The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
OligoCalc: an online oligonucleotide properties calculator
Open accessAbstract
We developed OligoCalc as a web-accessible, client-based computational engine for reporting DNA and RNA single-stranded and double-stranded properties, including molecular weight, solution concentration, melting temperature, estimated absorbance coefficients, inter-molecular self-complementarity estimation and intra-molecular hairpin loop formation. OligoCalc has a familiar 'calculator' look and feel, making it readily understandable and usable. OligoCalc incorporates three common methods for calculating oligonucleotide-melting temperatures, including a nearest-neighbor thermodynamic model for melting temperature. Since it first came online in 1997, there have been more than 900,000 accesses of OligoCalc from nearly 200,000 distinct hosts, excluding search engines. OligoCalc is available at http://basic.northwestern.edu/biotools/OligoCalc.html, with links to the full source code, usage patterns and statistics at that link as well.
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Cites
Mfold web server for nucleic acid folding and hybridization prediction
Zuker, M. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg595 · Cited by 13,404
Mathews, D. H., Sabina, J., Zuker, M., & Turner, D. H. (1999) · Journal of Molecular Biology · doi:10.1006/jmbi.1999.2700 · Cited by 3,795
Xia, T., SantaLucia, J., Burkard, M. E., Kierzek, R., Schroeder, S. J., Jiao, X., Cox, C., & Turner, D. H. (1998) · Biochemistry · doi:10.1021/bi9809425 · Cited by 1,140
Cited by
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Apprill, A., McNally, S., Parsons, R., & Weber, L. (2015) · Aquatic Microbial Ecology · doi:10.3354/ame01753 · Cited by 2,707
Touchdown PCR for increased specificity and sensitivity in PCR amplification
Korbie, D. J., & Mattick, J. S. (2008) · Nature Protocols · doi:10.1038/nprot.2008.133 · Cited by 624
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Turner, C. R., Uy, K. L., & Everhart, R. C. (2015) · Biological Conservation · doi:10.1016/j.biocon.2014.11.017 · Cited by 555
Precision is essential for efficient catalysis in an evolved Kemp eliminase
Blomberg, R., Kries, H., Pinkas, D. M., Mittl, P. R. E., Grütter, M. G., Privett, H. K., Mayo, S. L., & Hilvert, D. (2013) · Nature · doi:10.1038/nature12623 · Cited by 337
Metadata
- Authors
- Kibbe, W. A.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2007-05-08
- Volume
- 35
- Issue
- Web Server
- Pages
- W43-W46
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2163451322
- Cited by
- 1,296
- References
- 3
- FWCI
- 10.90
- Type
- journal article
- Language
- en
- Open access
- gold
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