLS inhibition in vitro is not always consistent in vivo and is dependent on extracellular cystine levels.
“However, sensitivity to GLS inhibition in vitro is not always consistent in vivo, and is dependent on extracellular cystine levels.40”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [40] Muir, A. et al. Environmental cystine drives glutamine anaplerosis and sensitizes cancer cells to glutaminase inhibition. eLife 6, e27713 (2017). source
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PremisecitationIn normal physiology, myocytes and adipocytes activate mitochondrial BCAA catabolic enzymes to support ATP production during exercise or fasting and differentiation, respectively.
“In normal physiology, myocytes and adipocytes activate mitochondrial BCAA catabolic enzymes to support ATP production during exercise or fasting and differentiation, respectively.46,47”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [46] Shimomura, Y., Murakami, T., Nakai, N., Nagasaki, M. & Harris, R. A. Exercise promotes BCAA catabolism: effects of BCAA supplementation on skeletal muscle during exercise. J. Nutr. 134, 1583–1587 (2004). source
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- cites [47] Green, C. R. et al. Branched-chain amino acid catabolism fuels adipocyte differentiation and lipogenesis. Nat. Chem. Biol. 12, 15–21 (2016). source
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PremisecitationPDC and PC both catalyze the flux of pyruvate into the TCA cycle, but their metabolic roles do not appear to be interchangeable.
“Although PDC and PC both catalyze the flux of pyruvate into the TCA cycle, their enzymatic activities can be distinguished by stable isotope tracing26,27, and their metabolic roles do not appear to be interchangeable.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [26] Metallo, C. M., Walther, J. L. & Stephanopoulos, G. Evaluation of 13C isotopic tracers for metabolic flux analysis in mammalian cells. J. Biotech. 144, 167–174 (2009). source
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- cites [27] Sellers, K. et al. Pyruvate carboxylase is critical for non-small-cell lung cancer proliferation. J. Clin. Invest. 125, 687–698 (2015). source
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PremisecitationMTHFD2 expression is regulated by mTORC1 and is critical for growth and proliferation.
“MTHFD2 expression is regulated by mTORC1, and is critical for growth and proliferation.70”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [70] Ben-Sahra, I., Hoxhaj, G., Ricoult, S. J. H., Asara, J. M. & Manning, B. D. mTORC1 induces purine synthesis through control of the mitochondrial tetrahydrofolate cycle. Science 351, 728–733 (2016). source
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PremisecitationSHMT2 favors production of glycine and 5,10 methylene-THF, and cells deficient in mitochondrial 1C metabolism are glycine auxotrophs.
“SHMT2 favors production of glycine and 5,10 methylene-THF, and cells deficient in mitochondrial 1C metabolism are glycine auxotrophs.68”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [68] Chasin, L. A., Feldman, A., Konstam, M. & Urlaub, G. Reversion of a chinese hamster cell auxotrophic mutant. Proc. Natl Acad. Sci. USA 71, 718–722 (1974). source
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PremisecitationAcetyl CoA from FAO is used for the TCA cycle as well as for aspartate and nucleotide synthesis.
“Acetyl CoA from FAO is used for the TCA cycle as well as for aspartate and nucleotide synthesis.52”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [52] Schoors, S. et al. Fatty acid carbon is essential for dNTP synthesis in endothelial cells. Nature 520, 192–197 (2015). source
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PremisecitationACC2 is hydroxylated by PHD3, and hydroxylation promotes ACC2 activity in nutrient abundance.
“ACC2 is also hydroxylated by the dioxygenase prolyl hydroxylase 3 (PHD3).55 Hydroxylation promotes ACC2 activity in nutrient abundance.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [55] German, N. J. et al. PHD3 loss in cancer enables metabolic reliance on fatty acid oxidation via deactivation of ACC2. Mol. Cell 63, 1006–1020 (2016). source
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May combine two claims.
PremisecitationDHODH is targeted in autoimmune disorders and inhibition suppresses myeloid differentiation of AML cells.
“DHODH is targeted in autoimmune disorders and inhibition suppresses myeloid differentiation of AML cells.75”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [75] Sykes, D. B. et al. Inhibition of dihydroorotate dehydrogenase overcomes differentiation blockade in acute myeloid leukemia. Cell 167, 171–186 (2016). source
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PremisecitationCitrate is generated by citrate synthase or through the reduction of α-ketoglutarate by isocitrate dehydrogenase.
“Citrate is generated by citrate synthase (CS) or through the reduction of α-ketoglutarate by isocitrate dehydrogenase (IDH).79–81”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [79] Metallo, C. M. et al. Reductive glutamine metabolism by IDH1 mediates lipogenesis under hypoxia. Nature 481, 380–384 (2012). source
Not checked in the free run.
- cites [80] Mullen, A. R. et al. Reductive carboxilation supports growth in tumor cells with defective mitochondria. Nature 481, 385–388 (2012). source
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- cites [81] Jiang, L. et al. Reductive carboxylation supports redox homeostasis during anchorage-independent growth. Nature 532, 255–258 (2016). source
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May combine two claims.
PremisecitationFAO is fundamental for the survival and function of memory CD8+ T cells, unlike effector cells that rely on glycolysis and glutaminolysis for energy.
“FAO is fundamental for the survival and function of memory CD8+ T cells, unlike effector cells that rely on glycolysis and glutaminolysis for energy.60,61”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [60] Pearce, E. L. et al. Enhancing CD8 T-cell memory by modulating fatty acid metabolism. Nature 460, 103–107 (2009). source
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- cites [61] O’Sullivan, D. et al. Memory CD8+ T cells use cell-intrinsic lipolysis to support the metabolic programming necessary for development. Immunity 41, 75–88 (2014). source
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PremisecitationMalonyl CoA represses CPT1 to inhibit acylcarnitine import, and its levels dictate the balance of fat synthesis or oxidation within a cell.
“Malonyl CoA, generated by the enzyme acetyl CoA carboxylase (ACC), represses CPT1 to inhibit acylcarnitine import.53 Malonyl CoA is the initiating metabolite for FAS, and its levels dictate the balance of fat synthesis or oxidation within a cell.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [53] Ruderman, N. & Prentki, M. AMP kinase and malonyl-CoA: targets for therapy of the metabolic syndrome. Nat. Rev. Drug Discov. 3, 340–351 (2004). source
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Premisenone givenThe 1C metabolic pathway generates and transfers activated one carbon units for de novo nucleotide synthesis, compartmentalizes amino acids, and contributes to redox homeostasis.
“The 1C metabolic pathway involves a set of reactions that generate and transfer activated one carbon (1C) units for de novo nucleotide synthesis, compartmentalize amino acids, and contribute to redox homeostasis.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationIn low energy conditions, AMPK phosphorylates and inhibits ACC, decreasing malonyl CoA and increasing CPT1 activity.
“In low energy conditions, AMP-activated protein kinase (AMPK) phosphorylates and inhibits ACC, decreasing malonyl CoA and increasing CPT1 activity.54”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [54] Munday, M. R. Regulation of mammalian acetyl-CoA carboxylase. Biochem. Soc. Trans. 30, 1059–1063 (2002). source
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PremisecitationSLC25A1 is sensitive to membrane rigidity, and high levels of cholesterol or acidic phospholipids in the IMM repress mitochondrial citrate export.
“SLC25A1 is sensitive to membrane rigidity, and high levels of cholesterol or acidic phospholipids in the IMM repress mitochondrial citrate export.84”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [84] Glerum, D. M., Claeys, D., Mertens, W. SpringerAmpamp; Azzi, A. The tricarboxylate carrier from rat liver mitochondria. Euro. J. Biochem. 194, 681–684 (1990). source
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PremisecitationFAO is activated in insulin resistance, in which free fatty acids provide a compensatory fuel for repressed glucose uptake.
“Likewise, FAO is activated in insulin resistance, in which free fatty acids provide a compensatory fuel for repressed glucose uptake.62,63”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [62] Stern, J. H., Rutkowski, J. M. & Scherer, P. E. Adiponectin, leptin, and fatty acids in the maintenance of metabolic homeostasis through adipose tissue crosstalk. Cell Metab. 23, 770–784 (2016). source
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- cites [63] Serra, D., Mera, P., Malandrino, M. I., Mir, J. F. & Herrero, L. Mitochondrial fatty acid oxidation in obesity. Antioxid. Redox Sign. 19, 269–284 (2013). source
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Premisenone givenActivated THF molecules are generated through an oxidative/reductive cycle that catabolizes serine in the mitochondria and synthesizes serine in the cytosol.
“Activated THF molecules are generated through an oxidative/reductive cycle that catabolizes serine (to generate glycine) in the mitochondria and synthesizes serine in the cytosol.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationMitochondrial citrate controls anabolic reactions by directly acting as the carbon source for fatty acids, cholesterol and ketone bodies through ATP citrate lyase, and by allosteric modulation.
“Mitochondrial citrate controls anabolic reactions by directly acting as the carbon source for FAs, cholesterol and ketone bodies through ATP citrate lyase (ACLY),78 and by allosteric modulation.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [78] Hatzivassiliou, G. et al. ATP citrate lyase inhibition can suppress tumor cell growth. Cancer Cell 8, 311–321 (2005). source
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PremisecitationPHD3 is suppressed in cancers that rely on FAO, such as AML and prostate cancer, and elevated in cancers that rely on FAS such as breast and non-small-lung-cell cancer.
“PHD3 is suppressed in cancers that rely on FAO, such as AML and prostate cancer, and elevated in cancers that rely on FAS such as breast and non-small-lung-cell cancer.55–57”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [55] German, N. J. et al. PHD3 loss in cancer enables metabolic reliance on fatty acid oxidation via deactivation of ACC2. Mol. Cell 63, 1006–1020 (2016). source
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- cites [56] Currie, E., Schulze, A., Zechner, R., Walther, T. C. & Farese, R. V. Jr. Cellular fatty acid metabolism and cancer. Cell Metab. 18, 153–161 (2013). source
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- cites [57] Svensson, R. U. et al. Inhibition of acetyl-CoA carboxylase suppresses fatty acid synthesis and tumor growth of non-small-cell lung cancer in preclinical models. Nat. Med. 22, 1108–1119 (2016). source
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PremisecitationMitochondria participate in the biosynthesis of nucleotides, fatty acids, cholesterol, amino acids, glucose, and heme.
“Mitochondria participate in the biosynthesis of nucleotides, FAs, cholesterol, amino acids, glucose, and heme (Figure 2).64”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [64] Ahn, C. S. & Metallo, C. M. Mitochondria as biosynthetic factories for cancer proliferation. Cancer Metab. 3, 1 (2015). source
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Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Mitochondria are involved in neuronal redox homeostasis, reactive oxygen species production, calcium buffering, and intracellular signaling.
“Mitochondria are also involved in neuronal redox homeostasis, reactive oxygen species (ROS) production, calcium buffering, and intracellular signaling [41–44].”
From Neuronal Apolipoprotein E4 Expression Results in Proteome-Wide Alterations and Compromises Bioenergetic Capacity by Disrupting Mitochondrial Function (2019) · cites this paper as [41]
The sections “Mitochondria balance redox equivalents” and “ROS” describe mitochondrial roles in cellular redox balance, ROS production, and signaling (page numbers unavailable). They do not establish these roles specifically in neurons, and the searched passages do not address calcium buffering. (LLM, conf=0.87)
Experimental — accuracy not yet measuredMitochondrial pathways are important for amino acid production.
“given the importance of mitochondrial pathways for amino acid production (10, 18).”
From Overlooked <i>Candida glabrata</i> petites are echinocandin tolerant, induce host inflammatory responses, and display poor <i>in vivo</i> fitness (2023) · cites this paper as [18]
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- Authors
- Spinelli, J. B., & Haigis, M. C.
- Affiliations
- Harvard University (US)
- Corresponding author
- Haigis, Marcia C.
- Venue
- Nature Cell Biology
- Published
- 2018-06-27
- Volume
- 20
- Issue
- 7
- Pages
- 745-754
- ISSN
- 1465-7392 (ISSN-L)
- 1476-4679
- PMC
- PMC6541229
- OpenAlex
- W2809281987
- Semantic Scholar
- 34ccb7994b9f5158a07c5aebd168839ff3256cea
- Cited by
- 1,935
- References
- 164
- Citations by year
- 2026: 317 · 2025: 346 · 2024: 331 · 2023: 309 · 2022: 228 · 2021: 222 · 2020: 131 · 2019: 43 · 2018: 7
- FWCI
- 9.89
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Cell Biology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institutes of Health
- National Cancer Institute (R01CA213062)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolism, Diabetes, and Cancer
- Keywords
- mitochondria, cellular metabolism, energy metabolism, biosynthetic precursors, redox homeostasis, mitochondrial disease
- MeSH terms
- Animals, Biological Transport, Cell Survival, Energy Metabolism, Homeostasis, Humans, Mitochondria, Oxidation-Reduction, Signal Transduction, Reactive Oxygen Species, Oxidative Stress
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