Cited by 234RNA and protein synthesis mechanismsGenomics and Phylogenetic StudiesChromosomal and Genetic Variations

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Paired sequence difference in ribosomal RNAs: evolutionary and phylogenetic implications.

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Ward C. Wheeler, Rodney L. Honeycutt·1988·Molecular Biology and Evolution

DOI 10.1093/oxfordjournals.molbev.a040480

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Abstract

Ribosomal RNAs have secondary structures that are maintained by internal Watson-Crick pairing. Through analysis of chordate, arthropod, and plant 5S ribosomal RNA sequences, we show that Darwinian selection operates on these nucleotide sequences to maintain functionally important secondary structure. Insect phylogenies based on nucleotide positions involved in pairing and the production of secondary structure are incongruent with those constructed on the basis of positions that are not. Furthermore, phylogeny reconstruction using these nonpairing bases is concordant with other, morphological data.

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Authors: Wheeler, W. C., & Honeycutt, R. L.
Affiliations: Harvard University (US)
ORCID: Ward C. Wheeler
Rodney L. Honeycutt
Venue: Molecular Biology and Evolution
Publisher: Oxford University Press (OUP)
Published: 1988-01
Volume: 5
Issue: 1
Pages: 90-6
ISSN: 0737-4038 (ISSN-L)
1537-1719
DOI: 10.1093/oxfordjournals.molbev.a040480
OpenAlex: W1918720391
Cited by: 234
References: 12
Citations by year: 2025: 1 · 2022: 3 · 2021: 2 · 2020: 3 · 2019: 1 · 2018: 1 · 2017: 3 · 2016: 2 · 2015: 4 · 2014: 3 · 2013: 1 · 2012: 3
FWCI: 2.90
Type: journal article
Language: en
Open access: bronze
doi.org
Locations: Molecular Biology and Evolution (publishedVersion)
PubMed (publishedVersion)
Funders: National Science Foundation
Topics: Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Chromosomal and Genetic Variations
Keywords: ribosomal RNA, 5S rRNA, Watson-Crick base pairing, secondary structure, phylogenetic incongruence, insect phylogeny, Chordata, arthropods, plants, nucleotide selection, phylogenetic inference
MeSH terms: Animals, Base Sequence, Biological Evolution, Invertebrates, Models, Genetic, Nucleic Acid Conformation, Phylogeny, Plants, RNA, Ribosomal

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Paired sequence difference in ribosomal RNAs: evolutionary and phylogenetic implications.

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