PreprintCited by 4Microtubule and mitosis dynamicsCancer Treatment and PharmacologyGenetic and Kidney Cyst Diseases

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A tubulin-binding protein that preferentially binds to GDP-tubulin and promotes GTP exchange

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Yon, Wesley J., Ha, Taekjip, Zheng, Yixian, Pedersen, Ross T.A.·2023·Journal of Biological Chemistry

Preprint — published as 10.1016/j.jbc.2025.110401 · Paper page

Abstract

α- and β-tubulin form heterodimers, with GTPase activity, that assemble into microtubules. Like other GTPases, the nucleotide-bound state of tubulin heterodimers controls whether the molecules are in a biologically active or inactive state. While α-tubulin in the heterodimer is constitutively bound to GTP, β-tubulin can be bound to either GDP (GDP-tubulin) or GTP (GTP-tubulin). GTP-tubulin hydrolyzes its GTP to GDP following assembly into a microtubule and, upon disassembly, must exchange its bound GDP for GTP to participate in subsequent microtubule polymerization. Tubulin dimers have been shown to exhibit rapid intrinsic nucleotide exchange in vitro, leading to a commonly accepted belief that a tubulin guanine nucleotide exchange factor (GEF) may be unnecessary in cells. Here, we use quantitative binding assays to show that BuGZ, a spindle assembly factor, binds tightly to GDP-tubulin, less tightly to GTP-tubulin, and weakly to microtubules. We further show that BuGZ promotes the incorporation of GTP into tubulin using a nucleotide exchange assay. The discovery of a tubulin GEF suggests a mechanism that may aid rapid microtubule assembly dynamics in cells.

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Research works printed but not linked: 47

  1. 10.1016/j.cell.2014.03.053 · DOI · Paper page
  2. 10.1126/science.1221698 · DOI
  3. 10.1093/emboj/17.13.3651 · DOI
  4. 10.1038/354080a0 · DOI
  5. 10.1093/biomethods/bpab024 · DOI
  6. 10.1073/pnas.1505995112 · DOI
  7. 10.1016/j.cell.2007.05.018 · DOI · Paper page
  8. 10.1016/s0021-9258(18)33113-2 · DOI
  9. 10.1083/jcb.115.3.717 · DOI · Paper page
  10. 10.1126/science.8493579 · DOI
  11. 10.1101/2024.01.23.576869 · DOI
  12. 10.1146/annurev.cellbio.13.1.83 · DOI
  13. 10.1091/mbc.E04-12-1106 · DOI
  14. 10.1016/j.bbrc.2004.11.138 · DOI
  15. 10.1152/ajprenal.00023.2023 · DOI
  16. 10.1038/s41598-020-62874-3 · DOI
  17. 10.1016/j.cub.2020.05.056 · DOI
  18. 10.1101/cshperspect.a022608 · DOI
  19. 10.1038/s41580-021-00399-x · DOI
  20. 10.3389/fpls.2014.00511 · DOI
  21. 10.1083/jcb.201706103 · DOI
  22. 10.1016/0022-2836(74)90475-6 · DOI
  23. 10.1016/j.devcel.2013.12.013 · DOI
  24. 10.1016/j.cell.2015.08.010 · DOI
  25. 10.1074/jbc.RA119.008653 · DOI
  26. 10.1038/s41467-019-14087-0 · DOI
  27. 10.1038/s41556-018-0038-y · DOI
  28. 10.1080/21541248.2016.1156803 · DOI
  29. 10.1016/j.ymeth.2012.06.014 · DOI · Paper page
  30. 10.1038/s41467-021-24727-z · DOI
  31. 10.1038/nsb0698-451 · DOI
  32. 10.1038/34465 · DOI
  33. 10.1016/S0006-3495(97)78050-0 · DOI
  34. 10.1038/s41580-018-0004-3 · DOI
  35. 10.1083/jcb.99.6.2175 · DOI
  36. 10.1038/277665a0 · DOI · Paper page
  37. 10.1083/jcb.202308152 · DOI
  38. 10.1074/jbc.M109.068247 · DOI
  39. 10.1016/0076-6879(95)56010-6 · DOI
  40. 10.1016/j.bbapap.2022.140869 · DOI
  41. 10.1074/jbc.M002597200 · DOI
  42. 10.1007/BF00928361 · DOI · Paper page
  43. 10.1126/science.1062023 · DOI · Paper page
  44. 10.1016/j.ceb.2019.03.017 · DOI
  45. 10.1016/j.cell.2017.05.028 · DOI
  46. 10.1016/j.cub.2016.04.069 · DOI
  47. 10.1038/nrm2919 · DOI

Metadata

Authors
Yon, W. J., Ha, T., Zheng, Y., & Pedersen, R. T. A.
Affiliations
  • Johns Hopkins University (US)
  • Boston Children's Hospital (US)
  • Carnegie Institution for Science (US)
Corresponding author
Zheng, Yixian
Venue
Journal of Biological Chemistry
Publisher
openRxiv
Published
2023-05-09
Volume
301
Issue
8
Pages
110401-110401
ISSN
0021-9258 (ISSN-L)
OpenAlex
W4411443056
Cited by
4
References
1
Citations by year
2026: 4
FWCI
2.00
Type
journal article
Language
en
Open access
Licence
cc-by
Locations
  • Journal of Biological Chemistry (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • PubMed Central (submittedVersion, cc-by-nc-nd)
Funders
  • Carnegie Institution of Washington
  • Johns Hopkins University
  • National Institutes of Health (GM 122569)
  • National Institute of General Medical Sciences (GM106023, GM110151, R01GM106023, F32GM142145, GM122569, R01GM110151, R35GM122569)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
  • Health Sciences › Medicine › Oncology › Cancer Treatment and Pharmacology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and Kidney Cyst Diseases
Keywords
GDP-tubulin, tubulin heterodimers, nucleotide exchange, microtubule assembly, microtubule disassembly, spindle assembly, GTP hydrolysis

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