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RegulonDB: a database on transcriptional regulation in Escherichia coli
Open accessAbstract
RegulonDB is a DataBase that integrates biological knowledge of the mechanisms that regulate the transcription initiation in Escherichia coli , as well as knowledge on the organization of the genes and regulatory signals into operons in the chromosome. The operon is the basic structure used in RegulonDB to describe the elements and properties of transcriptional regulation. The current version contains information around some 500 regulation mechanisms, essentially for sigma 70 promoters.
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Citations
Cited by
Liu, Z.-P., Wu, C., Miao, H., & Wu, H. (2015) · Database · doi:10.1093/database/bav095 · Cited by 555
Parallel changes in gene expression after 20,000 generations of evolution in Escherichia coli
Cooper, T. F., Rozen, D. E., & Lenski, R. E. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0334340100 · Cited by 440
Salgado, H. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkj156 · Cited by 368
The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12
Perez-Rueda, E. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.8.1838 · Cited by 309
Johnson, Z., Anderson, D., Cheung, M. S., & Bohutskyi, P. (2025) · Frontiers in Microbiology · doi:10.3389/fmicb.2025.1569559 · Cited by 12
Metadata
- Authors
- Huerta, A.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 1998-01-01
- Volume
- 26
- Issue
- 1
- Pages
- 55-59
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2118640842
- Cited by
- 197
- References
- 0
- FWCI
- 3.41
- Type
- journal article
- Language
- en
- Open access
- green
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- Huerta, A. (1998). RegulonDB: a database on transcriptional regulation in Escherichia coli. Nucleic Acids Research. https://doi.org/10.1093/nar/26.1.55
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